Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318317

Identifier: 158318317

GI number: 158318317

Start: 8007963

End: 8009258

Strand: Direct

Name: 158318317

Synonym: Franean1_6582

Alternate gene names: NA

Gene position: 8007963-8009258 (Clockwise)

Preceding gene: 158318316

Following gene: 158318318

Centisome position: 89.16

GC content: 77.55

Gene sequence:

>1296_bases
ATGACGACCGCGGCCCTTCTCGCCCTGTTCGCGGGCGCGCTGGCCTGGCCGGTTCCGCGCCTGCTGGCCGCCGCGCGGTG
GCCGCACCGCTGCCCGCGCGCGGCGATCGTGCTGTGGCAGGCGATAGGCCTCGCGGGTGGGGTCTCAGCCCTGCTGGCCG
CCGCGGCCTTCACTGTGGCTCCGTTGTCGCAGGGCATCCCGTCGGCGCTCGCCGACCACGCCTCCAACCTTCTCGCCGGT
GAGCCCCTGGTCGGGCTCGGCCGGACGAACCTCGTCGGGCTGGCCATCGCGGCGGCGCTGGCGGCACGCCTGTTCGGCGT
GCTGGCCATGTCGACCGCGGCGACCCTGCGCGAGCGCCACCGGCACCGGCACCTCGTCGACCTCGCCGGCCACCGCCACC
GGCACCGCGGGCACGACCACGGTGACCCCGAGCACCCCGACAGCCTGGGCGGCTCGGGCGGCTCGGGCGGCTCGGGCGGC
TCGGGCGGCTCGGGCGGCTCCGGAGGCTCGGGCGACGTCGCCGGGCACGAGGAGCACGGCACCGGCTGCCGCCTGTGCGA
GCACCGGGACAGGGCCGGGACCCGGCTGCGGATCCTGGACCATCCCGTCGCCGTCGCCTACTGCGTCCCCGGGGTGCGCC
ATGCGCGGGTCGTCGTCTCCGCCGGCCTGCTGCGGACGCTGACCCCCGAGGAGCTGGACGCCGTCCTCGCCCACGAGGAG
GCGCACGTCAGCGGCCGGCACGACCTGGTCATCCAGCCGTTCGTCGCCTGGGAGCGCACCTTCCCCTTCCTGCGCCCGGC
CCGCGAGGCGACGGCCGCCGTCTCGCTGCTGGTCGAGATGCTCGCGGACGACGCCGCCGCCCGGCGCACCTGCGGCCGGA
CCCTCGCCCGGGCGCTCGCCCGGCTCGGCGTCACCCGCGCAGCGGTGCCCGCCGGAACACTGAGCGTGACGGGCCCGGAC
CTCCCCAGCCAGCGACCACCCACGACGGGCGCCTCACCCTCCGCGCCGGCGAACGGGTCGGTCCCACCCTTCGAGCCGGC
GAGACTCGGGCCGGCAAGCACGCCGGAGTCACCCGCCGTACTCGGAGTCGCCGGCGCGGGTCGGCTGGCGGCCGTCGCCG
CCGCGGTCGCCACGGACCGCTCCGACCCGGCGCGTAACGGGGGCGTGCGGACGCCGGTCGTCGCCCGGATTGCCCGGCTG
CTCGACCCGCCGGCCGTCCCGATCTGGCTGCCCGGGACCGCCTACCTCACCGCCGCGATGGTGTTCCTCACCCCGGTGGT
CCTGCTCCTCACCTGA

Upstream 100 bases:

>100_bases
GTGACGACCACTCCGGCCAGCACATCCGGAGAATCACGGATCGCGACCGAGGCGCGACCGGTACAACTCCCGGCGGACGA
GCGGTAGCGTCTGCCGGGAC

Downstream 100 bases:

>100_bases
GCTTTCCGTTCACCTGAGCTTTCCGGCGACCCTGGTGCCACAGAAGCGCGCACAGTCGGCAGACTGGACATGTGCGCCGG
CAGGGCAGCAGCCCGCTCGC

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: Integral Membrane Protein; Zn-Dependent Protease With Chaperone Function; M48 Family Peptidase; Peptidase M; Membrane-Bound Protease; Metallopeptidase; Heat Shock Protein

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVAPLSQGIPSALADHASNLLAG
EPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERHRHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGG
SGGSGGSGGSGDVAGHEEHGTGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE
AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALARLGVTRAAVPAGTLSVTGPD
LPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAVLGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARL
LDPPAVPIWLPGTAYLTAAMVFLTPVVLLLT

Sequences:

>Translated_431_residues
MTTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVAPLSQGIPSALADHASNLLAG
EPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERHRHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGG
SGGSGGSGGSGDVAGHEEHGTGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE
AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALARLGVTRAAVPAGTLSVTGPD
LPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAVLGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARL
LDPPAVPIWLPGTAYLTAAMVFLTPVVLLLT
>Mature_430_residues
TTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVAPLSQGIPSALADHASNLLAGE
PLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERHRHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGGS
GGSGGSGGSGDVAGHEEHGTGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEEA
HVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALARLGVTRAAVPAGTLSVTGPDL
PSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAVLGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARLL
DPPAVPIWLPGTAYLTAAMVFLTPVVLLLT

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44022; Mature: 43891

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLSQGIPSALADHASNLLAGEPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERH
HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGGSGGSGGSGGSGDVAGHEEHG
HHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE
CCHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALA
HHCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGVTRAAVPAGTLSVTGPDLPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAV
HHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARLLDPPAVPIWLPGTAYLTAAM
EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHH
VFLTPVVLLLT
HHHHHHHHHCC
>Mature Secondary Structure 
TTAALLALFAGALAWPVPRLLAAARWPHRCPRAAIVLWQAIGLAGGVSALLAAAAFTVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLSQGIPSALADHASNLLAGEPLVGLGRTNLVGLAIAAALAARLFGVLAMSTAATLRERH
HHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHRHLVDLAGHRHRHRGHDHGDPEHPDSLGGSGGSGGSGGSGGSGGSGGSGDVAGHEEHG
HHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGCRLCEHRDRAGTRLRILDHPVAVAYCVPGVRHARVVVSAGLLRTLTPEELDAVLAHEE
CCHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AHVSGRHDLVIQPFVAWERTFPFLRPAREATAAVSLLVEMLADDAAARRTCGRTLARALA
HHCCCCCCEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGVTRAAVPAGTLSVTGPDLPSQRPPTTGASPSAPANGSVPPFEPARLGPASTPESPAV
HHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LGVAGAGRLAAVAAAVATDRSDPARNGGVRTPVVARIARLLDPPAVPIWLPGTAYLTAAM
EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHH
VFLTPVVLLLT
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA