| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318245
Identifier: 158318245
GI number: 158318245
Start: 7918600
End: 7920141
Strand: Direct
Name: 158318245
Synonym: Franean1_6510
Alternate gene names: NA
Gene position: 7918600-7920141 (Clockwise)
Preceding gene: 158318244
Following gene: 158318246
Centisome position: 88.16
GC content: 74.84
Gene sequence:
>1542_bases GTGCGTGACCGGGCGACCCGACTGACCGCGGCACGCGGCCTGTGGAACCGCCTGGAGGTCATCGCGGGACTCGAGGGCTT CCCCCGTTACCCGGGCAGCGCGCTGATCGCGCGGATTCCCGCCGGACCGGCCCGCCGAGCCGGGACCGCGGTGGCCGGTG ACGTCCTGCCCACCGCCGTCGTCGGCCTGATCCTGCTGGTCGGGTCGACGAACGCTTCGAAGGACCAGATCCCGCCCGGG CACGCCCTGGACGGGGTCGCCTACCTGCTCCTGGCGCTGGCGGTGGCCGTCTTCCCGTTGCGCAGGTACGCCCCGCGGGT CCTGCTCGCCGCCGAGACCCTGATCATCGGCAGTTACACCGCCATCGGCTATCCGCACGGGCCGGCGACGCTCGCGGTCG CCGCGGCCGCCTTCACCGTGGGCGTGCGGGTGCCCGCACGGGTGACCGGCCGCGCGGCGAAGATGTGCGCGGCGGTGCTG CTGCTCGCCAGCATGGCGTCGTTCTCCCGCGGCTACCTCGACAGCAGGTGGGATCTCGTCTACACCTGCCTCGGTGTCCT CTGCGTGGCCTTCATTCCGGCTTTGCTGGGCGCGCTGCTGCGGCTGAGCCGGCTGTCCTCGGCGCGGGCGGAGGAGGAGG CCACCCGGCGGCGGATCGAGCAGGAGCGGCTGCGGATGGCCCGCGAGGTCCACGACGTCGTCGGCCACGGGCTCTCGATC ATCTCGCTCCAGGCAGCGGTGGCTCTGCATGTGCTCGACCGGCGGCCGGAGCAGGCGCAGATCGCGCTGGAGGCGATCCG CCGCACCAGCGTGGACGCACTGGACGAGCTGCGGGCGACCCTCGCCCTCACCCGCGCCCGCGACGCCCGGTCCAGAGCCG GGAACGCCCGGGAAGCGGAAAGCACCGTGCTCGCCGGGAACACCATGCTCTGCGGGAACACCGCGCTCGCCGGGAACACC GCGCGTCCAGCGCACCCCGGAGGCGACAGAAGCGCCGAGCACTTTGGAAGCCGGGCCGGAGGCGCGGAGCGCGCCGGGCG CGGCGAGGGCACCGGGCGCGGCGAGGGCGCGGCGGGCACCGATCCCGGTGAGGCGCTCCGGACGCCGTTGACCGGGCTGA GCCGGCTGCCGGGGCTGGTCTCCGAGGTCCGGCTGTGCGGCATCGCCGTGGAACTGGTGACCGATGGTGATCTTGCCGGC CTGCCCGCCGAGGTCGATCTCGCCGCCTACCGGATCGTCCAGGAGTCGCTGACGAACGTGCTGCGGCACGCCGGACCGGC CCGGGCCCGGGTCACCCTCCGCTCCACCGCGGACCACCTGGAGGTCGAGATCGTCGACGAGCCCACCGAGCGCAGCGCCG ACCTGCCCGCCGACGGTGACCCGCTCGTCCGCTCGACCGGGCACGGGCTGCGCGGCCTGCGTGAACGCGTGGACGAGCTC GGCGGGTCCCTGACGGCGGGCCCGCGTCCGCAGGGAGGATGGAGCGTGCGCACCGACCTGCCCACGCCGGCCGTGTCCCG CCGCTCCGGAGGGGCCCGGTGA
Upstream 100 bases:
>100_bases ACGAGCTGAGCACACCTCACAGACTGAAAGCACCGCACAGACTGAAAGCACCGCACAGGCCGAGCGCACCTCACAGGCGG AGCGCCCATCTCGGACCGGA
Downstream 100 bases:
>100_bases TCCGGGTCGTGGTCGCCGACGATCAGCCTCTCGTCCGTCTCGGGCTGAAGGTCCTGATCGAGACCGAGGACGACCTCGAG CTCACCGGCGAGGCCGAGGA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Histidine Kinase; Two Component System Sensor Kinase; Two Component Sensor Kinase; Signal Transduction Histidine Kinase; Histidine Kinase Dimerisation And Phosphoacceptor Region; Signal Transduction Histidine Kinase-Like Protein; Two-Component Sensor Kinase; Two Component Transcriptional Regulator; Two-Component System Histidine Kinase; Histidine Kinase Dimerization And Phosphoacceptor Region; Two-Component Histidine Kinase; Two-Component Sensor; Sensor Kinase Two-Component System; LOW QUALITY PROTEIN Two Component Sensor Kinase; Sensor Kinase; Two-Component Sensor Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component System Response Regulator; Two-Component System Sensor Protein
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MRDRATRLTAARGLWNRLEVIAGLEGFPRYPGSALIARIPAGPARRAGTAVAGDVLPTAVVGLILLVGSTNASKDQIPPG HALDGVAYLLLALAVAVFPLRRYAPRVLLAAETLIIGSYTAIGYPHGPATLAVAAAAFTVGVRVPARVTGRAAKMCAAVL LLASMASFSRGYLDSRWDLVYTCLGVLCVAFIPALLGALLRLSRLSSARAEEEATRRRIEQERLRMAREVHDVVGHGLSI ISLQAAVALHVLDRRPEQAQIALEAIRRTSVDALDELRATLALTRARDARSRAGNAREAESTVLAGNTMLCGNTALAGNT ARPAHPGGDRSAEHFGSRAGGAERAGRGEGTGRGEGAAGTDPGEALRTPLTGLSRLPGLVSEVRLCGIAVELVTDGDLAG LPAEVDLAAYRIVQESLTNVLRHAGPARARVTLRSTADHLEVEIVDEPTERSADLPADGDPLVRSTGHGLRGLRERVDEL GGSLTAGPRPQGGWSVRTDLPTPAVSRRSGGAR
Sequences:
>Translated_513_residues MRDRATRLTAARGLWNRLEVIAGLEGFPRYPGSALIARIPAGPARRAGTAVAGDVLPTAVVGLILLVGSTNASKDQIPPG HALDGVAYLLLALAVAVFPLRRYAPRVLLAAETLIIGSYTAIGYPHGPATLAVAAAAFTVGVRVPARVTGRAAKMCAAVL LLASMASFSRGYLDSRWDLVYTCLGVLCVAFIPALLGALLRLSRLSSARAEEEATRRRIEQERLRMAREVHDVVGHGLSI ISLQAAVALHVLDRRPEQAQIALEAIRRTSVDALDELRATLALTRARDARSRAGNAREAESTVLAGNTMLCGNTALAGNT ARPAHPGGDRSAEHFGSRAGGAERAGRGEGTGRGEGAAGTDPGEALRTPLTGLSRLPGLVSEVRLCGIAVELVTDGDLAG LPAEVDLAAYRIVQESLTNVLRHAGPARARVTLRSTADHLEVEIVDEPTERSADLPADGDPLVRSTGHGLRGLRERVDEL GGSLTAGPRPQGGWSVRTDLPTPAVSRRSGGAR >Mature_513_residues MRDRATRLTAARGLWNRLEVIAGLEGFPRYPGSALIARIPAGPARRAGTAVAGDVLPTAVVGLILLVGSTNASKDQIPPG HALDGVAYLLLALAVAVFPLRRYAPRVLLAAETLIIGSYTAIGYPHGPATLAVAAAAFTVGVRVPARVTGRAAKMCAAVL LLASMASFSRGYLDSRWDLVYTCLGVLCVAFIPALLGALLRLSRLSSARAEEEATRRRIEQERLRMAREVHDVVGHGLSI ISLQAAVALHVLDRRPEQAQIALEAIRRTSVDALDELRATLALTRARDARSRAGNAREAESTVLAGNTMLCGNTALAGNT ARPAHPGGDRSAEHFGSRAGGAERAGRGEGTGRGEGAAGTDPGEALRTPLTGLSRLPGLVSEVRLCGIAVELVTDGDLAG LPAEVDLAAYRIVQESLTNVLRHAGPARARVTLRSTADHLEVEIVDEPTERSADLPADGDPLVRSTGHGLRGLRERVDEL GGSLTAGPRPQGGWSVRTDLPTPAVSRRSGGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53740; Mature: 53740
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRATRLTAARGLWNRLEVIAGLEGFPRYPGSALIARIPAGPARRAGTAVAGDVLPTAV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHCCCHHHHHHHHHHH VGLILLVGSTNASKDQIPPGHALDGVAYLLLALAVAVFPLRRYAPRVLLAAETLIIGSYT HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCC AIGYPHGPATLAVAAAAFTVGVRVPARVTGRAAKMCAAVLLLASMASFSRGYLDSRWDLV CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YTCLGVLCVAFIPALLGALLRLSRLSSARAEEEATRRRIEQERLRMAREVHDVVGHGLSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ISLQAAVALHVLDRRPEQAQIALEAIRRTSVDALDELRATLALTRARDARSRAGNAREAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC STVLAGNTMLCGNTALAGNTARPAHPGGDRSAEHFGSRAGGAERAGRGEGTGRGEGAAGT CEEEECCEEEECCCEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DPGEALRTPLTGLSRLPGLVSEVRLCGIAVELVTDGDLAGLPAEVDLAAYRIVQESLTNV CHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LRHAGPARARVTLRSTADHLEVEIVDEPTERSADLPADGDPLVRSTGHGLRGLRERVDEL HHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH GGSLTAGPRPQGGWSVRTDLPTPAVSRRSGGAR CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRDRATRLTAARGLWNRLEVIAGLEGFPRYPGSALIARIPAGPARRAGTAVAGDVLPTAV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHCCCHHHHHHHHHHH VGLILLVGSTNASKDQIPPGHALDGVAYLLLALAVAVFPLRRYAPRVLLAAETLIIGSYT HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCC AIGYPHGPATLAVAAAAFTVGVRVPARVTGRAAKMCAAVLLLASMASFSRGYLDSRWDLV CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YTCLGVLCVAFIPALLGALLRLSRLSSARAEEEATRRRIEQERLRMAREVHDVVGHGLSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ISLQAAVALHVLDRRPEQAQIALEAIRRTSVDALDELRATLALTRARDARSRAGNAREAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC STVLAGNTMLCGNTALAGNTARPAHPGGDRSAEHFGSRAGGAERAGRGEGTGRGEGAAGT CEEEECCEEEECCCEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DPGEALRTPLTGLSRLPGLVSEVRLCGIAVELVTDGDLAGLPAEVDLAAYRIVQESLTNV CHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LRHAGPARARVTLRSTADHLEVEIVDEPTERSADLPADGDPLVRSTGHGLRGLRERVDEL HHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH GGSLTAGPRPQGGWSVRTDLPTPAVSRRSGGAR CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA