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The map label for this gene is nreC [H]

Identifier: 158318229

GI number: 158318229

Start: 7895404

End: 7896111

Strand: Reverse

Name: nreC [H]

Synonym: Franean1_6494

Alternate gene names: 158318229

Gene position: 7896111-7895404 (Counterclockwise)

Preceding gene: 158318230

Following gene: 158318228

Centisome position: 87.91

GC content: 71.61

Gene sequence:

>708_bases
ATGGCCGTTCGTGTAGTCCTCGCTGAGGACAACGCCCTGCTTCGGCATGGTCTGGCAACGCTGATCGAGCGTGCGGACGG
CCTGGAGCTCGTCGGCACGGCGACCGATCAGCCGTCCCTGGAACAGGCGGTGCGCGACCACGATCCGGACGTGGTGGTGA
CCGACATCAGGATGCCGCCGTCCCGTTCGGACGAGGGCATCAAGGTCGCCGGGTGGCTGCGGCGGGAGCGCCCGGCGGTC
GGCGTCGTCGTCCTCAGCCAGCACGCCGAGGCCACCTACGCCCTCGCGTTGCTCGAGGGCGGCTCGTCCGGGCGGGCGTA
CCTGCTCAAGGAGCGGGTGGCCGGCGTGGACGACCTGCTGCGGGCCATCCGCGCGGTCGCGGCCGGAGAGTCGGTGATCG
ACCCGGCGGTGGTGGAGGGGCTGGTCGCGGCGAACGCGCGCCGCCAGCACACCGAGCTGGACCGGCTGACCCCGCGCGAG
CGGGAGGTGCTGAGCCACATGGCCCAGGGCTGGAGCAACGCGGCGATCGCCGGGACGCTGGTCCTGTCCGAACGGGCGGT
GGAGAAGCACAGCAACTCGATCTTCGCGAAGCTCGGCCTGACCGACGAGCCCGACCTGAACCGGCGGGTGAAGGCCGTCC
TGCTCTACCTGCACTCGGGGCATCGCCCCGCAAGCGGGTCGACGGGGAAGGTAGCCACACCGACCTGA

Upstream 100 bases:

>100_bases
GAACCCCTGCCCCGGGCCTGTCCCGGCAGGTGTCGTCGGGACGACGTCATCGTGTCCGTGTGGCCCGCTACGGGTGTCAA
GCCGCGCCTACAGTGGACCA

Downstream 100 bases:

>100_bases
TGACATGGTCGCACCCTTGGGCACCGTGAGCCGCACGGCGAGACTGTGTCCATGAGCTCCCCTCCGGCGGTCTCCGTGCT
GGTCGTTGACGACCAGCGGC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAVRVVLAEDNALLRHGLATLIERADGLELVGTATDQPSLEQAVRDHDPDVVVTDIRMPPSRSDEGIKVAGWLRRERPAV
GVVVLSQHAEATYALALLEGGSSGRAYLLKERVAGVDDLLRAIRAVAAGESVIDPAVVEGLVAANARRQHTELDRLTPRE
REVLSHMAQGWSNAAIAGTLVLSERAVEKHSNSIFAKLGLTDEPDLNRRVKAVLLYLHSGHRPASGSTGKVATPT

Sequences:

>Translated_235_residues
MAVRVVLAEDNALLRHGLATLIERADGLELVGTATDQPSLEQAVRDHDPDVVVTDIRMPPSRSDEGIKVAGWLRRERPAV
GVVVLSQHAEATYALALLEGGSSGRAYLLKERVAGVDDLLRAIRAVAAGESVIDPAVVEGLVAANARRQHTELDRLTPRE
REVLSHMAQGWSNAAIAGTLVLSERAVEKHSNSIFAKLGLTDEPDLNRRVKAVLLYLHSGHRPASGSTGKVATPT
>Mature_234_residues
AVRVVLAEDNALLRHGLATLIERADGLELVGTATDQPSLEQAVRDHDPDVVVTDIRMPPSRSDEGIKVAGWLRRERPAVG
VVVLSQHAEATYALALLEGGSSGRAYLLKERVAGVDDLLRAIRAVAAGESVIDPAVVEGLVAANARRQHTELDRLTPRER
EVLSHMAQGWSNAAIAGTLVLSERAVEKHSNSIFAKLGLTDEPDLNRRVKAVLLYLHSGHRPASGSTGKVATPT

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=218, Percent_Identity=31.1926605504587, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788546, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788222, Length=206, Percent_Identity=24.7572815533981, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787473, Length=189, Percent_Identity=33.8624338624339, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25184; Mature: 25053

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRVVLAEDNALLRHGLATLIERADGLELVGTATDQPSLEQAVRDHDPDVVVTDIRMPP
CEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCC
SRSDEGIKVAGWLRRERPAVGVVVLSQHAEATYALALLEGGSSGRAYLLKERVAGVDDLL
CCCCCCEEEEHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEHHHHHCCHHHHH
RAIRAVAAGESVIDPAVVEGLVAANARRQHTELDRLTPREREVLSHMAQGWSNAAIAGTL
HHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHH
VLSERAVEKHSNSIFAKLGLTDEPDLNRRVKAVLLYLHSGHRPASGSTGKVATPT
HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVRVVLAEDNALLRHGLATLIERADGLELVGTATDQPSLEQAVRDHDPDVVVTDIRMPP
EEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCC
SRSDEGIKVAGWLRRERPAVGVVVLSQHAEATYALALLEGGSSGRAYLLKERVAGVDDLL
CCCCCCEEEEHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEHHHHHCCHHHHH
RAIRAVAAGESVIDPAVVEGLVAANARRQHTELDRLTPREREVLSHMAQGWSNAAIAGTL
HHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHH
VLSERAVEKHSNSIFAKLGLTDEPDLNRRVKAVLLYLHSGHRPASGSTGKVATPT
HHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]