| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yuiH [H]
Identifier: 158318250
GI number: 158318250
Start: 7923621
End: 7924304
Strand: Direct
Name: yuiH [H]
Synonym: Franean1_6515
Alternate gene names: 158318250
Gene position: 7923621-7924304 (Clockwise)
Preceding gene: 158318249
Following gene: 158318251
Centisome position: 88.22
GC content: 70.47
Gene sequence:
>684_bases GTGGGACGGCGGGTCGTCTTCGCCATGCTCGGCCTCGGGGCGCTGGGCGTCGCCGTCGGCGCGGACGTGCAGCGCGGCAC CGACCAGTTCGTCGCCCCACTGCGCGAGAACGACCCGACGGGGCTCACCGACCTGCTCCCCTCCGGCGGGTTCCGCTACT ACTCCGTCGTCGCCTCCGTGCCGGAGCGGACATCCGCGGACTACGAACTGCGGGTCCACGGCCTGGTCGACCGGCCCCTC ACCCTCACCCTGGACGATCTCTCCCGGATGCCACAGACCGAGCTCGTGCGCGACTTCCAGTGTGTGACGGGCTGGCGGGT CACCAGCGTCCGCTGGACGGGCGTGCGCCTCGCGGACCTGCTGGACGCGGCCGGCACCCGCCCCGGGGCGACTGCGCTGA CCTTCCGTTCTTTCGACGGCGCCTACGCCGAGAGCCTGACGATCGACCAGGCCCGCAGGCCCGACGTCCTGGTCGCCCTC ACCATGCTGGACGGCCCGATCACCCACGATCATGGTGGCCCCGTCCGGCTGTACGTGGCGCCGATGTACGGCTACAAGTC CATCAAGTGGCTCGCCGAGATCGAGGTGGTCGACACCGTCACTCCCGGGTTCTGGGAGCAGCGTGGCTACGACGTCGACG GCTGGATCGGAAAGTCGAACGGCCGCGACGATGAGCCCGTATGA
Upstream 100 bases:
>100_bases TGCGCTCCCGTCCGACAGGGGGATTCGTCCATCTCGCCCAGGCGGGTGGCCGGATCTCCCCGTCGCGGCGTTGACTGTGT GCATGGCCGAAGGGACACCG
Downstream 100 bases:
>100_bases GGATCCGGCCGGGAACCCTGAGGATCCGGCCGAGGCGACGGCCGGAGACGGGGCGGCGGCGTTCGTCCGCCGGTTCGGCC CGGCGACCCGCTGGGCGCAC
Product: molybdopterin binding oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGRRVVFAMLGLGALGVAVGADVQRGTDQFVAPLRENDPTGLTDLLPSGGFRYYSVVASVPERTSADYELRVHGLVDRPL TLTLDDLSRMPQTELVRDFQCVTGWRVTSVRWTGVRLADLLDAAGTRPGATALTFRSFDGAYAESLTIDQARRPDVLVAL TMLDGPITHDHGGPVRLYVAPMYGYKSIKWLAEIEVVDTVTPGFWEQRGYDVDGWIGKSNGRDDEPV
Sequences:
>Translated_227_residues MGRRVVFAMLGLGALGVAVGADVQRGTDQFVAPLRENDPTGLTDLLPSGGFRYYSVVASVPERTSADYELRVHGLVDRPL TLTLDDLSRMPQTELVRDFQCVTGWRVTSVRWTGVRLADLLDAAGTRPGATALTFRSFDGAYAESLTIDQARRPDVLVAL TMLDGPITHDHGGPVRLYVAPMYGYKSIKWLAEIEVVDTVTPGFWEQRGYDVDGWIGKSNGRDDEPV >Mature_226_residues GRRVVFAMLGLGALGVAVGADVQRGTDQFVAPLRENDPTGLTDLLPSGGFRYYSVVASVPERTSADYELRVHGLVDRPLT LTLDDLSRMPQTELVRDFQCVTGWRVTSVRWTGVRLADLLDAAGTRPGATALTFRSFDGAYAESLTIDQARRPDVLVALT MLDGPITHDHGGPVRLYVAPMYGYKSIKWLAEIEVVDTVTPGFWEQRGYDVDGWIGKSNGRDDEPV
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788282, Length=270, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71992535, Length=178, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI18859905, Length=179, Percent_Identity=30.1675977653631, Blast_Score=78, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 24901; Mature: 24770
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRVVFAMLGLGALGVAVGADVQRGTDQFVAPLRENDPTGLTDLLPSGGFRYYSVVASV CCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCEEEHEEECC PERTSADYELRVHGLVDRPLTLTLDDLSRMPQTELVRDFQCVTGWRVTSVRWTGVRLADL CCCCCCCEEEEEEEEECCCEEEEHHHHHCCCHHHHHHHHHHHCCEEEEEEEECCCHHHHH LDAAGTRPGATALTFRSFDGAYAESLTIDQARRPDVLVALTMLDGPITHDHGGPVRLYVA HHHCCCCCCCEEEEEECCCCCHHHEEECCCCCCCCEEEEEEECCCCEECCCCCEEEEEEE PMYGYKSIKWLAEIEVVDTVTPGFWEQRGYDVDGWIGKSNGRDDEPV ECCCCCCEEEEEEEEEEECCCCCCHHHCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure GRRVVFAMLGLGALGVAVGADVQRGTDQFVAPLRENDPTGLTDLLPSGGFRYYSVVASV CCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCEEEHEEECC PERTSADYELRVHGLVDRPLTLTLDDLSRMPQTELVRDFQCVTGWRVTSVRWTGVRLADL CCCCCCCEEEEEEEEECCCEEEEHHHHHCCCHHHHHHHHHHHCCEEEEEEEECCCHHHHH LDAAGTRPGATALTFRSFDGAYAESLTIDQARRPDVLVALTMLDGPITHDHGGPVRLYVA HHHCCCCCCCEEEEEECCCCCHHHEEECCCCCCCCEEEEEEECCCCEECCCCCEEEEEEE PMYGYKSIKWLAEIEVVDTVTPGFWEQRGYDVDGWIGKSNGRDDEPV ECCCCCCEEEEEEEEEEECCCCCCHHHCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]