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The map label for this gene is yxjL [H]

Identifier: 158318331

GI number: 158318331

Start: 8026082

End: 8026831

Strand: Reverse

Name: yxjL [H]

Synonym: Franean1_6596

Alternate gene names: 158318331

Gene position: 8026831-8026082 (Counterclockwise)

Preceding gene: 158318332

Following gene: 158318329

Centisome position: 89.37

GC content: 70.8

Gene sequence:

>750_bases
GTGTCCCGCGGTGACGATGACGACGGAGTCCCCGGGGTTGACGAGTCCAACGGGGCGCGTCGCGGCGGCCGCGTGGTCGT
CGTAGACGACCATCCGCTGTGGCGCGAGGCGCTGAGCCGGGACATCGCCGAAGCGGGCTTCGTGGTCGTCGGTACCGCGG
GCTCCGTCGCGCAGGCGCTGCGCGTGCTCGCGGCGACCCGGCCTGAGATCGTCGTCCTGGATCTGGGACTGCCCGATGGC
TCGGGCGTCGAGGTGATACGCGCCCTGGTCGGCTCGGCTGAGTCTCCATATCCACTCACCGGTGCTCCGGCTTCGGTGCT
CGTTGTGTCCGCTTCCGGGGAGCAGGCCGATGTGCTGGAAGCGGTCAAGGCCGGAGCTTCCGGGTACCTGCTCAAGTCGG
CCCGTCCTGAGGAGCTTGTCGACGCGGTCCGTCGCACGGCACGGGGGGTTGCGGTCTTCACCGCCGGGCTGGCGGCGCTC
GTCCTCGGCGAGAACTCCCGGGCGGCGCGGAACTCCGGCTCACGTTCGGGTCCCGGCTCGTCTACGGCTCCACGGCTGAC
CGCACGGGAGGTCGAGGTGCTCAGACTGGTGGCGAAGGGCCTGTCCGCCCGGGATGCCGCCCGCCAGCTGGGTGTGTCGC
ACCGGACGGTCCAGAACCACGTTCACAACGTGCTCGGGAAGCTCCAACTCCGCAACCGCGTCGAGCTGACCCGCTTCGCC
GTCCGGGAGGGCTACGACGACGCCTCCTGA

Upstream 100 bases:

>100_bases
CGGCTCGGTCTCGCGGTCTCCGTTTGCGGACGGATCCGGGATCTCGGTGGCGACGTCGTCGTCACCGGCCGTCCCGGCCA
GGGGACGGAGGTCGAGCTTC

Downstream 100 bases:

>100_bases
GCCAGGATGCTGCCTGCGCCCGGAGACCGGGGAAACCCGGCAGGATTTCTATCTACGGTGACAAGAGGGCTGAAATTTGA
TCAGTCCCTGAACTTCTGTC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSRGDDDDGVPGVDESNGARRGGRVVVVDDHPLWREALSRDIAEAGFVVVGTAGSVAQALRVLAATRPEIVVLDLGLPDG
SGVEVIRALVGSAESPYPLTGAPASVLVVSASGEQADVLEAVKAGASGYLLKSARPEELVDAVRRTARGVAVFTAGLAAL
VLGENSRAARNSGSRSGPGSSTAPRLTAREVEVLRLVAKGLSARDAARQLGVSHRTVQNHVHNVLGKLQLRNRVELTRFA
VREGYDDAS

Sequences:

>Translated_249_residues
MSRGDDDDGVPGVDESNGARRGGRVVVVDDHPLWREALSRDIAEAGFVVVGTAGSVAQALRVLAATRPEIVVLDLGLPDG
SGVEVIRALVGSAESPYPLTGAPASVLVVSASGEQADVLEAVKAGASGYLLKSARPEELVDAVRRTARGVAVFTAGLAAL
VLGENSRAARNSGSRSGPGSSTAPRLTAREVEVLRLVAKGLSARDAARQLGVSHRTVQNHVHNVLGKLQLRNRVELTRFA
VREGYDDAS
>Mature_248_residues
SRGDDDDGVPGVDESNGARRGGRVVVVDDHPLWREALSRDIAEAGFVVVGTAGSVAQALRVLAATRPEIVVLDLGLPDGS
GVEVIRALVGSAESPYPLTGAPASVLVVSASGEQADVLEAVKAGASGYLLKSARPEELVDAVRRTARGVAVFTAGLAALV
LGENSRAARNSGSRSGPGSSTAPRLTAREVEVLRLVAKGLSARDAARQLGVSHRTVQNHVHNVLGKLQLRNRVELTRFAV
REGYDDAS

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=221, Percent_Identity=32.579185520362, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788222, Length=227, Percent_Identity=26.8722466960352, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787473, Length=212, Percent_Identity=33.9622641509434, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790102, Length=215, Percent_Identity=29.7674418604651, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786747, Length=221, Percent_Identity=26.6968325791855, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788712, Length=217, Percent_Identity=21.6589861751152, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25866; Mature: 25735

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGDDDDGVPGVDESNGARRGGRVVVVDDHPLWREALSRDIAEAGFVVVGTAGSVAQAL
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHH
RVLAATRPEIVVLDLGLPDGSGVEVIRALVGSAESPYPLTGAPASVLVVSASGEQADVLE
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHH
AVKAGASGYLLKSARPEELVDAVRRTARGVAVFTAGLAALVLGENSRAARNSGSRSGPGS
HHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
STAPRLTAREVEVLRLVAKGLSARDAARQLGVSHRTVQNHVHNVLGKLQLRNRVELTRFA
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREGYDDAS
HHCCCCCCC
>Mature Secondary Structure 
SRGDDDDGVPGVDESNGARRGGRVVVVDDHPLWREALSRDIAEAGFVVVGTAGSVAQAL
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHH
RVLAATRPEIVVLDLGLPDGSGVEVIRALVGSAESPYPLTGAPASVLVVSASGEQADVLE
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHH
AVKAGASGYLLKSARPEELVDAVRRTARGVAVFTAGLAALVLGENSRAARNSGSRSGPGS
HHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
STAPRLTAREVEVLRLVAKGLSARDAARQLGVSHRTVQNHVHNVLGKLQLRNRVELTRFA
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREGYDDAS
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]