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The map label for this gene is iap [H]

Identifier: 158318263

GI number: 158318263

Start: 7938319

End: 7939497

Strand: Direct

Name: iap [H]

Synonym: Franean1_6528

Alternate gene names: 158318263

Gene position: 7938319-7939497 (Clockwise)

Preceding gene: 158318262

Following gene: 158318267

Centisome position: 88.38

GC content: 68.11

Gene sequence:

>1179_bases
ATGGACCGGGCAGCCCAGCCCGAACCCGACAGCTCACCTCGCAGGCGTACGGGAAGGAACGCAACGTTGTCTGCGCAAAG
TGTGCAGCTTGATGCTGAGAGACGCCGGCAGGAAGGGCGCGGTCGCCACCGTGCGCCGTCCGCCCCCACGGCGTCCAGCC
GAGCCAGAGCCAGGGCCCGTACCGTCGCGGCCATCACCACCGGAACCGTCGCGGTCTCCGGGGTGGCGCTCGCCGGGTGC
GCCCAGGATGTCAACTCGGACGTCGCGCTGGACGACGGCACGAACACCGCCCCGATGACGCTCGCGACCCAGATCGGGTC
CCGGCTGGCGGTCGACGGAGCCATCCAGGCCGCCACCGCTACCGGCGGCGGTTCGGGCACCGTTCTCGACGCCACCACGG
ACATCTCCGCGCCGACTCTCTCGTCGAAGATCGACGTCGGCCTGCGCGTGACGAACCCCGAGGTCACGGTCAACGCGGAC
GAGCCCGTCAACATCGGCTTCTCGCTCTACAACGAGGAGACCCAGGCCCCGATCCCGGACCAGCTCATCAAGGTCCAGGT
CAAGCTGCCGACCGGGTGGGCGACCTTCCTGCACCTGACGACGGACGACCGCGGCTTCGCGTCGTACACCGCGAAGGTGC
TCACCACCACGAATGTCACGGCGATCTTCGACGGCACTGACGCCCTCCAGTCGGCGCACTCGGAGAACGACGCCACGCTG
CACGTCCGCCCGGCTCCGCCGCCGGTGCCCGCACAGGCCTCCCGCAGCGCGGACCGCACGGGCGTGAACGTCAACACCCC
GGTGGTCAGCGTCAACCTGCCGACCAACACCCTCGGTGAGAAGGCCGTCTACCTGGCCTCGCTACAGGCCGGCAAGCCGT
ACGTCTACGGCGCCGAGGGTCCCAACGCCTTCGACTGCTCCGGTCTCGTGCAGTACATCTATCGGCAGCTCGGCAAGAGC
CTGCCGCGTACCACCGACCAGCAGTACGCGGCCACCACCCATATCTCCCAGTACAACAAGGCGCCCGGCGACCTGATCTT
CTTCGGGAGCCCCGGAAACATCTACCACATGGGCATCTACGCCGGCGACGGCAAGATGTGGGTCGCGCCCCGCACTGGTG
ATGTCGTCAAGCTTCAGACGATCTACACGACCTCGTACTTGGTCGGCCGCGTCACCTGA

Upstream 100 bases:

>100_bases
AGTCGTCACCACGGGCAGGAGCGGGGGACCCACCTCCACCGGCTGGCGCCACGACACGGCGCTGGCCTAGGGGTGAAGTC
CATCGCGTGAAGGTCGCGCT

Downstream 100 bases:

>100_bases
GAACGGCGGGCCCACGGCCCAGCCAGGAGACTGGCTGTTCTCGACGTCGATCGTTCCACAAGCCCACGCACCGCTCGGAC
GGGGCTGCCCGAACGCAGAC

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MDRAAQPEPDSSPRRRTGRNATLSAQSVQLDAERRRQEGRGRHRAPSAPTASSRARARARTVAAITTGTVAVSGVALAGC
AQDVNSDVALDDGTNTAPMTLATQIGSRLAVDGAIQAATATGGGSGTVLDATTDISAPTLSSKIDVGLRVTNPEVTVNAD
EPVNIGFSLYNEETQAPIPDQLIKVQVKLPTGWATFLHLTTDDRGFASYTAKVLTTTNVTAIFDGTDALQSAHSENDATL
HVRPAPPPVPAQASRSADRTGVNVNTPVVSVNLPTNTLGEKAVYLASLQAGKPYVYGAEGPNAFDCSGLVQYIYRQLGKS
LPRTTDQQYAATTHISQYNKAPGDLIFFGSPGNIYHMGIYAGDGKMWVAPRTGDVVKLQTIYTTSYLVGRVT

Sequences:

>Translated_392_residues
MDRAAQPEPDSSPRRRTGRNATLSAQSVQLDAERRRQEGRGRHRAPSAPTASSRARARARTVAAITTGTVAVSGVALAGC
AQDVNSDVALDDGTNTAPMTLATQIGSRLAVDGAIQAATATGGGSGTVLDATTDISAPTLSSKIDVGLRVTNPEVTVNAD
EPVNIGFSLYNEETQAPIPDQLIKVQVKLPTGWATFLHLTTDDRGFASYTAKVLTTTNVTAIFDGTDALQSAHSENDATL
HVRPAPPPVPAQASRSADRTGVNVNTPVVSVNLPTNTLGEKAVYLASLQAGKPYVYGAEGPNAFDCSGLVQYIYRQLGKS
LPRTTDQQYAATTHISQYNKAPGDLIFFGSPGNIYHMGIYAGDGKMWVAPRTGDVVKLQTIYTTSYLVGRVT
>Mature_392_residues
MDRAAQPEPDSSPRRRTGRNATLSAQSVQLDAERRRQEGRGRHRAPSAPTASSRARARARTVAAITTGTVAVSGVALAGC
AQDVNSDVALDDGTNTAPMTLATQIGSRLAVDGAIQAATATGGGSGTVLDATTDISAPTLSSKIDVGLRVTNPEVTVNAD
EPVNIGFSLYNEETQAPIPDQLIKVQVKLPTGWATFLHLTTDDRGFASYTAKVLTTTNVTAIFDGTDALQSAHSENDATL
HVRPAPPPVPAQASRSADRTGVNVNTPVVSVNLPTNTLGEKAVYLASLQAGKPYVYGAEGPNAFDCSGLVQYIYRQLGKS
LPRTTDQQYAATTHISQYNKAPGDLIFFGSPGNIYHMGIYAGDGKMWVAPRTGDVVKLQTIYTTSYLVGRVT

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=153, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1787944, Length=112, Percent_Identity=39.2857142857143, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 41284; Mature: 41284

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRAAQPEPDSSPRRRTGRNATLSAQSVQLDAERRRQEGRGRHRAPSAPTASSRARARAR
CCCCCCCCCCCCCHHHCCCCCEEEHHEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHE
TVAAITTGTVAVSGVALAGCAQDVNSDVALDDGTNTAPMTLATQIGSRLAVDGAIQAATA
EEEEEEECCEEECCEEEEHHHHHCCCCEEECCCCCCCCEEHHHHHCCEEEECCCEEEEEE
TGGGSGTVLDATTDISAPTLSSKIDVGLRVTNPEVTVNADEPVNIGFSLYNEETQAPIPD
CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEECEEEECCCCCCCCCC
QLIKVQVKLPTGWATFLHLTTDDRGFASYTAKVLTTTNVTAIFDGTDALQSAHSENDATL
CEEEEEEECCCCEEEEEEEECCCCCCHHEEEEEEEECCEEEEECCHHHHHHCCCCCCCEE
HVRPAPPPVPAQASRSADRTGVNVNTPVVSVNLPTNTLGEKAVYLASLQAGKPYVYGAEG
EEECCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEEEECCCCCEEEECCC
PNAFDCSGLVQYIYRQLGKSLPRTTDQQYAATTHISQYNKAPGDLIFFGSPGNIYHMGIY
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEE
AGDGKMWVAPRTGDVVKLQTIYTTSYLVGRVT
ECCCEEEEECCCCCEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MDRAAQPEPDSSPRRRTGRNATLSAQSVQLDAERRRQEGRGRHRAPSAPTASSRARARAR
CCCCCCCCCCCCCHHHCCCCCEEEHHEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHE
TVAAITTGTVAVSGVALAGCAQDVNSDVALDDGTNTAPMTLATQIGSRLAVDGAIQAATA
EEEEEEECCEEECCEEEEHHHHHCCCCEEECCCCCCCCEEHHHHHCCEEEECCCEEEEEE
TGGGSGTVLDATTDISAPTLSSKIDVGLRVTNPEVTVNADEPVNIGFSLYNEETQAPIPD
CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEECEEEECCCCCCCCCC
QLIKVQVKLPTGWATFLHLTTDDRGFASYTAKVLTTTNVTAIFDGTDALQSAHSENDATL
CEEEEEEECCCCEEEEEEEECCCCCCHHEEEEEEEECCEEEEECCHHHHHHCCCCCCCEE
HVRPAPPPVPAQASRSADRTGVNVNTPVVSVNLPTNTLGEKAVYLASLQAGKPYVYGAEG
EEECCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEEEECCCCCEEEECCC
PNAFDCSGLVQYIYRQLGKSLPRTTDQQYAATTHISQYNKAPGDLIFFGSPGNIYHMGIY
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEE
AGDGKMWVAPRTGDVVKLQTIYTTSYLVGRVT
ECCCEEEEECCCCCEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2111287; 1459966; 11679669 [H]