| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318332
Identifier: 158318332
GI number: 158318332
Start: 8026818
End: 8028143
Strand: Reverse
Name: 158318332
Synonym: Franean1_6597
Alternate gene names: NA
Gene position: 8028143-8026818 (Counterclockwise)
Preceding gene: 158318335
Following gene: 158318331
Centisome position: 89.38
GC content: 73.3
Gene sequence:
>1326_bases ATGTCGCGAGGACCGGACCGGTTTCGCGCGGCGGAAGGTGTGCGTGGCGCGCTGTGGCGATCGCTCGCCGTCTTCCGCCT GGTGGCGGCGGCCTACGCCGTCGCGACGGTCGGGCTCGATCTGGGCCAGACGCCGCACCCGGGGCGTGGCCTCGCCTGGT TCGGTGTGCTGGCGGTCTGGTCGGTTGTCATGTCGTGGCTCGCGCCGGCGGCCGACGGGTGGCGGCCGTGGCGGCGGTAT GGCCTGGTTGTGGCCGATGTCGTGGTCTGTGTTGCCATGATGCTGACGTGCGGTGTGGTGAGCCCGGCCGGGTCCACGGA CGTCCTGCCCGCGCTGTGGACGGCGAGCGGCGTGTTCAGCGCCGCGCTGGCCGGCGGAACCGCGGGCGGGGCCGCCGGCG GTTCGGCACTGGCCGTGGCCTCCTTCGTCGCCAGCGGTTCGGTGAGCGACTCCTCAGTCAGGCCGGCGGTCCTGTTCGTC GTGTCGGGAATCGTCGTCGGCTATCTGAGCCGGACTGCCATTCGCGCCGAGTCCGCGCTGGCCGACGTGCTGGCGGCGCG GGCCGGGGACGCCGAGCGGGAGCGTCTCGCCCGAGGCGTCCACGACAGCGTGCTCCAGGTTCTGTCGTTGATCGCGCGCG AGGCGCAGCGCGGTATGGCGGCGGCCGACGTCGCCAGGCTCGCCGCCGCCCAGGAATCGGCGCTGCGTGATCTCCTACGT ACCCCCGGAACCTCTCAGCCCGTCGAGCTGGGACGTCCGACCGGACGCGAGACGGGACCAGGCCGCAAGGATGCGGCAGG CCGCAGGGGTGCAGGCCGTGGGGGTGGATCGGCGCGGCTCGCCCGTCCCGAAGCGGATCTTGAGCCACTGCTGACGGGTC TGGCGCGGATGTCACGTTCGACGACCGCGGCGGGACGGGTGATCCCGCCCGGCCCTGCCTTGTCCGGGATGATCTCCGGC CCGTCGGCCGAGGACATGCCGGCGGTCGTGACGGTCTCCACCCCGGGCGCGCCGGTACCGCTACCGGCGGATCACGCCGA CGAGGTTGTCGCCGCCGTCCGAGCTGCGTTGAACAACGTGGCCACGCACGCCGGACCCGGAGCCTCGGCGTGGCTGCTGC TCGAGGACGACGGCGACTCGGTGACCGTGACCGTCCGCGACGACGGGATCGGCATCGAACCTGGACGGGCCGAGCAGGCT GCCGCGGAGGGCCGGCTCGGTCTCGCGGTCTCCGTTTGCGGACGGATCCGGGATCTCGGTGGCGACGTCGTCGTCACCGG CCGTCCCGGCCAGGGGACGGAGGTCGAGCTTCGTGTCCCGCGGTGA
Upstream 100 bases:
>100_bases GAATGGGTCATGGGCCCAGTCTCGGCTCGTTGGAGCCGGCTGGCCTGAGTAACCGTACTCATCTCGAACCTGGACTTTCT GCCACACTTGCCGGGTGCGG
Downstream 100 bases:
>100_bases CGATGACGACGGAGTCCCCGGGGTTGACGAGTCCAACGGGGCGCGTCGCGGCGGCCGCGTGGTCGTCGTAGACGACCATC CGCTGTGGCGCGAGGCGCTG
Product: putative signal transduction histidine kinase
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase; Two-Component Sensor Kinase; Sensor Kinase Two-Component System; LOW QUALITY PROTEIN Two-Component System Sensor Kinase; Two-Component System Histidine Kinase; Two-Component Histidine Kinase; Signal Transduction Histidine Kinase-Like Protein
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSRGPDRFRAAEGVRGALWRSLAVFRLVAAAYAVATVGLDLGQTPHPGRGLAWFGVLAVWSVVMSWLAPAADGWRPWRRY GLVVADVVVCVAMMLTCGVVSPAGSTDVLPALWTASGVFSAALAGGTAGGAAGGSALAVASFVASGSVSDSSVRPAVLFV VSGIVVGYLSRTAIRAESALADVLAARAGDAERERLARGVHDSVLQVLSLIAREAQRGMAAADVARLAAAQESALRDLLR TPGTSQPVELGRPTGRETGPGRKDAAGRRGAGRGGGSARLARPEADLEPLLTGLARMSRSTTAAGRVIPPGPALSGMISG PSAEDMPAVVTVSTPGAPVPLPADHADEVVAAVRAALNNVATHAGPGASAWLLLEDDGDSVTVTVRDDGIGIEPGRAEQA AAEGRLGLAVSVCGRIRDLGGDVVVTGRPGQGTEVELRVPR
Sequences:
>Translated_441_residues MSRGPDRFRAAEGVRGALWRSLAVFRLVAAAYAVATVGLDLGQTPHPGRGLAWFGVLAVWSVVMSWLAPAADGWRPWRRY GLVVADVVVCVAMMLTCGVVSPAGSTDVLPALWTASGVFSAALAGGTAGGAAGGSALAVASFVASGSVSDSSVRPAVLFV VSGIVVGYLSRTAIRAESALADVLAARAGDAERERLARGVHDSVLQVLSLIAREAQRGMAAADVARLAAAQESALRDLLR TPGTSQPVELGRPTGRETGPGRKDAAGRRGAGRGGGSARLARPEADLEPLLTGLARMSRSTTAAGRVIPPGPALSGMISG PSAEDMPAVVTVSTPGAPVPLPADHADEVVAAVRAALNNVATHAGPGASAWLLLEDDGDSVTVTVRDDGIGIEPGRAEQA AAEGRLGLAVSVCGRIRDLGGDVVVTGRPGQGTEVELRVPR >Mature_440_residues SRGPDRFRAAEGVRGALWRSLAVFRLVAAAYAVATVGLDLGQTPHPGRGLAWFGVLAVWSVVMSWLAPAADGWRPWRRYG LVVADVVVCVAMMLTCGVVSPAGSTDVLPALWTASGVFSAALAGGTAGGAAGGSALAVASFVASGSVSDSSVRPAVLFVV SGIVVGYLSRTAIRAESALADVLAARAGDAERERLARGVHDSVLQVLSLIAREAQRGMAAADVARLAAAQESALRDLLRT PGTSQPVELGRPTGRETGPGRKDAAGRRGAGRGGGSARLARPEADLEPLLTGLARMSRSTTAAGRVIPPGPALSGMISGP SAEDMPAVVTVSTPGAPVPLPADHADEVVAAVRAALNNVATHAGPGASAWLLLEDDGDSVTVTVRDDGIGIEPGRAEQAA AEGRLGLAVSVCGRIRDLGGDVVVTGRPGQGTEVELRVPR
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44684; Mature: 44553
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGPDRFRAAEGVRGALWRSLAVFRLVAAAYAVATVGLDLGQTPHPGRGLAWFGVLAVW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH SVVMSWLAPAADGWRPWRRYGLVVADVVVCVAMMLTCGVVSPAGSTDVLPALWTASGVFS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AALAGGTAGGAAGGSALAVASFVASGSVSDSSVRPAVLFVVSGIVVGYLSRTAIRAESAL HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADVLAARAGDAERERLARGVHDSVLQVLSLIAREAQRGMAAADVARLAAAQESALRDLLR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH TPGTSQPVELGRPTGRETGPGRKDAAGRRGAGRGGGSARLARPEADLEPLLTGLARMSRS CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC TTAAGRVIPPGPALSGMISGPSAEDMPAVVTVSTPGAPVPLPADHADEVVAAVRAALNNV HHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH ATHAGPGASAWLLLEDDGDSVTVTVRDDGIGIEPGRAEQAAAEGRLGLAVSVCGRIRDLG HHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCC GDVVVTGRPGQGTEVELRVPR CCEEEECCCCCCCEEEEECCC >Mature Secondary Structure SRGPDRFRAAEGVRGALWRSLAVFRLVAAAYAVATVGLDLGQTPHPGRGLAWFGVLAVW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH SVVMSWLAPAADGWRPWRRYGLVVADVVVCVAMMLTCGVVSPAGSTDVLPALWTASGVFS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AALAGGTAGGAAGGSALAVASFVASGSVSDSSVRPAVLFVVSGIVVGYLSRTAIRAESAL HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADVLAARAGDAERERLARGVHDSVLQVLSLIAREAQRGMAAADVARLAAAQESALRDLLR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH TPGTSQPVELGRPTGRETGPGRKDAAGRRGAGRGGGSARLARPEADLEPLLTGLARMSRS CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC TTAAGRVIPPGPALSGMISGPSAEDMPAVVTVSTPGAPVPLPADHADEVVAAVRAALNNV HHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH ATHAGPGASAWLLLEDDGDSVTVTVRDDGIGIEPGRAEQAAAEGRLGLAVSVCGRIRDLG HHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCC GDVVVTGRPGQGTEVELRVPR CCEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA