| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318185
Identifier: 158318185
GI number: 158318185
Start: 7843638
End: 7844510
Strand: Direct
Name: 158318185
Synonym: Franean1_6450
Alternate gene names: NA
Gene position: 7843638-7844510 (Clockwise)
Preceding gene: 158318184
Following gene: 158318186
Centisome position: 87.33
GC content: 69.99
Gene sequence:
>873_bases ATGCCTGTTGACGTCGAGTCCGCCGAACGGTTCATGCTGGCCAACGCCCGCCTGCTGGATCGTCACCTGCTGGCCGTGCT GCTGCACGACGCTCCCGTGACGCCCGTCCTCGACGCGTTGCGTGCCTACCGAAACCCTGATGGCGGCTTCGGTCACGCGC TCGAGCCCGACGTCCGCGCCCCCGGCAGCGAACCGACCGCCACGCTGCACGCGCTGGAGGTGCTCACCGCGCTCGGTGAG CTCGACCATCCGATGGTCGCCGAAGCCGCCGTCTGGATCGCGACCATCGCGGATCCAGATGGTGGCGTTCCGTTCGTCCT GCCCGCCGCCGCGGCGTATCCGCACGCGCCCTGGATGGTGCCCACCGAGGGCGGGTCGCAGCTCACGTTCGGGATCGCGG GTGCGCTGTGGCAGGCGGGTTCCCACGAACCCTGGCTGCGGCACGCGACCGAGTGGTGCTGGGCGACGTTGAAGAGCCCG GACGAGCTGAGCGGCTACCTGCTGAAGTTCGCCCTCGGCTTCCTCGACCAGGTTCCCGAGCCGGCCCGCGCCGCCGCGGT GATCGAGGATCTGCGCCCCCGGATCGAGCCTGACGGCTCCATCTCTGTTCCCGGCGGAACCGAGAACGAGCGGATCACCC CTCTCGCCCTGTCACCGAAGCCAGGCAGGCGCAGCCGTGCTCTCTTCACGGACGACCAGATCCAGGCTGATCTCGACCTC CTGGAAAAGGGACAGCGCGACGACGGCGGCTGGACGTTCGACTGGCTCGGCTGGTCACCGGGACAGTCCGTCGAGTGGCG CGGTCTCGTCACGCTGCAAGCGCTGGAGACGCTCACCGCGCACGGCCGGATCACGCTGCCCCGCGCCGTCTGA
Upstream 100 bases:
>100_bases AGCCAGGCGCACATGAACGACGAGGTGCGTCGGCTGACCGGCAGCACACCGGTCCGATTTCTGAAAGACGCCGCGCTGAG CGCTGCCTAGCGTGGCGGCC
Downstream 100 bases:
>100_bases CAGCTGAGCGGCAGGCCACGCCACGCGGGTTACCCCGACTCGCTCGACGTGATGACTGTATCAATCTATCGTTGATGCAT GCTTTATCCCACTCCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPVDVESAERFMLANARLLDRHLLAVLLHDAPVTPVLDALRAYRNPDGGFGHALEPDVRAPGSEPTATLHALEVLTALGE LDHPMVAEAAVWIATIADPDGGVPFVLPAAAAYPHAPWMVPTEGGSQLTFGIAGALWQAGSHEPWLRHATEWCWATLKSP DELSGYLLKFALGFLDQVPEPARAAAVIEDLRPRIEPDGSISVPGGTENERITPLALSPKPGRRSRALFTDDQIQADLDL LEKGQRDDGGWTFDWLGWSPGQSVEWRGLVTLQALETLTAHGRITLPRAV
Sequences:
>Translated_290_residues MPVDVESAERFMLANARLLDRHLLAVLLHDAPVTPVLDALRAYRNPDGGFGHALEPDVRAPGSEPTATLHALEVLTALGE LDHPMVAEAAVWIATIADPDGGVPFVLPAAAAYPHAPWMVPTEGGSQLTFGIAGALWQAGSHEPWLRHATEWCWATLKSP DELSGYLLKFALGFLDQVPEPARAAAVIEDLRPRIEPDGSISVPGGTENERITPLALSPKPGRRSRALFTDDQIQADLDL LEKGQRDDGGWTFDWLGWSPGQSVEWRGLVTLQALETLTAHGRITLPRAV >Mature_289_residues PVDVESAERFMLANARLLDRHLLAVLLHDAPVTPVLDALRAYRNPDGGFGHALEPDVRAPGSEPTATLHALEVLTALGEL DHPMVAEAAVWIATIADPDGGVPFVLPAAAAYPHAPWMVPTEGGSQLTFGIAGALWQAGSHEPWLRHATEWCWATLKSPD ELSGYLLKFALGFLDQVPEPARAAAVIEDLRPRIEPDGSISVPGGTENERITPLALSPKPGRRSRALFTDDQIQADLDLL EKGQRDDGGWTFDWLGWSPGQSVEWRGLVTLQALETLTAHGRITLPRAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31375; Mature: 31244
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDVESAERFMLANARLLDRHLLAVLLHDAPVTPVLDALRAYRNPDGGFGHALEPDVRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC PGSEPTATLHALEVLTALGELDHPMVAEAAVWIATIADPDGGVPFVLPAAAAYPHAPWMV CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCCEEECCHHCCCCCCEEE PTEGGSQLTFGIAGALWQAGSHEPWLRHATEWCWATLKSPDELSGYLLKFALGFLDQVPE ECCCCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PARAAAVIEDLRPRIEPDGSISVPGGTENERITPLALSPKPGRRSRALFTDDQIQADLDL HHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHH LEKGQRDDGGWTFDWLGWSPGQSVEWRGLVTLQALETLTAHGRITLPRAV HHCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCEEECCCCC >Mature Secondary Structure PVDVESAERFMLANARLLDRHLLAVLLHDAPVTPVLDALRAYRNPDGGFGHALEPDVRA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC PGSEPTATLHALEVLTALGELDHPMVAEAAVWIATIADPDGGVPFVLPAAAAYPHAPWMV CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCCCEEECCHHCCCCCCEEE PTEGGSQLTFGIAGALWQAGSHEPWLRHATEWCWATLKSPDELSGYLLKFALGFLDQVPE ECCCCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PARAAAVIEDLRPRIEPDGSISVPGGTENERITPLALSPKPGRRSRALFTDDQIQADLDL HHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHH LEKGQRDDGGWTFDWLGWSPGQSVEWRGLVTLQALETLTAHGRITLPRAV HHCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA