| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318211
Identifier: 158318211
GI number: 158318211
Start: 7873260
End: 7874450
Strand: Reverse
Name: 158318211
Synonym: Franean1_6476
Alternate gene names: NA
Gene position: 7874450-7873260 (Counterclockwise)
Preceding gene: 158318213
Following gene: 158318210
Centisome position: 87.67
GC content: 76.66
Gene sequence:
>1191_bases GTGGCCCCGCCGGTGGTCGCGTGGATCGAGCGCGACACCGCCACCGACCGCGACACCGACCGCGACACCGACACCGACAC CGGGATGGCCACGGTTCTGGTCGAGAGCCGGATCAGGGGGACCGTCGTCGGGCTGGACCCGGCCGGCGCGGTGGTGCTGT CGGTCGGCGACCCGACCGCGGTGATCTCCCCGCGGTCCACGGTGAAGCCGATGCAGGCCGTCGGGATGCTGCTCGCCGGG CTCGACGCGGCGTTCGGCTCCGGTGCAGGCGCCGCTTCCCGTGCTGCCGCCGTTTCCGGTGCGGGCGATCCCGCTTCCGG CGTCGGAGATTCCGACTCCGGCCATCCCGACTGCGGGGCCGCCTCCGAACGGGGCGGCGGAATCCCGTCCGAGCTGCTGG CGATCGTGTCCTCCTCGCACAGCGGTGAGCCCGAGCAGCTGGCGGCCGTGCGGGCCGTGCTCGCGGCGGCCGGGCGCGGC GAGGACGCCCTGGCCTGCCCCGCCGACCTCCCCATCGGGCGGCTCGCCCACGAGCGGCACCTGGCCGCCGGCGGCGGGCC CGAACGGCTGTTGATGAACTGCTCCGGCAAGCACGCCGGGATGATCGCCACCTGCGTCGCGGCCGGGTGGCCGGTGGCCG GCTACACCGACCCGGCGCATCCGCTGCAGCGCCGGATCCGGGCCGTGATCGAGGAGCTCACCGGTGCCACGATCACGTCC ACCGCGGTGGACGGCTGCGGTGCCCCGCTGTTCGGCATCCCGCTGCTCGGCCTCGCCCACGGGATGCGCGAGATCGCCCT CGCCGCCGCCGGCCCGCGCTCGCCTCGGCAGCGCGTCGCGGCGGCGATGCGGGCCTTCCCGGCCCTCATCGGCGGTCCGG GGCGACCGGACACGGAGCTGATGCTCGCCGCCCCGTGGATCATCGCGAAGGACGGCGCCGAGGGGGTCACCGTCGCGGCG ACGGCGGCGGGGTACGCGGTGGCGGTCAAGATCGAGGACGGCTCCCAGCGTGCGGCTATGCCAGTCCTGGTCACCGCGCT GCGCCGCATCGGCGCGCTCGACCCCACCCCGGGCCCGGGCGCCGCCGTGGGCCTGGATGCCGGCAGGCTCGACGCCCTGG CCGCTCCCGCGGTGCTCGGTGGCGGGGTGCCGGTCGGTCGGCTGCGCCCGTTCCTGCCGTCCGCCCCCTGA
Upstream 100 bases:
>100_bases TGCGGGTCCCGGGCGGCGGCGGGGAGCGCGCATACCCTGATGTGCATGACGGATTCGCGATCATGAACGATTCCGGATCA TGAGCGAGTCCGGGGGAGGC
Downstream 100 bases:
>100_bases GGCGTTCGGCGGTCCGGCTTGCCGGCCCCGGTCCCGTCGGGGCCCGGCCGTGGTGGTTCAGTGAACGCCGGTGAGCGCGG GCCGGTGAGCGGGTTCCGGG
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase Rmolabile Subfamily; L-Asparaginase II Protein; L-Asparaginase Rmolabile Family; Fumarate Lyase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAPPVVAWIERDTATDRDTDRDTDTDTGMATVLVESRIRGTVVGLDPAGAVVLSVGDPTAVISPRSTVKPMQAVGMLLAG LDAAFGSGAGAASRAAAVSGAGDPASGVGDSDSGHPDCGAASERGGGIPSELLAIVSSSHSGEPEQLAAVRAVLAAAGRG EDALACPADLPIGRLAHERHLAAGGGPERLLMNCSGKHAGMIATCVAAGWPVAGYTDPAHPLQRRIRAVIEELTGATITS TAVDGCGAPLFGIPLLGLAHGMREIALAAAGPRSPRQRVAAAMRAFPALIGGPGRPDTELMLAAPWIIAKDGAEGVTVAA TAAGYAVAVKIEDGSQRAAMPVLVTALRRIGALDPTPGPGAAVGLDAGRLDALAAPAVLGGGVPVGRLRPFLPSAP
Sequences:
>Translated_396_residues MAPPVVAWIERDTATDRDTDRDTDTDTGMATVLVESRIRGTVVGLDPAGAVVLSVGDPTAVISPRSTVKPMQAVGMLLAG LDAAFGSGAGAASRAAAVSGAGDPASGVGDSDSGHPDCGAASERGGGIPSELLAIVSSSHSGEPEQLAAVRAVLAAAGRG EDALACPADLPIGRLAHERHLAAGGGPERLLMNCSGKHAGMIATCVAAGWPVAGYTDPAHPLQRRIRAVIEELTGATITS TAVDGCGAPLFGIPLLGLAHGMREIALAAAGPRSPRQRVAAAMRAFPALIGGPGRPDTELMLAAPWIIAKDGAEGVTVAA TAAGYAVAVKIEDGSQRAAMPVLVTALRRIGALDPTPGPGAAVGLDAGRLDALAAPAVLGGGVPVGRLRPFLPSAP >Mature_395_residues APPVVAWIERDTATDRDTDRDTDTDTGMATVLVESRIRGTVVGLDPAGAVVLSVGDPTAVISPRSTVKPMQAVGMLLAGL DAAFGSGAGAASRAAAVSGAGDPASGVGDSDSGHPDCGAASERGGGIPSELLAIVSSSHSGEPEQLAAVRAVLAAAGRGE DALACPADLPIGRLAHERHLAAGGGPERLLMNCSGKHAGMIATCVAAGWPVAGYTDPAHPLQRRIRAVIEELTGATITST AVDGCGAPLFGIPLLGLAHGMREIALAAAGPRSPRQRVAAAMRAFPALIGGPGRPDTELMLAAPWIIAKDGAEGVTVAAT AAGYAVAVKIEDGSQRAAMPVLVTALRRIGALDPTPGPGAAVGLDAGRLDALAAPAVLGGGVPVGRLRPFLPSAP
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39258; Mature: 39127
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPVVAWIERDTATDRDTDRDTDTDTGMATVLVESRIRGTVVGLDPAGAVVLSVGDPTA CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHEEHHCCCEEEEEECCCCEEEEECCCCCE VISPRSTVKPMQAVGMLLAGLDAAFGSGAGAASRAAAVSGAGDPASGVGDSDSGHPDCGA EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC ASERGGGIPSELLAIVSSSHSGEPEQLAAVRAVLAAAGRGEDALACPADLPIGRLAHERH CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHH LAAGGGPERLLMNCSGKHAGMIATCVAAGWPVAGYTDPAHPLQRRIRAVIEELTGATITS HCCCCCHHHEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEH TAVDGCGAPLFGIPLLGLAHGMREIALAAAGPRSPRQRVAAAMRAFPALIGGPGRPDTEL HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE MLAAPWIIAKDGAEGVTVAATAAGYAVAVKIEDGSQRAAMPVLVTALRRIGALDPTPGPG EEECCEEEECCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC AAVGLDAGRLDALAAPAVLGGGVPVGRLRPFLPSAP CEEECCCCHHHHHHCCHHHCCCCCHHHHCCCCCCCC >Mature Secondary Structure APPVVAWIERDTATDRDTDRDTDTDTGMATVLVESRIRGTVVGLDPAGAVVLSVGDPTA CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHEEHHCCCEEEEEECCCCEEEEECCCCCE VISPRSTVKPMQAVGMLLAGLDAAFGSGAGAASRAAAVSGAGDPASGVGDSDSGHPDCGA EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC ASERGGGIPSELLAIVSSSHSGEPEQLAAVRAVLAAAGRGEDALACPADLPIGRLAHERH CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHH LAAGGGPERLLMNCSGKHAGMIATCVAAGWPVAGYTDPAHPLQRRIRAVIEELTGATITS HCCCCCHHHEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEH TAVDGCGAPLFGIPLLGLAHGMREIALAAAGPRSPRQRVAAAMRAFPALIGGPGRPDTEL HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE MLAAPWIIAKDGAEGVTVAATAAGYAVAVKIEDGSQRAAMPVLVTALRRIGALDPTPGPG EEECCEEEECCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC AAVGLDAGRLDALAAPAVLGGGVPVGRLRPFLPSAP CEEECCCCHHHHHHCCHHHCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA