Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318271

Identifier: 158318271

GI number: 158318271

Start: 7948087

End: 7949145

Strand: Direct

Name: 158318271

Synonym: Franean1_6536

Alternate gene names: NA

Gene position: 7948087-7949145 (Clockwise)

Preceding gene: 158318269

Following gene: 158318276

Centisome position: 88.49

GC content: 73.28

Gene sequence:

>1059_bases
GTGAAGGTCGACAGCACCCTTGGCTCGCTGGACATCGCTGCCGGCCAGGCCCGCGCCGCGCAGGCCGCCGGCTACGACGC
CATCTGGACCGGGGAGGTGAACCAGGACCCGTTCCTCCCGCTGACCCTCGCCGCCGACGCGACGTCCGCGATCGAGCTGG
GCACCTCGATCACTGTCGCGCTGTCCCGCTCGCCGATGTCGCTGGCGTACACCGCGCACGACCTGCACGGGTTCTCCGGC
GGCCGGCTCCGGCTCGGCCTCGGCTCGCAGGTGAAGGCGCACATCACCCGCCGTTTCTCGATGCCGTGGGGCCGGCCCGC
GCCACAGCTGCGCGAGTTCGTCCTGGCGCTGCGCGCGATCTGGTCGTCCTGGTCGGAGGGCACCCCGCTCGCCTTCGAGG
GCGAGTACTACCGGCACACGTTGATGCCGCCGGCGTTCGTCCCGAAGCCGCACCCTTTCGGGCCACCCCAGGTGCTCCTC
GCCGGCGTCGGGGACGTCATGACCCGGGTCGCGGGCGAGGTCGCCGACGGATTCCTGTGCCACTGGTTCACCAGCCCGCG
CTGGATCCGCGAGCACACCGTTCCCGCGCTGCTGGCGGGCCGGCAGCGCGCGGGCCGCACGCTGGACGGCTTCGACATCG
TCGCCGGCGGGTTCGTCGCCACCGGCACCGACCAGGAGATCACCGAAGGGCTGGCAAGGATGCGCGCCCAGATCTCCTTC
TACGGGTCGACCCCGGCCTACCGCGCCGTGCTCGAGCTGCACGGCTGGGGCGATCTCGGCAGCGAGCTGACCGCGCTGTC
CAAGCAGAACCGGTGGACCGAGATGGCCGCCCTGATCGACGACGACGTCGTCGAGACCTTCGGCATCGTCGCGGCGCCCG
CGGACGTCCCCGCCCGCATCGCCGAGCGCCTCGGCGGCCTGGCGACCCGCACGACGTTCACGCCGCCGCCGTCGTTCGGC
CCCGAGCAGACCCGGGAGATTCTGGCCGCCATCCAGGCGATCCCGACCGCGGCTCCGACCACCGGCGCGGCGGGCCGGCA
CCGGACCGGACCCGCGTAA

Upstream 100 bases:

>100_bases
CGCGTCGGCCCCGGCGCCGACCGTCCGTCCGCTGTTAGCTTTCAGGACATACGAGCCCCGCGGGAGGCGGCCCGCGGGGC
GACGTCGAGGAGGCGGCAAC

Downstream 100 bases:

>100_bases
CCAGACCCGGTCCCGGACTCCCCGCGCGGCGCGCGGCGCGCGCCGCGCGGGGAGATGCTCACTCAGACCTTGATGGGCAG
CTTCTCGTAGCCGCGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKVDSTLGSLDIAAGQARAAQAAGYDAIWTGEVNQDPFLPLTLAADATSAIELGTSITVALSRSPMSLAYTAHDLHGFSG
GRLRLGLGSQVKAHITRRFSMPWGRPAPQLREFVLALRAIWSSWSEGTPLAFEGEYYRHTLMPPAFVPKPHPFGPPQVLL
AGVGDVMTRVAGEVADGFLCHWFTSPRWIREHTVPALLAGRQRAGRTLDGFDIVAGGFVATGTDQEITEGLARMRAQISF
YGSTPAYRAVLELHGWGDLGSELTALSKQNRWTEMAALIDDDVVETFGIVAAPADVPARIAERLGGLATRTTFTPPPSFG
PEQTREILAAIQAIPTAAPTTGAAGRHRTGPA

