| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318297
Identifier: 158318297
GI number: 158318297
Start: 7981604
End: 7982836
Strand: Direct
Name: 158318297
Synonym: Franean1_6562
Alternate gene names: NA
Gene position: 7981604-7982836 (Clockwise)
Preceding gene: 158318296
Following gene: 158318298
Centisome position: 88.86
GC content: 64.8
Gene sequence:
>1233_bases ATGCGCGACCTGATCGTATGTCGGTCCTGCGGCGCGGCTGAGCTGAAGGACTTCCTGTCGCTGGGAACGACACCACTCGC CGACGCGCTGGTCCCGGCGGACGCTCTCGACCGGCCCGAGCCACGCTTTCCGCTGGAGGTCGCATTCTGTTCGGCCTGCT CCCTGGTGCAGATCCTCGAGGAGGTGCCGCCGCAACAGCTCTTCGTCGACAACTACCTGTATTTCTCCTCCTTCTCCGAC CATCTGCTTCAGCACGCCCGGGAGCATGCGCTCAACCTGATCGAGAGTCGTGGGCTCGGTCCGGACAGCCTGGTGGTCGA GCTTGCCAGCAACGACGGTTACCTGCTCCGTAACTTCGTCGAGCGCGGGATACCGGTACTCGGCGTCGATCCGGCGCCAG ACCAGGCAGCGGTCGCCGAACGCATCGGAGTCCCGACCCTGCCAGAGTTCTTCGGCACCCGACTCGCCCGGCGCATCCTC GATGAGCACGGTCCCGCCGACGTGGTCATCGCGAACAATGTCATGGCCCATGTACCAGCCCTGAACGACTTCGTCGCGGG GATGCGGATGCTGGTGGCCGAAGGCGGGCTGATCACGGTGGAGAACCCCTACGTGCGGGATCTCGTCGAGCAGCGCCAGT TCGACACCATCTATCACGAGCATTTCTGCTACTACTCGTGTACGGCCGTGGACAACCTGGTCCGTCGGCACGGCCTCTTC CTCAACGACGTGGAGTACTTCCCGAACCTGCACGGCGGCACCCTGCGTTGGCACCTCGAACCGCGCGAGGAGGTCCGCGA CACGGTGCGGCGCTCCCTCGCCGAGGAGGCCAGCAGGGGCATGACGTCCTTCGATTACTACGCCGACTTCGGCGTGGCGG TCGAGCAGATCAGGACCGAGCTGCGGTCGCTGCTGACCTCACTGCGCGCGGAGGGTGGCCGTATCGCTGCCTACGGCGCG GCTGCCAAGGGCGCCACCCTGATCAACTATGTCGGCATCGGCACAGACCTGGTCGATTTCGTCGTCGACCGGAACGTGCA CAAACACGGACGTCACATGCCTGGCACCCATCTACCGATCAGGCCCACCGACGTGCTCCTGACCGAACAGCCGGACTACG TCCTGCTGCTGGCCTGGAATTTCGCCGAAGAGATCATGCAGCAACAGGCGGAGTACATCCGGCGTGGCGGCCGGTTCATC ATTCCCGTCCCCAGACCGGAGGTCGTCCCATGA
Upstream 100 bases:
>100_bases TGATCGGGGCGCGCTTCCAGCGGATCCGGCGCATCCAGGAGCTCATGGCGGAAGGTCTACTCGACAACTCCCTGCGGCCG ATCAGAAGGGAGCGGGTGCC
Downstream 100 bases:
>100_bases CAGCTCCCCGCATCGTCTGCCCTGCCTGTGGCGGGGAAACCATCATTCCCTTCTACGCCAAGGACCGGGTGCCGTCGCAC AGTTGTCTGCTGATGGCGGA
Product: C-methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase Protein; NDP-Hexose 3-C-Methyltransferase TylCIII; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MRDLIVCRSCGAAELKDFLSLGTTPLADALVPADALDRPEPRFPLEVAFCSACSLVQILEEVPPQQLFVDNYLYFSSFSD HLLQHAREHALNLIESRGLGPDSLVVELASNDGYLLRNFVERGIPVLGVDPAPDQAAVAERIGVPTLPEFFGTRLARRIL DEHGPADVVIANNVMAHVPALNDFVAGMRMLVAEGGLITVENPYVRDLVEQRQFDTIYHEHFCYYSCTAVDNLVRRHGLF LNDVEYFPNLHGGTLRWHLEPREEVRDTVRRSLAEEASRGMTSFDYYADFGVAVEQIRTELRSLLTSLRAEGGRIAAYGA AAKGATLINYVGIGTDLVDFVVDRNVHKHGRHMPGTHLPIRPTDVLLTEQPDYVLLLAWNFAEEIMQQQAEYIRRGGRFI IPVPRPEVVP
Sequences:
>Translated_410_residues MRDLIVCRSCGAAELKDFLSLGTTPLADALVPADALDRPEPRFPLEVAFCSACSLVQILEEVPPQQLFVDNYLYFSSFSD HLLQHAREHALNLIESRGLGPDSLVVELASNDGYLLRNFVERGIPVLGVDPAPDQAAVAERIGVPTLPEFFGTRLARRIL DEHGPADVVIANNVMAHVPALNDFVAGMRMLVAEGGLITVENPYVRDLVEQRQFDTIYHEHFCYYSCTAVDNLVRRHGLF LNDVEYFPNLHGGTLRWHLEPREEVRDTVRRSLAEEASRGMTSFDYYADFGVAVEQIRTELRSLLTSLRAEGGRIAAYGA AAKGATLINYVGIGTDLVDFVVDRNVHKHGRHMPGTHLPIRPTDVLLTEQPDYVLLLAWNFAEEIMQQQAEYIRRGGRFI IPVPRPEVVP >Mature_410_residues MRDLIVCRSCGAAELKDFLSLGTTPLADALVPADALDRPEPRFPLEVAFCSACSLVQILEEVPPQQLFVDNYLYFSSFSD HLLQHAREHALNLIESRGLGPDSLVVELASNDGYLLRNFVERGIPVLGVDPAPDQAAVAERIGVPTLPEFFGTRLARRIL DEHGPADVVIANNVMAHVPALNDFVAGMRMLVAEGGLITVENPYVRDLVEQRQFDTIYHEHFCYYSCTAVDNLVRRHGLF LNDVEYFPNLHGGTLRWHLEPREEVRDTVRRSLAEEASRGMTSFDYYADFGVAVEQIRTELRSLLTSLRAEGGRIAAYGA AAKGATLINYVGIGTDLVDFVVDRNVHKHGRHMPGTHLPIRPTDVLLTEQPDYVLLLAWNFAEEIMQQQAEYIRRGGRFI IPVPRPEVVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45824; Mature: 45824
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLIVCRSCGAAELKDFLSLGTTPLADALVPADALDRPEPRFPLEVAFCSACSLVQILE CCCEEEECCCCHHHHHHHHHCCCCHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH EVPPQQLFVDNYLYFSSFSDHLLQHAREHALNLIESRGLGPDSLVVELASNDGYLLRNFV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH ERGIPVLGVDPAPDQAAVAERIGVPTLPEFFGTRLARRILDEHGPADVVIANNVMAHVPA HCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCH LNDFVAGMRMLVAEGGLITVENPYVRDLVEQRQFDTIYHEHFCYYSCTAVDNLVRRHGLF HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCE LNDVEYFPNLHGGTLRWHLEPREEVRDTVRRSLAEEASRGMTSFDYYADFGVAVEQIRTE EECHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRSLLTSLRAEGGRIAAYGAAAKGATLINYVGIGTDLVDFVVDRNVHKHGRHMPGTHLPI HHHHHHHHHCCCCEEEEECCCCCCCCEEHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCCC RPTDVLLTEQPDYVLLLAWNFAEEIMQQQAEYIRRGGRFIIPVPRPEVVP CCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure MRDLIVCRSCGAAELKDFLSLGTTPLADALVPADALDRPEPRFPLEVAFCSACSLVQILE CCCEEEECCCCHHHHHHHHHCCCCHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH EVPPQQLFVDNYLYFSSFSDHLLQHAREHALNLIESRGLGPDSLVVELASNDGYLLRNFV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH ERGIPVLGVDPAPDQAAVAERIGVPTLPEFFGTRLARRILDEHGPADVVIANNVMAHVPA HCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCH LNDFVAGMRMLVAEGGLITVENPYVRDLVEQRQFDTIYHEHFCYYSCTAVDNLVRRHGLF HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCE LNDVEYFPNLHGGTLRWHLEPREEVRDTVRRSLAEEASRGMTSFDYYADFGVAVEQIRTE EECHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRSLLTSLRAEGGRIAAYGAAAKGATLINYVGIGTDLVDFVVDRNVHKHGRHMPGTHLPI HHHHHHHHHCCCCEEEEECCCCCCCCEEHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCCC RPTDVLLTEQPDYVLLLAWNFAEEIMQQQAEYIRRGGRFIIPVPRPEVVP CCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA