| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318335
Identifier: 158318335
GI number: 158318335
Start: 8029777
End: 8034978
Strand: Reverse
Name: 158318335
Synonym: Franean1_6600
Alternate gene names: NA
Gene position: 8034978-8029777 (Counterclockwise)
Preceding gene: 158318338
Following gene: 158318332
Centisome position: 89.46
GC content: 71.61
Gene sequence:
>5202_bases ATGGCCCGGGAGGATGCCGACGCGCCGGCCGGGCGGACCTGGCGGGCTACGGAGCCGGGCGGGTTGACGGTCGTGCCACG CCAACCCGCCCCAGACACCGGCAGTGTCGCTTTCCCCGGTCTGTGGTTCGGCGTGCTCGGGCCGTTGGAGGTGCGTAGCG ACGGTCGCCCACTGGCGCTGCGGGGGCCGCGAGAACGTGCGTTGCTGGGCCTGTTGCTGGCGGAACGTAATCGGGCTGTT TCGGTCTCGCGGCTGGTTGACGGAATTTGGGGGGCGGTGCCGCCGCCGACGGCCGAAAAGACGCTGCAGAGCCATATTTC CCGATTGCGTCGTCTTCTGGAGCCGGAACGCCCGCCAGCGGGTTGGACAGTACTGGTGACGGTGCCTTCCGGGTACAGCC TGCGGGCCGACTTGACTGCCCTTGACTCGGCATTGTTCGAACAACTCGTGGAACAGGCGCGGCGGGCTTTTGCGGTCGGT GCTCCTGAACTTGCCCGCGCTCGGTTCCGGCGGGCGCTGGGATTGTGGCGGGGGGACGCGTACGAGGATCTTCTCGACCT CGAGTTCGCGGCGGCGGAAAGGGACCGGCTTGTCGAACTGCGGCTGGCCGCGGTAGCGGATCAGATCGACGCCGAGTTCG CACTCGGCCGGTCGGCGGCAGTATTCGGTGAGCTGCAGCGGTTGGTTGCCGCCCATCCGTTGCGGGAGCGATTCCGTAGC CAGCTGATGATCGCGCTGTACGAATCGGGCCGCCAGGCCGACGCGCTGGAGGCCTACCGGTCGGCGCGGGCCCGGCTGGT GGCGGAGATCGGCGTGGAGCCGGGCCGGCAGCTTCGAGCGTTGAACGCGGCCATTCTCGAGGAGCAGCCCAGCCTGCTCC CGGACATCGTGCAACCGCAGCGCCTTCCGGCGGCGTTGGGTGTCGATCGCCGTGCATTGATCGGTCGGGACGTGGAGATG CGCTGGCTCGAGCGCGTCTGGGACTGCGTCCTCGACGACCGCGGTGAGGTTGTCGTCGTCCGCGGCGAGCCAGGAATGGG TGTCCGCCGCCTCGTCGCCGAGTTCGCCCGCCGGGTCGCGGGCCGGGGTGCCGCGGTCGTCCTCGGACCGATCGACACCG GGACTCTGACGGGGATCGCACAGGAGCGCCCCGTGCTCATGGTCGTCGACGTCGACGACGACCAGCCGGACACCAGCCCG GGCTGGGCCGCGGTGCAGGCCTCCGCGGTCGCGCGCCTGCCGGTGCTCGTTGTCGTCACCGCCCGACCCGGCGACGGCCC GCCGGAGGTACGGCCCGGCGGGTTCGACGTCGGCGCGCAGTCGGTCCTGCAGCTCGGCCCGCTCGGGTCGGCTCAGGTCA CCGAGATAGTGGCTGGCTACGTCGGTGCAGGCGAGGTGCCGGCCGCGACCGCGGCTGTGATCGAATCCTCCGGCGGCGTC CCGGCCCGGGTGCACGCGGATGCGGCCGACTGGGCGGCCGTCCGAGCCGGCGAACGGGTCGGTCAGCGGGCGGCGCGGGT CGCGACCGATCGATACGACCTGGCCGAGTCGGAACGCGCGATGGTGTCTGACGTGCTCGACCTGCAGCGGGTTAGGCGTC GTCGTGGCGTCGCCGGTCCGGCCGGATCCGTCGGCGGCACAGGAGCCTCGGGCGGCCCGAGCGCGTCGGGCAGCTCAGCT GGCGGCGCCGGCTCGGGTGATGCGGCCGACTTCGGCGCTCCGGTCGGCGCGCCGGGGACGGTTGTCTGCCCGTACAAGGG GCTGGCGCGTTTTGACGAGCAGGACGCTGCCTATTTCTTTGGCCGGGAGCGGCTGATCGCGCAGCTCGTGACCCGCTGCG TCGCGGCACCGCTGCTGGCGGTGGTGGGTGCGTCGGGAAGCGGGAAATCGTCGGTCGTGCGCGCTGGACTGGTGCCGGCG ATCCGCTCCGGCGTACTGCCGGGAAGCGACCGATGGCGGATCCGGCTGCTGCGGGCCGGCACCGTCGAGGCGACCTCGCT GGACGTCGACATGGACCTCGATGGCGATGGCGACGGCGCCGGTGGCAACGAGCTGCTCATTCTGGATCAGTTCGAGGAAG TGTTCACCACACGGTCGCAGGACAGCCAGACCCGTTTGATCGACCAGCTGGTCGACACGCTGGAACGGGGCGACGGCCGG CTGCGCGTCGTTCTCACCGTGCGGGCCGACTACTACGGCCGGTTCGCCGCCCACCCGACGCTTGCCCGCCTGGTCGCTGA CAACAGCGTGCTCGTCGGTCCGATGGTCGTCGACGAGTTGCGGCGCGCGATCGAGGAACCCGCGCTGGTCGCCGGGCTGG AACTCGAGGAGGGGCTCACGGCGGCGGTACTGGCCGACGCCCGTCAGGAGCCTGGCGTGTTGCCGCTGTTGTCGACGGCG CTGCTGGCGACGTGGGAAGGGCGCGACGGCCGGACGTTGCGCGTAGCCACCTACCGTGAGGCCGGCGGTGTGGCCGGAAC GCTGACCAGGCTTGCCGACGGTATGTACGAGAGCCTCGACGCCGCTGGTCAGGCGATCGTGCGGCAGCTGTTTCTGCGCC TCGCGACGCTGGGCGAGGACGGCGACGATCTGCGGCGTCGCGCGCCACGCTCCGAGCTGGTAGGCAGCGCGCCGGTCGAG GCCGTTCTCACGGTGCTGATCGCGCGACGGCTGGTCATCGCCGCGGACGACACGGTCGAGGTCGCGCACGAGGCGTTGCT AAGGGAGTGGCCCCGGCTGCGGGGTTGGCTCGAGACAGACCGCGACGGCCGCCGGGTGCACCGCGAACTGAGCGGGGCAG CCGTGGCGTGGGACGCCGGCGGGCGGAACCCGGCCGACCTTTACGGCGGTCCCCGGCTGGCCGCCGCACAGGACTGGGCC GCGGCCCACCCACGCGACGCCAACCCCCTGGAGGAGGAGTTCCTCGCGGCCGCTGGTGCCGCCCGGGATCGGGCGGCACA GGTCGCTCGACGGACCACCCAGTGGCTGCGGACGCTCGCCGCCGGGTTGGCCGTGCTCCTGGTGGTCGCGCTGATCGCGA CAGGGGTGGCCGTCGGGCAGCGGCACAGGGCCACGCTGCAGGCCGATCGGGCACACAGCGAAGCGGAGCTGGCGCGGGCG AGCCGGCTCGCGGCGGTCACCCGCACCCTTGGCCCCGACCAGATCGACCTTGCCCTGCTGCTGGGCGTCGAGAGCTACCG GCAACAGCCCACGGTCGAGACCGAGGGAAATCTCGAGACCGCGCTCGTCCACACCCCGCCCGGCCTCACTCAGCTGATCC GTTTCAGGTCGCCGAGTTTCTACCCGTCGGTGAGCCCGGACGGACGACTGCTGGCCTCGCCCGGCCAGGACGGCACGGTC GACCTGTGGGATCTGCAGGCCGGCCGGCTGCTGCGCACGTTCACCTGGCCCACCGCACGCCAGGTCGCCATGTTCAGCTC GGACGGGAAGCTGCTCACCGCCGGGGGGAACGACGGGACCGTCGTCGTCTGGGACGCCGTCACCGGACGGCAGGTCGGGG CACCGGTCAAGGTCGCCGGCGGCTTCGTGTACGGCGAGTTCGACCCCACTGACCCATCTCGCCTTTTCGCTGTCAGCGAC ACCGGCGAGGTCGCCATCTGGGACCGGGCCATCCCGGACCGGCCGGTGCAGCTCGGGCCGCCGCTGCGGTTCACGCCGCG GGCCGGCGCGCTCCCGGTGGCGGTCGTCAGCGCTGACGGCCGTCGCCTGGCGGCCGGGACGTCGTCCCCCGACAGCTCGA CGCGGGTGTGGGATCTGGGCTCCCGCACCGTGATACGGGACCTTCCCGGCCTCACCGGATCCTTCAGCCCGGACGGCCGA TCGCTGGCTACCGCGTCCGACGGTCGGGTCGAGGTGTGGGACGTCGCCTCCGGAGACCGGCGGGGCGTGCCGCTGACGGG ACTGACCGGAGCGTTGCCAGGAATCCTCTTCAGTCCGGATGGGCAGCTCGTGGCCGCCGGCGACGGAGGCAACGTCGTCC GGGTGTTCGACCTGGCCTCGGGACTGCAGATCGGCGCTTCCCTCGCCCTGCACACTGGCGGTCCGGCGCTCCCCACCGCC TTTCTTCCCGACGGCCGGGTCGTCACCAGTGGGCCGCACGAGGCCGCGGTCTGGCAGGTGGGTCGTACGACGCCGCCGAT CGGCCTGGTGCTCGGAGGCCATCAGGGTCTGACGTTCGGCACGTTCGTCCCGGGTGGCCAGGAGGTTGTCACCCGCGGCA TCTCCGACAGCGGGCTACGGCGATGGGACGCCGGCACCGGAAGGGAACTCGGCCGGCTGCTCGACGGCCGGGTCCAGGCA CCCGTGACGTTCAGCCCCGACGGCCGTCTGCTCGCCACGGCCGGTGCCGACGACAACCAGCTCGCGCTGTGGGACGCGCG CACCGGCGAACGACTCGCCGGACTCGACGGAACCCGCGGCGGACGACGCAGCTACGCGGACTGGAGCCCGGCCGGAGACC GGATCGTGACCGGCGCCGACGGGTCGGTGCGGATCTGGGACGTCAGCGACCCCCGCCATCCGGCATCGGTCGAGCAGCTG GACCCGGACGGCGAGCCCCATCCGGGCACCCCGGACAGCCAGTGGCCGGTTTTCAGCCATGACGGGCAGTGGATCGCGGT CCATGACTTTCCGGGTCACACGATGACGGTGTTCGACGCGGCGTCAGGTCGCAAACAGTGGTCGACATCGGCGCCCGTGG CGGACCTGGCGGGAATCGCCTTCGCGCCGGACGACAAGACTCTCGCGATCAGCTACGGCGCCCGGGTCGGTGGTCGAGTC TCGTTCCACGACACCGGGACCGGGCACGTGGAGCGGACCCTGCAGATCCCGAGTGGAGGCGGAATTGAGTTCCTCCGGGG TGGCAGTGTCGTGATGACAACGGGCGATTCGGCTGGTAGCAGCGCTGCGCAGTTGTGGGACGCGGCCACCTTCGCACCGA TCGGGGAGCCGCTGCCGCAACCCGAACCGGGCGCGTACTTCATCTCCCGTGACGCCGAGGGCACCCGAGCGGTGGCTGGC TCGCAGAACTCGTTCGCGGTGATCTGGGACGTCGACACCGCACGGTGGCAGACGGTCGCCTGCGGAATCGCTGGACGCAA CCTCACCCGGGCGGAATGGGATCAGTACTTTCCCAACCGGCCGTACAGGCAGACCTGTCCGCAGTGGCCGGCGGGTTCAT GA
Upstream 100 bases:
>100_bases TGCGGCTGGGAGGATGTCGATGCCCGCCACGGAGCGCGGCCGACCGCTGTCGCCTGTCGCGGGGTGAAGGAGCGCGTCGA CGGGGAGGAGACAGCTGCGG
Downstream 100 bases:
>100_bases CGGACGGCGGGCGTCGCGACGCGGGGAGGTGCGGGGCAGTAGCTGGATGATCGCCTCGCGCACCGCCGGGACGATCTCTC GTGCCCACCTGCTCAGCGCA
Product: transcriptional activator domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1733; Mature: 1732
Protein sequence:
>1733_residues MAREDADAPAGRTWRATEPGGLTVVPRQPAPDTGSVAFPGLWFGVLGPLEVRSDGRPLALRGPRERALLGLLLAERNRAV SVSRLVDGIWGAVPPPTAEKTLQSHISRLRRLLEPERPPAGWTVLVTVPSGYSLRADLTALDSALFEQLVEQARRAFAVG APELARARFRRALGLWRGDAYEDLLDLEFAAAERDRLVELRLAAVADQIDAEFALGRSAAVFGELQRLVAAHPLRERFRS QLMIALYESGRQADALEAYRSARARLVAEIGVEPGRQLRALNAAILEEQPSLLPDIVQPQRLPAALGVDRRALIGRDVEM RWLERVWDCVLDDRGEVVVVRGEPGMGVRRLVAEFARRVAGRGAAVVLGPIDTGTLTGIAQERPVLMVVDVDDDQPDTSP GWAAVQASAVARLPVLVVVTARPGDGPPEVRPGGFDVGAQSVLQLGPLGSAQVTEIVAGYVGAGEVPAATAAVIESSGGV PARVHADAADWAAVRAGERVGQRAARVATDRYDLAESERAMVSDVLDLQRVRRRRGVAGPAGSVGGTGASGGPSASGSSA GGAGSGDAADFGAPVGAPGTVVCPYKGLARFDEQDAAYFFGRERLIAQLVTRCVAAPLLAVVGASGSGKSSVVRAGLVPA IRSGVLPGSDRWRIRLLRAGTVEATSLDVDMDLDGDGDGAGGNELLILDQFEEVFTTRSQDSQTRLIDQLVDTLERGDGR LRVVLTVRADYYGRFAAHPTLARLVADNSVLVGPMVVDELRRAIEEPALVAGLELEEGLTAAVLADARQEPGVLPLLSTA LLATWEGRDGRTLRVATYREAGGVAGTLTRLADGMYESLDAAGQAIVRQLFLRLATLGEDGDDLRRRAPRSELVGSAPVE AVLTVLIARRLVIAADDTVEVAHEALLREWPRLRGWLETDRDGRRVHRELSGAAVAWDAGGRNPADLYGGPRLAAAQDWA AAHPRDANPLEEEFLAAAGAARDRAAQVARRTTQWLRTLAAGLAVLLVVALIATGVAVGQRHRATLQADRAHSEAELARA SRLAAVTRTLGPDQIDLALLLGVESYRQQPTVETEGNLETALVHTPPGLTQLIRFRSPSFYPSVSPDGRLLASPGQDGTV DLWDLQAGRLLRTFTWPTARQVAMFSSDGKLLTAGGNDGTVVVWDAVTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSD TGEVAIWDRAIPDRPVQLGPPLRFTPRAGALPVAVVSADGRRLAAGTSSPDSSTRVWDLGSRTVIRDLPGLTGSFSPDGR SLATASDGRVEVWDVASGDRRGVPLTGLTGALPGILFSPDGQLVAAGDGGNVVRVFDLASGLQIGASLALHTGGPALPTA FLPDGRVVTSGPHEAAVWQVGRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDGRVQA PVTFSPDGRLLATAGADDNQLALWDARTGERLAGLDGTRGGRRSYADWSPAGDRIVTGADGSVRIWDVSDPRHPASVEQL DPDGEPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVFDAASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGGRV SFHDTGTGHVERTLQIPSGGGIEFLRGGSVVMTTGDSAGSSAAQLWDAATFAPIGEPLPQPEPGAYFISRDAEGTRAVAG SQNSFAVIWDVDTARWQTVACGIAGRNLTRAEWDQYFPNRPYRQTCPQWPAGS
Sequences:
>Translated_1733_residues MAREDADAPAGRTWRATEPGGLTVVPRQPAPDTGSVAFPGLWFGVLGPLEVRSDGRPLALRGPRERALLGLLLAERNRAV SVSRLVDGIWGAVPPPTAEKTLQSHISRLRRLLEPERPPAGWTVLVTVPSGYSLRADLTALDSALFEQLVEQARRAFAVG APELARARFRRALGLWRGDAYEDLLDLEFAAAERDRLVELRLAAVADQIDAEFALGRSAAVFGELQRLVAAHPLRERFRS QLMIALYESGRQADALEAYRSARARLVAEIGVEPGRQLRALNAAILEEQPSLLPDIVQPQRLPAALGVDRRALIGRDVEM RWLERVWDCVLDDRGEVVVVRGEPGMGVRRLVAEFARRVAGRGAAVVLGPIDTGTLTGIAQERPVLMVVDVDDDQPDTSP GWAAVQASAVARLPVLVVVTARPGDGPPEVRPGGFDVGAQSVLQLGPLGSAQVTEIVAGYVGAGEVPAATAAVIESSGGV PARVHADAADWAAVRAGERVGQRAARVATDRYDLAESERAMVSDVLDLQRVRRRRGVAGPAGSVGGTGASGGPSASGSSA GGAGSGDAADFGAPVGAPGTVVCPYKGLARFDEQDAAYFFGRERLIAQLVTRCVAAPLLAVVGASGSGKSSVVRAGLVPA IRSGVLPGSDRWRIRLLRAGTVEATSLDVDMDLDGDGDGAGGNELLILDQFEEVFTTRSQDSQTRLIDQLVDTLERGDGR LRVVLTVRADYYGRFAAHPTLARLVADNSVLVGPMVVDELRRAIEEPALVAGLELEEGLTAAVLADARQEPGVLPLLSTA LLATWEGRDGRTLRVATYREAGGVAGTLTRLADGMYESLDAAGQAIVRQLFLRLATLGEDGDDLRRRAPRSELVGSAPVE AVLTVLIARRLVIAADDTVEVAHEALLREWPRLRGWLETDRDGRRVHRELSGAAVAWDAGGRNPADLYGGPRLAAAQDWA AAHPRDANPLEEEFLAAAGAARDRAAQVARRTTQWLRTLAAGLAVLLVVALIATGVAVGQRHRATLQADRAHSEAELARA SRLAAVTRTLGPDQIDLALLLGVESYRQQPTVETEGNLETALVHTPPGLTQLIRFRSPSFYPSVSPDGRLLASPGQDGTV DLWDLQAGRLLRTFTWPTARQVAMFSSDGKLLTAGGNDGTVVVWDAVTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSD TGEVAIWDRAIPDRPVQLGPPLRFTPRAGALPVAVVSADGRRLAAGTSSPDSSTRVWDLGSRTVIRDLPGLTGSFSPDGR SLATASDGRVEVWDVASGDRRGVPLTGLTGALPGILFSPDGQLVAAGDGGNVVRVFDLASGLQIGASLALHTGGPALPTA FLPDGRVVTSGPHEAAVWQVGRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDGRVQA PVTFSPDGRLLATAGADDNQLALWDARTGERLAGLDGTRGGRRSYADWSPAGDRIVTGADGSVRIWDVSDPRHPASVEQL DPDGEPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVFDAASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGGRV SFHDTGTGHVERTLQIPSGGGIEFLRGGSVVMTTGDSAGSSAAQLWDAATFAPIGEPLPQPEPGAYFISRDAEGTRAVAG SQNSFAVIWDVDTARWQTVACGIAGRNLTRAEWDQYFPNRPYRQTCPQWPAGS >Mature_1732_residues AREDADAPAGRTWRATEPGGLTVVPRQPAPDTGSVAFPGLWFGVLGPLEVRSDGRPLALRGPRERALLGLLLAERNRAVS VSRLVDGIWGAVPPPTAEKTLQSHISRLRRLLEPERPPAGWTVLVTVPSGYSLRADLTALDSALFEQLVEQARRAFAVGA PELARARFRRALGLWRGDAYEDLLDLEFAAAERDRLVELRLAAVADQIDAEFALGRSAAVFGELQRLVAAHPLRERFRSQ LMIALYESGRQADALEAYRSARARLVAEIGVEPGRQLRALNAAILEEQPSLLPDIVQPQRLPAALGVDRRALIGRDVEMR WLERVWDCVLDDRGEVVVVRGEPGMGVRRLVAEFARRVAGRGAAVVLGPIDTGTLTGIAQERPVLMVVDVDDDQPDTSPG WAAVQASAVARLPVLVVVTARPGDGPPEVRPGGFDVGAQSVLQLGPLGSAQVTEIVAGYVGAGEVPAATAAVIESSGGVP ARVHADAADWAAVRAGERVGQRAARVATDRYDLAESERAMVSDVLDLQRVRRRRGVAGPAGSVGGTGASGGPSASGSSAG GAGSGDAADFGAPVGAPGTVVCPYKGLARFDEQDAAYFFGRERLIAQLVTRCVAAPLLAVVGASGSGKSSVVRAGLVPAI RSGVLPGSDRWRIRLLRAGTVEATSLDVDMDLDGDGDGAGGNELLILDQFEEVFTTRSQDSQTRLIDQLVDTLERGDGRL RVVLTVRADYYGRFAAHPTLARLVADNSVLVGPMVVDELRRAIEEPALVAGLELEEGLTAAVLADARQEPGVLPLLSTAL LATWEGRDGRTLRVATYREAGGVAGTLTRLADGMYESLDAAGQAIVRQLFLRLATLGEDGDDLRRRAPRSELVGSAPVEA VLTVLIARRLVIAADDTVEVAHEALLREWPRLRGWLETDRDGRRVHRELSGAAVAWDAGGRNPADLYGGPRLAAAQDWAA AHPRDANPLEEEFLAAAGAARDRAAQVARRTTQWLRTLAAGLAVLLVVALIATGVAVGQRHRATLQADRAHSEAELARAS RLAAVTRTLGPDQIDLALLLGVESYRQQPTVETEGNLETALVHTPPGLTQLIRFRSPSFYPSVSPDGRLLASPGQDGTVD LWDLQAGRLLRTFTWPTARQVAMFSSDGKLLTAGGNDGTVVVWDAVTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSDT GEVAIWDRAIPDRPVQLGPPLRFTPRAGALPVAVVSADGRRLAAGTSSPDSSTRVWDLGSRTVIRDLPGLTGSFSPDGRS LATASDGRVEVWDVASGDRRGVPLTGLTGALPGILFSPDGQLVAAGDGGNVVRVFDLASGLQIGASLALHTGGPALPTAF LPDGRVVTSGPHEAAVWQVGRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDGRVQAP VTFSPDGRLLATAGADDNQLALWDARTGERLAGLDGTRGGRRSYADWSPAGDRIVTGADGSVRIWDVSDPRHPASVEQLD PDGEPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVFDAASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGGRVS FHDTGTGHVERTLQIPSGGGIEFLRGGSVVMTTGDSAGSSAAQLWDAATFAPIGEPLPQPEPGAYFISRDAEGTRAVAGS QNSFAVIWDVDTARWQTVACGIAGRNLTRAEWDQYFPNRPYRQTCPQWPAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 13 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI113865883, Length=268, Percent_Identity=29.8507462686567, Blast_Score=80, Evalue=3e-14, Organism=Homo sapiens, GI32189425, Length=241, Percent_Identity=28.6307053941909, Blast_Score=78, Evalue=7e-14, Organism=Homo sapiens, GI62234461, Length=351, Percent_Identity=26.4957264957265, Blast_Score=77, Evalue=2e-13, Organism=Homo sapiens, GI48928050, Length=244, Percent_Identity=27.4590163934426, Blast_Score=68, Evalue=9e-11, Organism=Homo sapiens, GI48928048, Length=244, Percent_Identity=27.4590163934426, Blast_Score=68, Evalue=9e-11, Organism=Homo sapiens, GI48928046, Length=244, Percent_Identity=27.4590163934426, Blast_Score=68, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17552164, Length=275, Percent_Identity=25.0909090909091, Blast_Score=75, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17563260, Length=270, Percent_Identity=26.2962962962963, Blast_Score=70, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71995913, Length=270, Percent_Identity=26.2962962962963, Blast_Score=70, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17568701, Length=283, Percent_Identity=26.8551236749117, Blast_Score=70, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319675, Length=225, Percent_Identity=30.6666666666667, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR011600 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]
EC number: NA
Molecular weight: Translated: 183220; Mature: 183089
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00678 WD_REPEATS_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREDADAPAGRTWRATEPGGLTVVPRQPAPDTGSVAFPGLWFGVLGPLEVRSDGRPLAL CCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEECCHHHHHHCCCEEECCCCCEEEE RGPRERALLGLLLAERNRAVSVSRLVDGIWGAVPPPTAEKTLQSHISRLRRLLEPERPPA CCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC GWTVLVTVPSGYSLRADLTALDSALFEQLVEQARRAFAVGAPELARARFRRALGLWRGDA CEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH YEDLLDLEFAAAERDRLVELRLAAVADQIDAEFALGRSAAVFGELQRLVAAHPLRERFRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QLMIALYESGRQADALEAYRSARARLVAEIGVEPGRQLRALNAAILEEQPSLLPDIVQPQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCC RLPAALGVDRRALIGRDVEMRWLERVWDCVLDDRGEVVVVRGEPGMGVRRLVAEFARRVA CCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH GRGAAVVLGPIDTGTLTGIAQERPVLMVVDVDDDQPDTSPGWAAVQASAVARLPVLVVVT CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEE ARPGDGPPEVRPGGFDVGAQSVLQLGPLGSAQVTEIVAGYVGAGEVPAATAAVIESSGGV ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHEECCCCC PARVHADAADWAAVRAGERVGQRAARVATDRYDLAESERAMVSDVLDLQRVRRRRGVAGP CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGSVGGTGASGGPSASGSSAGGAGSGDAADFGAPVGAPGTVVCPYKGLARFDEQDAAYFF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCCHHHHH GRERLIAQLVTRCVAAPLLAVVGASGSGKSSVVRAGLVPAIRSGVLPGSDRWRIRLLRAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC TVEATSLDVDMDLDGDGDGAGGNELLILDQFEEVFTTRSQDSQTRLIDQLVDTLERGDGR CEEEEEEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCCE LRVVLTVRADYYGRFAAHPTLARLVADNSVLVGPMVVDELRRAIEEPALVAGLELEEGLT EEEEEEEECCCCCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHCCCCEEECCCHHCCCH AAVLADARQEPGVLPLLSTALLATWEGRDGRTLRVATYREAGGVAGTLTRLADGMYESLD HHHHHHHCCCCCCHHHHHHHHHEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH AAGQAIVRQLFLRLATLGEDGDDLRRRAPRSELVGSAPVEAVLTVLIARRLVIAADDTVE HHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHEEEECCCHHH VAHEALLREWPRLRGWLETDRDGRRVHRELSGAAVAWDAGGRNPADLYGGPRLAAAQDWA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCCCCCHH AAHPRDANPLEEEFLAAAGAARDRAAQVARRTTQWLRTLAAGLAVLLVVALIATGVAVGQ CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHRATLQADRAHSEAELARASRLAAVTRTLGPDQIDLALLLGVESYRQQPTVETEGNLET HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHEECHHHHHCCCCCCCCCCEEE ALVHTPPGLTQLIRFRSPSFYPSVSPDGRLLASPGQDGTVDLWDLQAGRLLRTFTWPTAR EEEECCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCHH QVAMFSSDGKLLTAGGNDGTVVVWDAVTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSD EEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCEEEECEEEEECCCCCCCCEEEEECC TGEVAIWDRAIPDRPVQLGPPLRFTPRAGALPVAVVSADGRRLAAGTSSPDSSTRVWDLG CCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEECC SRTVIRDLPGLTGSFSPDGRSLATASDGRVEVWDVASGDRRGVPLTGLTGALPGILFSPD CCHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHCCCCEEECCC GQLVAAGDGGNVVRVFDLASGLQIGASLALHTGGPALPTAFLPDGRVVTSGPHEAAVWQV CCEEEECCCCCEEEEEECCCCHHHCCEEEEECCCCCCCEEECCCCCEEECCCCCCEEEEC GRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDGRVQA CCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PVTFSPDGRLLATAGADDNQLALWDARTGERLAGLDGTRGGRRSYADWSPAGDRIVTGAD CEEECCCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCC GSVRIWDVSDPRHPASVEQLDPDGEPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVFDA CCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEC ASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGGRVSFHDTGTGHVERTLQIPSGG CCCCCCCCCCCCHHHHCCCEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCC GIEFLRGGSVVMTTGDSAGSSAAQLWDAATFAPIGEPLPQPEPGAYFISRDAEGTRAVAG CEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEECC SQNSFAVIWDVDTARWQTVACGIAGRNLTRAEWDQYFPNRPYRQTCPQWPAGS CCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHCCCCCCCCC >Mature Secondary Structure AREDADAPAGRTWRATEPGGLTVVPRQPAPDTGSVAFPGLWFGVLGPLEVRSDGRPLAL CCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEECCHHHHHHCCCEEECCCCCEEEE RGPRERALLGLLLAERNRAVSVSRLVDGIWGAVPPPTAEKTLQSHISRLRRLLEPERPPA CCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC GWTVLVTVPSGYSLRADLTALDSALFEQLVEQARRAFAVGAPELARARFRRALGLWRGDA CEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH YEDLLDLEFAAAERDRLVELRLAAVADQIDAEFALGRSAAVFGELQRLVAAHPLRERFRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QLMIALYESGRQADALEAYRSARARLVAEIGVEPGRQLRALNAAILEEQPSLLPDIVQPQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCC RLPAALGVDRRALIGRDVEMRWLERVWDCVLDDRGEVVVVRGEPGMGVRRLVAEFARRVA CCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH GRGAAVVLGPIDTGTLTGIAQERPVLMVVDVDDDQPDTSPGWAAVQASAVARLPVLVVVT CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEE ARPGDGPPEVRPGGFDVGAQSVLQLGPLGSAQVTEIVAGYVGAGEVPAATAAVIESSGGV ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHEECCCCC PARVHADAADWAAVRAGERVGQRAARVATDRYDLAESERAMVSDVLDLQRVRRRRGVAGP CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGSVGGTGASGGPSASGSSAGGAGSGDAADFGAPVGAPGTVVCPYKGLARFDEQDAAYFF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHCCCCCHHHHH GRERLIAQLVTRCVAAPLLAVVGASGSGKSSVVRAGLVPAIRSGVLPGSDRWRIRLLRAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC TVEATSLDVDMDLDGDGDGAGGNELLILDQFEEVFTTRSQDSQTRLIDQLVDTLERGDGR CEEEEEEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHCCCCE LRVVLTVRADYYGRFAAHPTLARLVADNSVLVGPMVVDELRRAIEEPALVAGLELEEGLT EEEEEEEECCCCCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHCCCCEEECCCHHCCCH AAVLADARQEPGVLPLLSTALLATWEGRDGRTLRVATYREAGGVAGTLTRLADGMYESLD HHHHHHHCCCCCCHHHHHHHHHEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH AAGQAIVRQLFLRLATLGEDGDDLRRRAPRSELVGSAPVEAVLTVLIARRLVIAADDTVE HHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHEEEECCCHHH VAHEALLREWPRLRGWLETDRDGRRVHRELSGAAVAWDAGGRNPADLYGGPRLAAAQDWA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCCCCCHH AAHPRDANPLEEEFLAAAGAARDRAAQVARRTTQWLRTLAAGLAVLLVVALIATGVAVGQ CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHRATLQADRAHSEAELARASRLAAVTRTLGPDQIDLALLLGVESYRQQPTVETEGNLET HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHEECHHHHHCCCCCCCCCCEEE ALVHTPPGLTQLIRFRSPSFYPSVSPDGRLLASPGQDGTVDLWDLQAGRLLRTFTWPTAR EEEECCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCHH QVAMFSSDGKLLTAGGNDGTVVVWDAVTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSD EEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCEEEECEEEEECCCCCCCCEEEEECC TGEVAIWDRAIPDRPVQLGPPLRFTPRAGALPVAVVSADGRRLAAGTSSPDSSTRVWDLG CCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEECC SRTVIRDLPGLTGSFSPDGRSLATASDGRVEVWDVASGDRRGVPLTGLTGALPGILFSPD CCHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHCCCCEEECCC GQLVAAGDGGNVVRVFDLASGLQIGASLALHTGGPALPTAFLPDGRVVTSGPHEAAVWQV CCEEEECCCCCEEEEEECCCCHHHCCEEEEECCCCCCCEEECCCCCEEECCCCCCEEEEC GRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDGRVQA CCCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PVTFSPDGRLLATAGADDNQLALWDARTGERLAGLDGTRGGRRSYADWSPAGDRIVTGAD CEEECCCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCC GSVRIWDVSDPRHPASVEQLDPDGEPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVFDA CCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEC ASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGGRVSFHDTGTGHVERTLQIPSGG CCCCCCCCCCCCHHHHCCCEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCC GIEFLRGGSVVMTTGDSAGSSAAQLWDAATFAPIGEPLPQPEPGAYFISRDAEGTRAVAG CEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEECC SQNSFAVIWDVDTARWQTVACGIAGRNLTRAEWDQYFPNRPYRQTCPQWPAGS CCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]