Sequences:

>Translated_352_residues
MKVDSTLGSLDIAAGQARAAQAAGYDAIWTGEVNQDPFLPLTLAADATSAIELGTSITVALSRSPMSLAYTAHDLHGFSG
GRLRLGLGSQVKAHITRRFSMPWGRPAPQLREFVLALRAIWSSWSEGTPLAFEGEYYRHTLMPPAFVPKPHPFGPPQVLL
AGVGDVMTRVAGEVADGFLCHWFTSPRWIREHTVPALLAGRQRAGRTLDGFDIVAGGFVATGTDQEITEGLARMRAQISF
YGSTPAYRAVLELHGWGDLGSELTALSKQNRWTEMAALIDDDVVETFGIVAAPADVPARIAERLGGLATRTTFTPPPSFG
PEQTREILAAIQAIPTAAPTTGAAGRHRTGPA
>Mature_352_residues
MKVDSTLGSLDIAAGQARAAQAAGYDAIWTGEVNQDPFLPLTLAADATSAIELGTSITVALSRSPMSLAYTAHDLHGFSG
GRLRLGLGSQVKAHITRRFSMPWGRPAPQLREFVLALRAIWSSWSEGTPLAFEGEYYRHTLMPPAFVPKPHPFGPPQVLL
AGVGDVMTRVAGEVADGFLCHWFTSPRWIREHTVPALLAGRQRAGRTLDGFDIVAGGFVATGTDQEITEGLARMRAQISF
YGSTPAYRAVLELHGWGDLGSELTALSKQNRWTEMAALIDDDVVETFGIVAAPADVPARIAERLGGLATRTTFTPPPSFG
PEQTREILAAIQAIPTAAPTTGAAGRHRTGPA

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019919
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 37575; Mature: 37575

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDSTLGSLDIAAGQARAAQAAGYDAIWTGEVNQDPFLPLTLAADATSAIELGTSITVA
CCCCCCCCCEEECCCCHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCHHHHCCCEEEEE
LSRSPMSLAYTAHDLHGFSGGRLRLGLGSQVKAHITRRFSMPWGRPAPQLREFVLALRAI
EECCCCEEEEEHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
WSSWSEGTPLAFEGEYYRHTLMPPAFVPKPHPFGPPQVLLAGVGDVMTRVAGEVADGFLC
HHCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
HWFTSPRWIREHTVPALLAGRQRAGRTLDGFDIVAGGFVATGTDQEITEGLARMRAQISF
EECCCCHHHHHHCHHHHHHCHHHCCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHEEE
YGSTPAYRAVLELHGWGDLGSELTALSKQNRWTEMAALIDDDVVETFGIVAAPADVPARI
ECCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCHHHH
AERLGGLATRTTFTPPPSFGPEQTREILAAIQAIPTAAPTTGAAGRHRTGPA
HHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVDSTLGSLDIAAGQARAAQAAGYDAIWTGEVNQDPFLPLTLAADATSAIELGTSITVA
CCCCCCCCCEEECCCCHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCHHHHCCCEEEEE
LSRSPMSLAYTAHDLHGFSGGRLRLGLGSQVKAHITRRFSMPWGRPAPQLREFVLALRAI
EECCCCEEEEEHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
WSSWSEGTPLAFEGEYYRHTLMPPAFVPKPHPFGPPQVLLAGVGDVMTRVAGEVADGFLC
HHCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
HWFTSPRWIREHTVPALLAGRQRAGRTLDGFDIVAGGFVATGTDQEITEGLARMRAQISF
EECCCCHHHHHHCHHHHHHCHHHCCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHEEE
YGSTPAYRAVLELHGWGDLGSELTALSKQNRWTEMAALIDDDVVETFGIVAAPADVPARI
ECCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCHHHH
AERLGGLATRTTFTPPPSFGPEQTREILAAIQAIPTAAPTTGAAGRHRTGPA
HHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]