| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318298
Identifier: 158318298
GI number: 158318298
Start: 7982833
End: 7984023
Strand: Direct
Name: 158318298
Synonym: Franean1_6563
Alternate gene names: NA
Gene position: 7982833-7984023 (Clockwise)
Preceding gene: 158318297
Following gene: 158318299
Centisome position: 88.88
GC content: 66.5
Gene sequence:
>1191_bases ATGACAGCTCCCCGCATCGTCTGCCCTGCCTGTGGCGGGGAAACCATCATTCCCTTCTACGCCAAGGACCGGGTGCCGTC GCACAGTTGTCTGCTGATGGCGGACGAGGAAGAGGCACGCGCGTTCCCGACCGGCAGCCTCCGGATCGCCTTCTGCGAGG GCTGCGGCTTCATCATGAACACCTCCTTCGATCCGGCCAAGAGCCGATATTCCGCCCGATATGAGGAGACTCAGGCGTTC TCGGCTCGCTTCACCGAGTTCGCGCGCGACCTGGCCAAGCGCTGGGTACACACGTATGACCTGTACGGGAAGGCGATCCT GGAGATCGGTTGCGGCAAGGGTGAGTTCCTCGTCCACATGCTCGAGGAAGGGGCCGGTTCCGGAATCGGAATCGACCCGG GCGTCCGTCCCGAGCGGATCGACACCCCGGTCGCGGATCGGCTGACGTGGATCAACGACCTTTACTCGGAGCGGTACGCG CACCTGGCGGCCGACGCGGTGGTGTGCCGCCACACGCTGGAGCACATCGGCCCGGTCGGAGACTTCATGCGCACCATCCG CGCGGCGATCGGCGATCGGCCGGACATACCGGTCCTGTTCGAGCTCCCAGACGTCCTGCGGGTGCTTACGGAGGCGGCGT TCTGGGACGTGTACTACGAGCACTGCTCCTACTTCAGCGCAGGCTCCCTGGCGAGGCTGTTCCGGGCCACCGGATTCGAG GTGCTTGACGTCCGCCTCGACTACGACGACCAGTACCTGCTGATCGAGGCGCGGCCGTCCAGCGTTCCGGCACCGGGCGA CCCACTGCCGATCGAGGACGACATGGCGGAGCTGCACGCAGGCGTGCGTCATTTCCAGCGCCACCTCGACGCCACCCTCC AGGGGTGGAGCGAGCAGGTGCGGCGGGTGCATCAGCGCGGGGGGACGACCGCGATCTGGGGCTCCGGGTCGAAAGGTGTG TCGTTCCTGGCAAGCCTCGGCACCGCCGCCGAACTGGTCCGGTACGCAGTCGACATCAACCCGCACAAGCACGGCATGTT CATGGCCGGTAGCGGCCACCGCATCGTCCCCCCCGAGCGGCTCCGGCAGGACACTCCGGAACTGGTGATCGCAATGAACC CGATCTACTGCGGCGAGATCGCTGCGGAACTCGCCCGGCTGGGTGTCGACACCGAGCTGAAGGCCGTCTGA
Upstream 100 bases:
>100_bases TGGCCTGGAATTTCGCCGAAGAGATCATGCAGCAACAGGCGGAGTACATCCGGCGTGGCGGCCGGTTCATCATTCCCGTC CCCAGACCGGAGGTCGTCCC
Downstream 100 bases:
>100_bases GTGGGAACTGATCGCGCTCCACGGGGTACATCGGGGTGAGGCGTGCGGCGCCACGTGGCCCGGCCTGCACGAAGAGCTCG ACGGGCTGACGATCAGCCAG
Product: C-methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Type; SAM-Dependent Methyltransferase; NDP-Hexose 3-C-Methyltransferase Protein; NDP-Hexose Methyltransferase; D-Mycarose 3-C-Methyltransferase; C-Methyltransferase Family; NDP-Hexose Methyltransferase Protein; NAD-Dependent Epimerase/Dehydratase; Sugar Transferase; Methyltransferase Family Protein; Ndp-Hexose Methyltransferase Protein; Sugar Nucleotide Processing
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTAPRIVCPACGGETIIPFYAKDRVPSHSCLLMADEEEARAFPTGSLRIAFCEGCGFIMNTSFDPAKSRYSARYEETQAF SARFTEFARDLAKRWVHTYDLYGKAILEIGCGKGEFLVHMLEEGAGSGIGIDPGVRPERIDTPVADRLTWINDLYSERYA HLAADAVVCRHTLEHIGPVGDFMRTIRAAIGDRPDIPVLFELPDVLRVLTEAAFWDVYYEHCSYFSAGSLARLFRATGFE VLDVRLDYDDQYLLIEARPSSVPAPGDPLPIEDDMAELHAGVRHFQRHLDATLQGWSEQVRRVHQRGGTTAIWGSGSKGV SFLASLGTAAELVRYAVDINPHKHGMFMAGSGHRIVPPERLRQDTPELVIAMNPIYCGEIAAELARLGVDTELKAV
Sequences:
>Translated_396_residues MTAPRIVCPACGGETIIPFYAKDRVPSHSCLLMADEEEARAFPTGSLRIAFCEGCGFIMNTSFDPAKSRYSARYEETQAF SARFTEFARDLAKRWVHTYDLYGKAILEIGCGKGEFLVHMLEEGAGSGIGIDPGVRPERIDTPVADRLTWINDLYSERYA HLAADAVVCRHTLEHIGPVGDFMRTIRAAIGDRPDIPVLFELPDVLRVLTEAAFWDVYYEHCSYFSAGSLARLFRATGFE VLDVRLDYDDQYLLIEARPSSVPAPGDPLPIEDDMAELHAGVRHFQRHLDATLQGWSEQVRRVHQRGGTTAIWGSGSKGV SFLASLGTAAELVRYAVDINPHKHGMFMAGSGHRIVPPERLRQDTPELVIAMNPIYCGEIAAELARLGVDTELKAV >Mature_395_residues TAPRIVCPACGGETIIPFYAKDRVPSHSCLLMADEEEARAFPTGSLRIAFCEGCGFIMNTSFDPAKSRYSARYEETQAFS ARFTEFARDLAKRWVHTYDLYGKAILEIGCGKGEFLVHMLEEGAGSGIGIDPGVRPERIDTPVADRLTWINDLYSERYAH LAADAVVCRHTLEHIGPVGDFMRTIRAAIGDRPDIPVLFELPDVLRVLTEAAFWDVYYEHCSYFSAGSLARLFRATGFEV LDVRLDYDDQYLLIEARPSSVPAPGDPLPIEDDMAELHAGVRHFQRHLDATLQGWSEQVRRVHQRGGTTAIWGSGSKGVS FLASLGTAAELVRYAVDINPHKHGMFMAGSGHRIVPPERLRQDTPELVIAMNPIYCGEIAAELARLGVDTELKAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43888; Mature: 43757
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPRIVCPACGGETIIPFYAKDRVPSHSCLLMADEEEARAFPTGSLRIAFCEGCGFIMN CCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEECCHHHHCCCCCCEEEEEECCCCEEEC TSFDPAKSRYSARYEETQAFSARFTEFARDLAKRWVHTYDLYGKAILEIGCGKGEFLVHM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH LEEGAGSGIGIDPGVRPERIDTPVADRLTWINDLYSERYAHLAADAVVCRHTLEHIGPVG HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DFMRTIRAAIGDRPDIPVLFELPDVLRVLTEAAFWDVYYEHCSYFSAGSLARLFRATGFE HHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE VLDVRLDYDDQYLLIEARPSSVPAPGDPLPIEDDMAELHAGVRHFQRHLDATLQGWSEQV EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVHQRGGTTAIWGSGSKGVSFLASLGTAAELVRYAVDINPHKHGMFMAGSGHRIVPPER HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHH LRQDTPELVIAMNPIYCGEIAAELARLGVDTELKAV HHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAPRIVCPACGGETIIPFYAKDRVPSHSCLLMADEEEARAFPTGSLRIAFCEGCGFIMN CCCCEEEECCCCCEEEEEEECCCCCCCCEEEEECCHHHHCCCCCCEEEEEECCCCEEEC TSFDPAKSRYSARYEETQAFSARFTEFARDLAKRWVHTYDLYGKAILEIGCGKGEFLVHM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH LEEGAGSGIGIDPGVRPERIDTPVADRLTWINDLYSERYAHLAADAVVCRHTLEHIGPVG HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DFMRTIRAAIGDRPDIPVLFELPDVLRVLTEAAFWDVYYEHCSYFSAGSLARLFRATGFE HHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE VLDVRLDYDDQYLLIEARPSSVPAPGDPLPIEDDMAELHAGVRHFQRHLDATLQGWSEQV EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRVHQRGGTTAIWGSGSKGVSFLASLGTAAELVRYAVDINPHKHGMFMAGSGHRIVPPER HHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHH LRQDTPELVIAMNPIYCGEIAAELARLGVDTELKAV HHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA