| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318186
Identifier: 158318186
GI number: 158318186
Start: 7844589
End: 7845725
Strand: Direct
Name: 158318186
Synonym: Franean1_6451
Alternate gene names: NA
Gene position: 7844589-7845725 (Clockwise)
Preceding gene: 158318185
Following gene: 158318187
Centisome position: 87.34
GC content: 67.99
Gene sequence:
>1137_bases ATGCTTTATCCCACTCCGACCCTCGGGCCCGCCGACGATCAGGTGCTCGGCGAGATCGACGGCCTGCGGGATGCGCTGCG GCACCAGATCCAGACCACATCGCCGAAATGGACTGACGGGCTCCGGAAGTTCCTGACCGCCGATGCCGTCGCGGCCTCGA ACTCCATCGAGGGTTTCAAGGTGTCCACGATCGACGTCCAGGATCTGATGACCGGCGAGCGGGATGTCGAAGTCTCGGAC GAGAACCGCGAGGAGACTCTCGCCTATCAGCGGATGATGACGTATATCCAGACGCTCCACGACGCCGAGGACTTCAGCTA CAGCAAAGGGCTGCTCAACGCGCTGCACTGGATGCTGCAGGGTCACCGGCACACCGTGCGCAAGCCGGCCGGGCAGTGGC GCCGGGGCCCGGTCTACGTCACCGATGCCCGCGACCCCAGCATCGCGGCCTATACAGCCCCGGGCGCCGAGGGCGTCCCC GCGCTGATGAACGAGCTCATCGGCTGGCTCAACGCCGCCGACGGCGCCCATCCACTGGTACGGGCAGCAATGGCTCACCT GCACCTGGTGTCCATCCACCCCTGGGCTGACGGGAACGGCCGGATGTCCCGTTCGCTGCAGACGCTCATGATCGCCCGCG AAGGTGTCCTGGCCCCGGAGTTCTCGTCCGTCGAGGCGTGGCTCGGCCGGCCCGGTAACACCTGGGAGTACTACCGCGAG CTCAGCGACCGGGGCGCGACGTACCTTCCCGACCAGGACGTCTCCAGCTGGATCCGGTTCAATCTGACCGCCTACCACCA GCAGGCCCAGACCGTTCAGGGCCGGCTCGACCGCTCCGGGCGGGTATGGGGGGCGCTCGCGGAATTCACCGAGAGCACCG GTCTGGACGAGCGTGTGGTGAGCGCCCTGCACGATGTGGCCATGGCCGGGCGGGTCCGCCGCTCACGCTACGAGCAGGCC GAGAGCCTGAGCCTGCAGCAGGCGCAACGCGACCTGCGCGACCTCACGACCGCCCAGCTCCTGGAACCGGTCGGCCGAAC CCGGGCCCGCTACTACACGGCCGGCACCCGCTTCCCTCAGCCGGCACTCGACCTCGCACGCAAACCCATGACGCTGCGTA ATCCCTACTCCGGCTGA
Upstream 100 bases:
>100_bases CACGCTGCCCCGCGCCGTCTGACAGCTGAGCGGCAGGCCACGCCACGCGGGTTACCCCGACTCGCTCGACGTGATGACTG TATCAATCTATCGTTGATGC
Downstream 100 bases:
>100_bases GCCTTGCCGCGCACCGTGGCCCCTACCGCCGTCGGACGGATTGCGGGTACGTTTACGTACCCGTATCCGTTCGGGAGACG TGAGTGGGAGAGGGGTCCGG
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; AsnC Family Regulatory Protein; Cell Filamentation Protein; Filamentation Induced By CAMP Protein Family Protein; Fic Family Protein; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MLYPTPTLGPADDQVLGEIDGLRDALRHQIQTTSPKWTDGLRKFLTADAVAASNSIEGFKVSTIDVQDLMTGERDVEVSD ENREETLAYQRMMTYIQTLHDAEDFSYSKGLLNALHWMLQGHRHTVRKPAGQWRRGPVYVTDARDPSIAAYTAPGAEGVP ALMNELIGWLNAADGAHPLVRAAMAHLHLVSIHPWADGNGRMSRSLQTLMIAREGVLAPEFSSVEAWLGRPGNTWEYYRE LSDRGATYLPDQDVSSWIRFNLTAYHQQAQTVQGRLDRSGRVWGALAEFTESTGLDERVVSALHDVAMAGRVRRSRYEQA ESLSLQQAQRDLRDLTTAQLLEPVGRTRARYYTAGTRFPQPALDLARKPMTLRNPYSG
Sequences:
>Translated_378_residues MLYPTPTLGPADDQVLGEIDGLRDALRHQIQTTSPKWTDGLRKFLTADAVAASNSIEGFKVSTIDVQDLMTGERDVEVSD ENREETLAYQRMMTYIQTLHDAEDFSYSKGLLNALHWMLQGHRHTVRKPAGQWRRGPVYVTDARDPSIAAYTAPGAEGVP ALMNELIGWLNAADGAHPLVRAAMAHLHLVSIHPWADGNGRMSRSLQTLMIAREGVLAPEFSSVEAWLGRPGNTWEYYRE LSDRGATYLPDQDVSSWIRFNLTAYHQQAQTVQGRLDRSGRVWGALAEFTESTGLDERVVSALHDVAMAGRVRRSRYEQA ESLSLQQAQRDLRDLTTAQLLEPVGRTRARYYTAGTRFPQPALDLARKPMTLRNPYSG >Mature_378_residues MLYPTPTLGPADDQVLGEIDGLRDALRHQIQTTSPKWTDGLRKFLTADAVAASNSIEGFKVSTIDVQDLMTGERDVEVSD ENREETLAYQRMMTYIQTLHDAEDFSYSKGLLNALHWMLQGHRHTVRKPAGQWRRGPVYVTDARDPSIAAYTAPGAEGVP ALMNELIGWLNAADGAHPLVRAAMAHLHLVSIHPWADGNGRMSRSLQTLMIAREGVLAPEFSSVEAWLGRPGNTWEYYRE LSDRGATYLPDQDVSSWIRFNLTAYHQQAQTVQGRLDRSGRVWGALAEFTESTGLDERVVSALHDVAMAGRVRRSRYEQA ESLSLQQAQRDLRDLTTAQLLEPVGRTRARYYTAGTRFPQPALDLARKPMTLRNPYSG
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42303; Mature: 42303
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPTPTLGPADDQVLGEIDGLRDALRHQIQTTSPKWTDGLRKFLTADAVAASNSIEGFK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEE VSTIDVQDLMTGERDVEVSDENREETLAYQRMMTYIQTLHDAEDFSYSKGLLNALHWMLQ EEEEEHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHRHTVRKPAGQWRRGPVYVTDARDPSIAAYTAPGAEGVPALMNELIGWLNAADGAHPLV CCHHHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH RAAMAHLHLVSIHPWADGNGRMSRSLQTLMIAREGVLAPEFSSVEAWLGRPGNTWEYYRE HHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH LSDRGATYLPDQDVSSWIRFNLTAYHQQAQTVQGRLDRSGRVWGALAEFTESTGLDERVV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH SALHDVAMAGRVRRSRYEQAESLSLQQAQRDLRDLTTAQLLEPVGRTRARYYTAGTRFPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC PALDLARKPMTLRNPYSG HHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLYPTPTLGPADDQVLGEIDGLRDALRHQIQTTSPKWTDGLRKFLTADAVAASNSIEGFK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEE VSTIDVQDLMTGERDVEVSDENREETLAYQRMMTYIQTLHDAEDFSYSKGLLNALHWMLQ EEEEEHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHRHTVRKPAGQWRRGPVYVTDARDPSIAAYTAPGAEGVPALMNELIGWLNAADGAHPLV CCHHHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH RAAMAHLHLVSIHPWADGNGRMSRSLQTLMIAREGVLAPEFSSVEAWLGRPGNTWEYYRE HHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH LSDRGATYLPDQDVSSWIRFNLTAYHQQAQTVQGRLDRSGRVWGALAEFTESTGLDERVV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH SALHDVAMAGRVRRSRYEQAESLSLQQAQRDLRDLTTAQLLEPVGRTRARYYTAGTRFPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC PALDLARKPMTLRNPYSG HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA