| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is blaI [H]
Identifier: 158318316
GI number: 158318316
Start: 8007401
End: 8007949
Strand: Direct
Name: blaI [H]
Synonym: Franean1_6581
Alternate gene names: 158318316
Gene position: 8007401-8007949 (Clockwise)
Preceding gene: 158318309
Following gene: 158318317
Centisome position: 89.15
GC content: 73.77
Gene sequence:
>549_bases ATGGCACGCCTGGGTGACCTGGAACGGTCTGTCATGGACGTCCTGTGGTCGGCCGACGACTGGCTGACAGCACGCGACGT GGCGGCCCGCCTGCACCACGAGCGCGACCTCGCCTACACCACCGTGCTGACGGTGCTGGAGCGGCTGGAGCGCAAGGGCT TCGTCCGGCGCCAGCGGGCCGCCCGCGCCCACCGCTACGCGGCGACCGACAGCCGCGAGACCGTCGTCGCCGAGGCGATG CTGGAGGCCCTGGGCACCGCCGACGACCGGGGTTCCGCGCTCGTCCGCTTCGTCGGCTCGGTCTCCGCGGAGGAGGCCGA GATCCTGCGCCGCGCGCTGGAGCCGGCCGTGCCCGCCGAAGCGAGCGACCCAGGCGACCCGAGCGCCTCGGCGGACTCTG CGGACTCGGCGAAGACCACCGTCGGGGGGCCGGAGGACGTCACCGACGTCACCGACGGCGCCGTGACGACCACTCCGGCC AGCACATCCGGAGAATCACGGATCGCGACCGAGGCGCGACCGGTACAACTCCCGGCGGACGAGCGGTAG
Upstream 100 bases:
>100_bases TAGAAGATTCTACGTTCGGTAGAAGATTTTTTCGTTGTGAGATCGACCGGGCTCGACAAAGTTCCGGGCAAGAACTTCTA CGCGGCGTAGGATCGGTCCC
Downstream 100 bases:
>100_bases CGTCTGCCGGGACATGACGACCGCGGCCCTTCTCGCCCTGTTCGCGGGCGCGCTGGCCTGGCCGGTTCCGCGCCTGCTGG CCGCCGCGCGGTGGCCGCAC
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MARLGDLERSVMDVLWSADDWLTARDVAARLHHERDLAYTTVLTVLERLERKGFVRRQRAARAHRYAATDSRETVVAEAM LEALGTADDRGSALVRFVGSVSAEEAEILRRALEPAVPAEASDPGDPSASADSADSAKTTVGGPEDVTDVTDGAVTTTPA STSGESRIATEARPVQLPADER
Sequences:
>Translated_182_residues MARLGDLERSVMDVLWSADDWLTARDVAARLHHERDLAYTTVLTVLERLERKGFVRRQRAARAHRYAATDSRETVVAEAM LEALGTADDRGSALVRFVGSVSAEEAEILRRALEPAVPAEASDPGDPSASADSADSAKTTVGGPEDVTDVTDGAVTTTPA STSGESRIATEARPVQLPADER >Mature_181_residues ARLGDLERSVMDVLWSADDWLTARDVAARLHHERDLAYTTVLTVLERLERKGFVRRQRAARAHRYAATDSRETVVAEAML EALGTADDRGSALVRFVGSVSAEEAEILRRALEPAVPAEASDPGDPSASADSADSAKTTVGGPEDVTDVTDGAVTTTPAS TSGESRIATEARPVQLPADER
Specific function: Transcription regulator that binds to an inverted DNA repeat with the consensus sequence 5'-TAC[GT]AC-NNNNN-GT[AC]GTA-3' and regulates genes involved in antibiotic transport, detoxification and cell wall function. Also regulates its own transcription. Bin
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BlaI transcriptional regulatory family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005650 - InterPro: IPR011991 [H]
Pfam domain/function: PF03965 Pencillinase_R [H]
EC number: NA
Molecular weight: Translated: 19472; Mature: 19340
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLGDLERSVMDVLWSADDWLTARDVAARLHHERDLAYTTVLTVLERLERKGFVRRQRA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAHRYAATDSRETVVAEAMLEALGTADDRGSALVRFVGSVSAEEAEILRRALEPAVPAE HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC ASDPGDPSASADSADSAKTTVGGPEDVTDVTDGAVTTTPASTSGESRIATEARPVQLPAD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCHHHCCCCCCCCCCC ER CC >Mature Secondary Structure ARLGDLERSVMDVLWSADDWLTARDVAARLHHERDLAYTTVLTVLERLERKGFVRRQRA CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAHRYAATDSRETVVAEAMLEALGTADDRGSALVRFVGSVSAEEAEILRRALEPAVPAE HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC ASDPGDPSASADSADSAKTTVGGPEDVTDVTDGAVTTTPASTSGESRIATEARPVQLPAD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCHHHCCCCCCCCCCC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]