| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318276
Identifier: 158318276
GI number: 158318276
Start: 7955505
End: 7956245
Strand: Direct
Name: 158318276
Synonym: Franean1_6541
Alternate gene names: NA
Gene position: 7955505-7956245 (Clockwise)
Preceding gene: 158318271
Following gene: 158318277
Centisome position: 88.57
GC content: 62.75
Gene sequence:
>741_bases TTGAAGCCTCCGACCCGTCGGGCGGCTTCGAGTGGCCACAAAACCCTAATCCCCCACACAGCACCGCAGAAAGCAAGGTT TACCTACCTACCATCTTTCCTTTCTGCGCTCGTGGGGCACTTAAAGGACGAGCTGAGCGAGACAGCGTCGACTGCAATGA GATCGAATATCGGGACGTCGGCGTCCCCGCAGCTCGACAACATCTTCTCCGATGTTCCCCATGACGTCGTGGGGCAGATT TCCCCGGACCAGACCCTGGAGCTTATCCGGCTGACCGCGAAAGTCCTCCTGAACGGTATCGACGAGGTGATGGACGATGC CTCGACATCGTCTTTGCGCGCAGACCTGGAACGCTACAGCCGAAAGGTCGCCTTCTCTGCTGCCACCGTGTGTGCGAAAT TGGCAGAGAACCGGAGCCGAGCCGCCGCGCAACGGCAGACGTTACTCGTGAAAATTCTGGTGAACGGTGACGAGGAACAG ACCGCGGAGCGGGATTCCGGCCTGTTTCCGCTCGGCCAGCCGGTGCGGGTCATCGGCATCGTCCCGCGGCTCGACGAGGC CGAGCTCCTGGTTCACGAGGTCGCCCGGGCCCTGGATCGGCACCGGGTCACGGTGTGCGCGGCGGTGCACGGTCGGGTCG TGTTGGCAGTGCTGCCAGCTGCCGCTGGGGGCGCCCTAGACCACAGGGTACAGGCTCTCGCCTCCGGTCAAATCCTCGTG TCGCTCGAGATCTGCTGGTAA
Upstream 100 bases:
>100_bases CGCTTGCGCTCGTCTTCCCGTTCTCTGCCTGACGCGCTCACGGCGCGCCTTTTCCCGACGCTCACCACCACAGTCGTCAG CTAAGGCTGCTCGGGGTGGC
Downstream 100 bases:
>100_bases AGCATGCGCCAGACCACTTGATTCCGCTCTCGACATCACCGGCTACGCGCGACGTCACGATGTACAGAGGGTGCAGTTGC GTGTAACTCGGCACGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKPPTRRAASSGHKTLIPHTAPQKARFTYLPSFLSALVGHLKDELSETASTAMRSNIGTSASPQLDNIFSDVPHDVVGQI SPDQTLELIRLTAKVLLNGIDEVMDDASTSSLRADLERYSRKVAFSAATVCAKLAENRSRAAAQRQTLLVKILVNGDEEQ TAERDSGLFPLGQPVRVIGIVPRLDEAELLVHEVARALDRHRVTVCAAVHGRVVLAVLPAAAGGALDHRVQALASGQILV SLEICW
Sequences:
>Translated_246_residues MKPPTRRAASSGHKTLIPHTAPQKARFTYLPSFLSALVGHLKDELSETASTAMRSNIGTSASPQLDNIFSDVPHDVVGQI SPDQTLELIRLTAKVLLNGIDEVMDDASTSSLRADLERYSRKVAFSAATVCAKLAENRSRAAAQRQTLLVKILVNGDEEQ TAERDSGLFPLGQPVRVIGIVPRLDEAELLVHEVARALDRHRVTVCAAVHGRVVLAVLPAAAGGALDHRVQALASGQILV SLEICW >Mature_246_residues MKPPTRRAASSGHKTLIPHTAPQKARFTYLPSFLSALVGHLKDELSETASTAMRSNIGTSASPQLDNIFSDVPHDVVGQI SPDQTLELIRLTAKVLLNGIDEVMDDASTSSLRADLERYSRKVAFSAATVCAKLAENRSRAAAQRQTLLVKILVNGDEEQ TAERDSGLFPLGQPVRVIGIVPRLDEAELLVHEVARALDRHRVTVCAAVHGRVVLAVLPAAAGGALDHRVQALASGQILV SLEICW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26460; Mature: 26460
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPTRRAASSGHKTLIPHTAPQKARFTYLPSFLSALVGHLKDELSETASTAMRSNIGTS CCCCCCHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASPQLDNIFSDVPHDVVGQISPDQTLELIRLTAKVLLNGIDEVMDDASTSSLRADLERYS CCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RKVAFSAATVCAKLAENRSRAAAQRQTLLVKILVNGDEEQTAERDSGLFPLGQPVRVIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEEE VPRLDEAELLVHEVARALDRHRVTVCAAVHGRVVLAVLPAAAGGALDHRVQALASGQILV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCEEE SLEICW EEEECC >Mature Secondary Structure MKPPTRRAASSGHKTLIPHTAPQKARFTYLPSFLSALVGHLKDELSETASTAMRSNIGTS CCCCCCHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASPQLDNIFSDVPHDVVGQISPDQTLELIRLTAKVLLNGIDEVMDDASTSSLRADLERYS CCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RKVAFSAATVCAKLAENRSRAAAQRQTLLVKILVNGDEEQTAERDSGLFPLGQPVRVIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEEE VPRLDEAELLVHEVARALDRHRVTVCAAVHGRVVLAVLPAAAGGALDHRVQALASGQILV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCEEE SLEICW EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA