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The map label for this gene is fdoI [C]

Identifier: 158318251

GI number: 158318251

Start: 7924291

End: 7924968

Strand: Direct

Name: fdoI [C]

Synonym: Franean1_6516

Alternate gene names: 158318251

Gene position: 7924291-7924968 (Clockwise)

Preceding gene: 158318250

Following gene: 158318253

Centisome position: 88.22

GC content: 73.16

Gene sequence:

>678_bases
ATGAGCCCGTATGAGGATCCGGCCGGGAACCCTGAGGATCCGGCCGAGGCGACGGCCGGAGACGGGGCGGCGGCGTTCGT
CCGCCGGTTCGGCCCGGCGACCCGCTGGGCGCACTGGAGCACCGCGGCGCTGACGGCGGTGTGCCTGGCGACGGCGGCCG
TCCTGTATCTCGGGCCGCTGGCGACGCTGGTGGGCCGGCGCCAGCTGGTCTCGGCGGTGCATCTCTACGCCGGGCTCTCC
CTGCCGGTACCGATGCTGGCCGCGGCCCTCTCCGCCGCATACCGGCATGACCTCGCAGAGCTCGACCGCTTCACCCCCGC
CGACTGGAAGTGGCTACGGACGAGACCACGCCGCCGGCACACCGACGCGGTCGGCAAGTTCAACGCGGGGCAGAAGCTGT
ACGCCGCGTTCGTCGCAGGTGCCATGCTCGTCATGCTCGGCACCGGTGTGATCATGGAGTTCGGCGGCGCCTTCGCCGTC
ACCTACCGCACCGGTGCCACCTTCGTGCACGATCTGCTGGCCCTCGGCCTGTTCGCCGGGATCTGCGGCCACCTGTGGAT
GGCCTCCCGCGACCCGGCCGCCCGGCTCGGGATGCGCACCGGCGTGGTCCCCCGCCCCTGGGCCCTGCGCGAACACCCCG
CCTGGCACACCGAACCCGACGCACCGCCGACCGAGTGA

Upstream 100 bases:

>100_bases
CTCGCCGAGATCGAGGTGGTCGACACCGTCACTCCCGGGTTCTGGGAGCAGCGTGGCTACGACGTCGACGGCTGGATCGG
AAAGTCGAACGGCCGCGACG

Downstream 100 bases:

>100_bases
CCCGACTTGCCGGTCCGCGGCCAGGTCTCAGACCGACCAGGCCACGGACCGGCACAGCGCGGGCCGGGAGAGTCCTAGCC
CGAGTAGGTACCCGAGGCGT

Product: putative formate dehydrogenase

Products: CO2; NADH2 [C]

Alternate protein names: Formate Dehydrogenase Gamma Subunit; Cytochrome

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSPYEDPAGNPEDPAEATAGDGAAAFVRRFGPATRWAHWSTAALTAVCLATAAVLYLGPLATLVGRRQLVSAVHLYAGLS
LPVPMLAAALSAAYRHDLAELDRFTPADWKWLRTRPRRRHTDAVGKFNAGQKLYAAFVAGAMLVMLGTGVIMEFGGAFAV
TYRTGATFVHDLLALGLFAGICGHLWMASRDPAARLGMRTGVVPRPWALREHPAWHTEPDAPPTE

Sequences:

>Translated_225_residues
MSPYEDPAGNPEDPAEATAGDGAAAFVRRFGPATRWAHWSTAALTAVCLATAAVLYLGPLATLVGRRQLVSAVHLYAGLS
LPVPMLAAALSAAYRHDLAELDRFTPADWKWLRTRPRRRHTDAVGKFNAGQKLYAAFVAGAMLVMLGTGVIMEFGGAFAV
TYRTGATFVHDLLALGLFAGICGHLWMASRDPAARLGMRTGVVPRPWALREHPAWHTEPDAPPTE
>Mature_224_residues
SPYEDPAGNPEDPAEATAGDGAAAFVRRFGPATRWAHWSTAALTAVCLATAAVLYLGPLATLVGRRQLVSAVHLYAGLSL
PVPMLAAALSAAYRHDLAELDRFTPADWKWLRTRPRRRHTDAVGKFNAGQKLYAAFVAGAMLVMLGTGVIMEFGGAFAVT
YRTGATFVHDLLALGLFAGICGHLWMASRDPAARLGMRTGVVPRPWALREHPAWHTEPDAPPTE

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24171; Mature: 24040

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPYEDPAGNPEDPAEATAGDGAAAFVRRFGPATRWAHWSTAALTAVCLATAAVLYLGPL
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ATLVGRRQLVSAVHLYAGLSLPVPMLAAALSAAYRHDLAELDRFTPADWKWLRTRPRRRH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHH
TDAVGKFNAGQKLYAAFVAGAMLVMLGTGVIMEFGGAFAVTYRTGATFVHDLLALGLFAG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
ICGHLWMASRDPAARLGMRTGVVPRPWALREHPAWHTEPDAPPTE
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPYEDPAGNPEDPAEATAGDGAAAFVRRFGPATRWAHWSTAALTAVCLATAAVLYLGPL
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ATLVGRRQLVSAVHLYAGLSLPVPMLAAALSAAYRHDLAELDRFTPADWKWLRTRPRRRH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHH
TDAVGKFNAGQKLYAAFVAGAMLVMLGTGVIMEFGGAFAVTYRTGATFVHDLLALGLFAG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
ICGHLWMASRDPAARLGMRTGVVPRPWALREHPAWHTEPDAPPTE
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD [C]

Specific reaction: formate + NAD = CO2 + NADH2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA