| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318230
Identifier: 158318230
GI number: 158318230
Start: 7896269
End: 7897444
Strand: Reverse
Name: 158318230
Synonym: Franean1_6495
Alternate gene names: NA
Gene position: 7897444-7896269 (Counterclockwise)
Preceding gene: 158318236
Following gene: 158318229
Centisome position: 87.92
GC content: 78.66
Gene sequence:
>1176_bases ATGAGCCACGTCGGGCCCGACGACCCGCCCGAGTCCTCGCCGTCGAGCGGGCCGGTCCCGTCACCGGCGGGGGGCAATCC CCAGCCGCTGTCGACGAGCGGGCCGCCGCAGGCGAGCACATGGCCGGCACCGCAGGCAGGTGGTGAGCCGGCGCCGCACG CGACTGGGAGCCACGCGGCTGGAAGTGGGGCCTCCCAGGCGCCCGGCTGGACCGGGTCGCCGGCCTGGAGCGGGCCGCCG CCGCCGGGGCCGGGGTCGGCCCCGGGCGAGGTCTCGTCCCGGGCGGCTGCCTCTCCCGGCGCGCCGGTGCCCGGCGTGAG CCCGCCGCCGCGGGTGGCCTCGGGTGCGCTGCCCCGGTGGAGCCTGGGCCGGACGGCCGTGGCCGGAGCCATCGCGCTCG CTCTCGCCGTCGGCGCGGCGGCCGCGGTCAACGCCAGCAGCCTGGGCTCGGACGGAGCCGGCGGCGGCCCCGGCGGCCTG CGCGGCGGGCCGTTCCAGGTCATGAACCCGGCCGGATCGGCGGTGACGGCGGGTGGCACCGGCACCGGTTCGCTGCACGG GGAGTACGTCACCGCGGACCGCTCCGGCGGCTACACGACCGTCCGGACCCAGTCCGGCGAGGTCACGACAGTGCAGCCCA CCGCCGTCACGGTGCGCAGCACGGACGGCTTCACCGCGACATACACGGTCACGGACGAAACGCTCGTGGACGGCCGCACG GGTGGGATCGGCAACGTCGACGTCGGTGACACCGTCGGGGTCACCGCGACCGTGCCCGATGACGATCCGGCCGACGGCAC CCCGTCGACGTCCACCGCGACCGCGACCGCGATCGTCGAGGAGACCACCGGCCAGGGCCAGGGCCAGGGGCAGACCCAGG GCCAGATTCCGAGTCAGGGGCAGGGGCAGAGTCAGGGGCAGCCGCCGGGCGGAGCGGGCGGCCTGACAGGGCGCGGCGGG CTGGGCGGGGGCGCGTTCCCCGGCTCGCCGCCGGGGCAGGGCACGGCGGCGGGTGGGACGGACCCCACCGTCCAGGGCGG GGCCGCCCCGGTGCCGCCGTTGCCTGGTATGGCAGCCCCGCTCGCGCGGCAGACCGCCCTCGTCCCGTCAGCCACCCGGC TGGAGGGTGGGCGGGGCGGCACCGAGACCGGCACGGCCGTGGCCACCGCCGCCTAG
Upstream 100 bases:
>100_bases ACATAACCAGCGCTCAGCGTCGTCACAGGCTGCGCACAGGTTATCGGCGAAATCTCCTCCCGACGGCGGCGACCGACCCG CCGGGACGAGGAGTTCGGAC
Downstream 100 bases:
>100_bases TTCTGGAACATCATGACCAACCGTGGCCCGCGGTGGCCGCGTCATCGACCCGGCCCCGAACCCCTGCCCCGGGCCTGTCC CGGCAGGTGTCGTCGGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSHVGPDDPPESSPSSGPVPSPAGGNPQPLSTSGPPQASTWPAPQAGGEPAPHATGSHAAGSGASQAPGWTGSPAWSGPP PPGPGSAPGEVSSRAAASPGAPVPGVSPPPRVASGALPRWSLGRTAVAGAIALALAVGAAAAVNASSLGSDGAGGGPGGL RGGPFQVMNPAGSAVTAGGTGTGSLHGEYVTADRSGGYTTVRTQSGEVTTVQPTAVTVRSTDGFTATYTVTDETLVDGRT GGIGNVDVGDTVGVTATVPDDDPADGTPSTSTATATAIVEETTGQGQGQGQTQGQIPSQGQGQSQGQPPGGAGGLTGRGG LGGGAFPGSPPGQGTAAGGTDPTVQGGAAPVPPLPGMAAPLARQTALVPSATRLEGGRGGTETGTAVATAA
Sequences:
>Translated_391_residues MSHVGPDDPPESSPSSGPVPSPAGGNPQPLSTSGPPQASTWPAPQAGGEPAPHATGSHAAGSGASQAPGWTGSPAWSGPP PPGPGSAPGEVSSRAAASPGAPVPGVSPPPRVASGALPRWSLGRTAVAGAIALALAVGAAAAVNASSLGSDGAGGGPGGL RGGPFQVMNPAGSAVTAGGTGTGSLHGEYVTADRSGGYTTVRTQSGEVTTVQPTAVTVRSTDGFTATYTVTDETLVDGRT GGIGNVDVGDTVGVTATVPDDDPADGTPSTSTATATAIVEETTGQGQGQGQTQGQIPSQGQGQSQGQPPGGAGGLTGRGG LGGGAFPGSPPGQGTAAGGTDPTVQGGAAPVPPLPGMAAPLARQTALVPSATRLEGGRGGTETGTAVATAA >Mature_390_residues SHVGPDDPPESSPSSGPVPSPAGGNPQPLSTSGPPQASTWPAPQAGGEPAPHATGSHAAGSGASQAPGWTGSPAWSGPPP PGPGSAPGEVSSRAAASPGAPVPGVSPPPRVASGALPRWSLGRTAVAGAIALALAVGAAAAVNASSLGSDGAGGGPGGLR GGPFQVMNPAGSAVTAGGTGTGSLHGEYVTADRSGGYTTVRTQSGEVTTVQPTAVTVRSTDGFTATYTVTDETLVDGRTG GIGNVDVGDTVGVTATVPDDDPADGTPSTSTATATAIVEETTGQGQGQGQTQGQIPSQGQGQSQGQPPGGAGGLTGRGGL GGGAFPGSPPGQGTAAGGTDPTVQGGAAPVPPLPGMAAPLARQTALVPSATRLEGGRGGTETGTAVATAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36581; Mature: 36450
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVGPDDPPESSPSSGPVPSPAGGNPQPLSTSGPPQASTWPAPQAGGEPAPHATGSHAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGASQAPGWTGSPAWSGPPPPGPGSAPGEVSSRAAASPGAPVPGVSPPPRVASGALPRW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC SLGRTAVAGAIALALAVGAAAAVNASSLGSDGAGGGPGGLRGGPFQVMNPAGSAVTAGGT CCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCC GTGSLHGEYVTADRSGGYTTVRTQSGEVTTVQPTAVTVRSTDGFTATYTVTDETLVDGRT CCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCEEEEECCCCEEEEEEECCCEEECCCC GGIGNVDVGDTVGVTATVPDDDPADGTPSTSTATATAIVEETTGQGQGQGQTQGQIPSQG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC QGQSQGQPPGGAGGLTGRGGLGGGAFPGSPPGQGTAAGGTDPTVQGGAAPVPPLPGMAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH LARQTALVPSATRLEGGRGGTETGTAVATAA HHHHHHCCCCHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure SHVGPDDPPESSPSSGPVPSPAGGNPQPLSTSGPPQASTWPAPQAGGEPAPHATGSHAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGASQAPGWTGSPAWSGPPPPGPGSAPGEVSSRAAASPGAPVPGVSPPPRVASGALPRW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC SLGRTAVAGAIALALAVGAAAAVNASSLGSDGAGGGPGGLRGGPFQVMNPAGSAVTAGGT CCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCC GTGSLHGEYVTADRSGGYTTVRTQSGEVTTVQPTAVTVRSTDGFTATYTVTDETLVDGRT CCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCEEEEECCCCEEEEEEECCCEEECCCC GGIGNVDVGDTVGVTATVPDDDPADGTPSTSTATATAIVEETTGQGQGQGQTQGQIPSQG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC QGQSQGQPPGGAGGLTGRGGLGGGAFPGSPPGQGTAAGGTDPTVQGGAAPVPPLPGMAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH LARQTALVPSATRLEGGRGGTETGTAVATAA HHHHHHCCCCHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA