| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318286
Identifier: 158318286
GI number: 158318286
Start: 7967596
End: 7968507
Strand: Reverse
Name: 158318286
Synonym: Franean1_6551
Alternate gene names: NA
Gene position: 7968507-7967596 (Counterclockwise)
Preceding gene: 158318287
Following gene: 158318285
Centisome position: 88.72
GC content: 63.05
Gene sequence:
>912_bases ATGGCTCGACTTGGACCGACCATCCGGCGCCGGTACGTCCTCATCGCGCTCGTGGCGGCGGTGGTCGCGGCCGGTGGAAT CCTGATCGTCGTCACCGTTGCGAGCGATGGTTCGGACCCGACAGCAGGCGGGCCCTCGCCAGCCGGTACCGGGACCGCCG TTGCGCCGCCGGTCGGTCCGTCCACGGCCCACGGGTGCGGGAGCAGGCCGGACGACTCGAACACCGGCCCACCCGCGGGC ACCCACCTCGGGCGAACGGCGGACGTAACCCTCCGGACCGCTGGCCAGCTACTCGTCAACAAGGAGTTCTTCGGCCTGGT CGACATCTACGCCGACAATGTCACCATCAGGAACTCGGTCGTCCACGGCAGTATCCGGATACGCGGGAATAACGCCGTGA TAGACCATGTGGCGGCCGCCGGGATCGCAATCCGTGGCGGCTCCGGTCATGTCGTTCAGTACACTGATGTCTCCGGCGGA GATGACGGATTTCATATCGATTCCAAATATCAGCCGGTTTCACGGGTACTCATACGCAACAACTACGTACACGATCCTTC CCCACCGCCCGATGCTCATGTCGACGGCGTCCAGGTTCGCGGCGTACGGAACCTGAGCCTGCTGTGTAACAACTTCGACC TGACGCCGTACCAGCGGACCCAGAATGGCGTCATATATCTTGAGTGGGCGAGCGGTGGAAACTATGACGTGATCGTCGAC CGTAACTGGCTGAACGGCGGCGGCAGTACGCTGTTTGTCGCCGCGACGAATCTCCGGGTGACGCGGAACCGCTTCGGCCG TGATTTCCGCTGGAGCGTCTGCCGGCTCGGCGACAACGAGAGATCATTTTTCAGTGCTGGAAACGTCTGGGATGACACCG GCACACCGGTAAAGCTGTGCGACCAGGAATAG
Upstream 100 bases:
>100_bases GGCATGTCAGCCTGCTCCACTTTGCCCTCGGCGGGTCCTCGTCTCCCGTACCGGCCGGCCCCCTGCCGCTACACGCCTGA TCGAGAGCTGGAAGGATCCG
Downstream 100 bases:
>100_bases GTCATGTCCGGCGGTGGGCCTCTGCTGACGCCAGTTTTTTGACCAGGCACTGCTGGGGGGATCCGATGGCTCGACCCGGA CGGACTATTCGACGGCGGCA
Product: parallel beta-helix repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MARLGPTIRRRYVLIALVAAVVAAGGILIVVTVASDGSDPTAGGPSPAGTGTAVAPPVGPSTAHGCGSRPDDSNTGPPAG THLGRTADVTLRTAGQLLVNKEFFGLVDIYADNVTIRNSVVHGSIRIRGNNAVIDHVAAAGIAIRGGSGHVVQYTDVSGG DDGFHIDSKYQPVSRVLIRNNYVHDPSPPPDAHVDGVQVRGVRNLSLLCNNFDLTPYQRTQNGVIYLEWASGGNYDVIVD RNWLNGGGSTLFVAATNLRVTRNRFGRDFRWSVCRLGDNERSFFSAGNVWDDTGTPVKLCDQE
Sequences:
>Translated_303_residues MARLGPTIRRRYVLIALVAAVVAAGGILIVVTVASDGSDPTAGGPSPAGTGTAVAPPVGPSTAHGCGSRPDDSNTGPPAG THLGRTADVTLRTAGQLLVNKEFFGLVDIYADNVTIRNSVVHGSIRIRGNNAVIDHVAAAGIAIRGGSGHVVQYTDVSGG DDGFHIDSKYQPVSRVLIRNNYVHDPSPPPDAHVDGVQVRGVRNLSLLCNNFDLTPYQRTQNGVIYLEWASGGNYDVIVD RNWLNGGGSTLFVAATNLRVTRNRFGRDFRWSVCRLGDNERSFFSAGNVWDDTGTPVKLCDQE >Mature_302_residues ARLGPTIRRRYVLIALVAAVVAAGGILIVVTVASDGSDPTAGGPSPAGTGTAVAPPVGPSTAHGCGSRPDDSNTGPPAGT HLGRTADVTLRTAGQLLVNKEFFGLVDIYADNVTIRNSVVHGSIRIRGNNAVIDHVAAAGIAIRGGSGHVVQYTDVSGGD DGFHIDSKYQPVSRVLIRNNYVHDPSPPPDAHVDGVQVRGVRNLSLLCNNFDLTPYQRTQNGVIYLEWASGGNYDVIVDR NWLNGGGSTLFVAATNLRVTRNRFGRDFRWSVCRLGDNERSFFSAGNVWDDTGTPVKLCDQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32112; Mature: 31981
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLGPTIRRRYVLIALVAAVVAAGGILIVVTVASDGSDPTAGGPSPAGTGTAVAPPVGP CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCC STAHGCGSRPDDSNTGPPAGTHLGRTADVTLRTAGQLLVNKEFFGLVDIYADNVTIRNSV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEECCCHHEEEEEEECCEEEEEEE VHGSIRIRGNNAVIDHVAAAGIAIRGGSGHVVQYTDVSGGDDGFHIDSKYQPVSRVLIRN EEEEEEEECCCEEEEHHHCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHC NYVHDPSPPPDAHVDGVQVRGVRNLSLLCNNFDLTPYQRTQNGVIYLEWASGGNYDVIVD CCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCCCCCEECCCCEEEEEECCCCCEEEEEE RNWLNGGGSTLFVAATNLRVTRNRFGRDFRWSVCRLGDNERSFFSAGNVWDDTGTPVKLC CCCCCCCCCEEEEEEECEEEEHHHCCCCCEEEEEECCCCCCCEEECCCEECCCCCCEEEC DQE CCC >Mature Secondary Structure ARLGPTIRRRYVLIALVAAVVAAGGILIVVTVASDGSDPTAGGPSPAGTGTAVAPPVGP CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCC STAHGCGSRPDDSNTGPPAGTHLGRTADVTLRTAGQLLVNKEFFGLVDIYADNVTIRNSV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEECCCHHEEEEEEECCEEEEEEE VHGSIRIRGNNAVIDHVAAAGIAIRGGSGHVVQYTDVSGGDDGFHIDSKYQPVSRVLIRN EEEEEEEECCCEEEEHHHCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHC NYVHDPSPPPDAHVDGVQVRGVRNLSLLCNNFDLTPYQRTQNGVIYLEWASGGNYDVIVD CCCCCCCCCCCCCCCCEEEECEEEEEEEEECCCCCCCEECCCCEEEEEECCCCCEEEEEE RNWLNGGGSTLFVAATNLRVTRNRFGRDFRWSVCRLGDNERSFFSAGNVWDDTGTPVKLC CCCCCCCCCEEEEEEECEEEEHHHCCCCCEEEEEECCCCCCCEEECCCEECCCCCCEEEC DQE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA