| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318329
Identifier: 158318329
GI number: 158318329
Start: 8024810
End: 8025199
Strand: Reverse
Name: 158318329
Synonym: Franean1_6594
Alternate gene names: NA
Gene position: 8025199-8024810 (Counterclockwise)
Preceding gene: 158318331
Following gene: 158318327
Centisome position: 89.35
GC content: 66.67
Gene sequence:
>390_bases ATGCTGACCATCTCGCCCAGCCACCGCGATCTGCTGGCGAAGCCCCACACGGTCACCTTCGCCACGGTCGGTGCCGACGG GCAGCCCCAGGTCACCGCCATCTGGGCGATGCTGGACGGCGACGTCGTACGCACATCGCTGTCCAGGAGCCGCCAGAAGT ACCGGAACCTGCTGGCGCATCCGAAGGTGACGTTGTTCGTCGTGGATCCGCAGAATCCCTTCCGGACCCTGGAGATCCGC GCCGCCGCGGAGATCACGGAAGACCCCGGCCTGGAGTTCCTCAGCCGCCTTCTCGGCTTCTACGGCAGCGACCTGGAGAC CTTCGAGGGGCCCAGGGAGGACCGGGTTGTGATCACGCTCAATCCCACCCGGATCGTCGAGCTCGGGTAG
Upstream 100 bases:
>100_bases AGCGGTCTCCAGGGTCCTCTGGAGCGGCGACTATGGTCGATGCGACGGCGCCTCGGCCCGACCTGGCAGGCGTCTCGCGA GCGAGCGGAGGAGCCCGCGA
Downstream 100 bases:
>100_bases CGCCCGGCCGGACAGGTCCGGTCCCCGCCGCATGCGTCACCTTGACCATCCTCGAGCTGCCGGGTGAGCCCTCGCCGGTG CCGGGCGACGCTACCGCAGA
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MLTISPSHRDLLAKPHTVTFATVGADGQPQVTAIWAMLDGDVVRTSLSRSRQKYRNLLAHPKVTLFVVDPQNPFRTLEIR AAAEITEDPGLEFLSRLLGFYGSDLETFEGPREDRVVITLNPTRIVELG
Sequences:
>Translated_129_residues MLTISPSHRDLLAKPHTVTFATVGADGQPQVTAIWAMLDGDVVRTSLSRSRQKYRNLLAHPKVTLFVVDPQNPFRTLEIR AAAEITEDPGLEFLSRLLGFYGSDLETFEGPREDRVVITLNPTRIVELG >Mature_129_residues MLTISPSHRDLLAKPHTVTFATVGADGQPQVTAIWAMLDGDVVRTSLSRSRQKYRNLLAHPKVTLFVVDPQNPFRTLEIR AAAEITEDPGLEFLSRLLGFYGSDLETFEGPREDRVVITLNPTRIVELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14372; Mature: 14372
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTISPSHRDLLAKPHTVTFATVGADGQPQVTAIWAMLDGDVVRTSLSRSRQKYRNLLAH CEEECCCCCHHCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCC PKVTLFVVDPQNPFRTLEIRAAAEITEDPGLEFLSRLLGFYGSDLETFEGPREDRVVITL CCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE NPTRIVELG CCEEEEEEC >Mature Secondary Structure MLTISPSHRDLLAKPHTVTFATVGADGQPQVTAIWAMLDGDVVRTSLSRSRQKYRNLLAH CEEECCCCCHHCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCC PKVTLFVVDPQNPFRTLEIRAAAEITEDPGLEFLSRLLGFYGSDLETFEGPREDRVVITL CCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE NPTRIVELG CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA