Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318267

Identifier: 158318267

GI number: 158318267

Start: 7943648

End: 7944133

Strand: Direct

Name: 158318267

Synonym: Franean1_6532

Alternate gene names: NA

Gene position: 7943648-7944133 (Clockwise)

Preceding gene: 158318263

Following gene: 158318268

Centisome position: 88.44

GC content: 70.99

Gene sequence:

>486_bases
GTGACCACCAAGGGGATAGCGATCGCCCGTGACGGCGAGCGATGGACGGCTCACGACCTCGACATCGCCGACATGGAGGA
TCTCGACGCGCTCGTCGACGCCATGCACGACCTCTCCTCGGGCACGGTCATCGCGTTCGTCGAGGAGGACGACGAGTACC
TGGCCATCGTGCGCATCGGCGCGCAGGACCCCGATCCGGGGGTCTTCCTCTCGGACCGCCGGGCCCTGCTGAGCTCCGAC
CTCGCCGAGCGGCTCTTCGCCGACGCGCTCCCGTCCATGGTGGCGCTCGAGGACGACTCGGAGGACGACGCCCCGGTGGG
CCAGGCGTCCCCCGTCGGCGACCTCGACCTGCTGGCGGATCTCGGGACGACCGCCGATGCGCTGCTGGAGCTGATCGCCG
AGGAGGGCATGCTGCCCGCCGACGTGATCAGCGCGGTCAGCGAGCGGGCCGGCGCCGGGGAGATCTTCGACGAGGTCCGT
GGCTGA

Upstream 100 bases:

>100_bases
GAGAATCACAGAAGTGATGGGGCATCACCCCGGGTCGGCGGACGCACAGATCACGTGAGGACACGTGAGGACCCGGCGGG
AAGGGACGTGAGGACAGACA

Downstream 100 bases:

>100_bases
CACCCGCTCACCGGTGTCTGCCACCGGCCCGCCGGTGACGGTCACCCGCGCACCGGTGACGGACGGCTACCGCGAGGCGA
TGGGCCTCGCCCTGGCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTTKGIAIARDGERWTAHDLDIADMEDLDALVDAMHDLSSGTVIAFVEEDDEYLAIVRIGAQDPDPGVFLSDRRALLSSD
LAERLFADALPSMVALEDDSEDDAPVGQASPVGDLDLLADLGTTADALLELIAEEGMLPADVISAVSERAGAGEIFDEVR
G

Sequences:

>Translated_161_residues
MTTKGIAIARDGERWTAHDLDIADMEDLDALVDAMHDLSSGTVIAFVEEDDEYLAIVRIGAQDPDPGVFLSDRRALLSSD
LAERLFADALPSMVALEDDSEDDAPVGQASPVGDLDLLADLGTTADALLELIAEEGMLPADVISAVSERAGAGEIFDEVR
G
>Mature_160_residues
TTKGIAIARDGERWTAHDLDIADMEDLDALVDAMHDLSSGTVIAFVEEDDEYLAIVRIGAQDPDPGVFLSDRRALLSSDL
AERLFADALPSMVALEDDSEDDAPVGQASPVGDLDLLADLGTTADALLELIAEEGMLPADVISAVSERAGAGEIFDEVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17028; Mature: 16897

Theoretical pI: Translated: 3.59; Mature: 3.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKGIAIARDGERWTAHDLDIADMEDLDALVDAMHDLSSGTVIAFVEEDDEYLAIVRIG
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEC
AQDPDPGVFLSDRRALLSSDLAERLFADALPSMVALEDDSEDDAPVGQASPVGDLDLLAD
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH
LGTTADALLELIAEEGMLPADVISAVSERAGAGEIFDEVRG
CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
TTKGIAIARDGERWTAHDLDIADMEDLDALVDAMHDLSSGTVIAFVEEDDEYLAIVRIG
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEC
AQDPDPGVFLSDRRALLSSDLAERLFADALPSMVALEDDSEDDAPVGQASPVGDLDLLAD
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH
LGTTADALLELIAEEGMLPADVISAVSERAGAGEIFDEVRG
CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA