Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is sphX [H]

Identifier: 158318158

GI number: 158318158

Start: 7801163

End: 7803577

Strand: Direct

Name: sphX [H]

Synonym: Franean1_6423

Alternate gene names: 158318158

Gene position: 7801163-7803577 (Clockwise)

Preceding gene: 158318157

Following gene: 158318159

Centisome position: 86.85

GC content: 73.13

Gene sequence:

>2415_bases
GTGGGGTATCAGCTCGGAATCGATCTGGGTGTATCCGAAACAACCGTCGCGGCCATCGAGGCGGGGTGGCCTGCCGTCGT
TCCGATCGGCGGCTCCGCGTCCGTGCCGACAATTCTGCACATCGGCACGGACGGGACGGCACGCGGCGGCCGGATAGCCG
CCCGGCTGGCCCGGAGGGATCCGGACCGGCACGCGGCGCGTTTCGTCGAACGGTTGGGAGAACCGGCGCCGATCCTCGTC
GGCGGCGTCGGGTACAGCGCGTCCTCGCTGGTCGCGCGCTATCTCTCCTGGCTGGTGGATACCGTCACCCGGATGCGCGG
GGAGGCACCGGAGCTGGTCGTCGTGACCGCCCCCGGCAGCTGGCCGGACCGGCGGCGGGAGGGGCTGGCCGACGCTCTGG
CCCGCGTCGAGGCCGACGTCGCAATCACCGCGCGACCGTCCGCCGACGCGCTCGGCGCGCTGCTGACCCGCTCGGGCCGC
GCGGCCCCCGGGCGCTACGTCGCCACGTTCGACCTGGGCTCGGACTGGTTCGAGGCCGCCATCCACACGGCGATGCCGTC
CGGGTTCGTCGTCGCGGGCGGCCCGGTGGGCCTCTCCGACGTGACCACCGCCATGCTCGACGAGCTGCTGCGGGCGCACG
TCGTCGCGGCGCTCCCCGCCGACGCCCCGGCGGCCGCGCTGTCGGCGTCGGCGCCGCTGCTGGCGGCCTGTGCCGTGGCA
CGCGAGGACCTGGTGGACGACGAGACGGCGACCATCGAGGTCGCCACCGGCGAGGCCGGTGACGGCACCGGCACCGGCGA
AGGCGGCACCGGCGGGAACAGCACCAGCGTCACCGTCAGCAGGGAGGAGTACGAGAACCTCGTCCGGCCGATGATCGAGG
ACGCCGCGCGCGCCCTTGCCCGCGCCATCCGGTCCGTGCCGGCCATGCCCGAAGACGTGTCTCTTCTGGTGCTCCGGGGG
CCGGGGGCCCGGCTCCCGCTCGTCGGCAAGGTGCTCGGCGAGTCACTCGGCGGAATCGGGCGGCACGAGACCCACCCGGA
CTCCGACCTCGCGCTCGGCGCGGCGCTGCTGGCGGCGGCGGCGAACCCGACCGAGCCGGCCAGCTCGCAGACGGTGGTGC
TCGGCCCGGCGGCGTACACGACGACGCCGCCACCGAGCATCCCGCCGGCGAGCAGGCCGCCCGCGGTCGGCTCACCCGCG
GTCAGCTCACCGACGGTCAGCTCACCGGCGGACGTCCCGCCGGGGGCTGTCCTGACCGGCGTCGAGACCCAGGCGGTCGA
TCCGGTCGAGCCGGCCCCGCCGGTCACGACGTGCCGGGCCCGGCACGACTCGGCGCGGAAGATTACCGCCGCCGCGGCCG
CGCTCGCCGTGTTCGTCGCGGGCAGCGTGACCCTCGGCCTGGTGCTCGCCGACGATGACGGCGACTCCGCGGCCATCACG
GCGGCCGACACCGGGCCGCTGCCGCCGTCCACCATCGATCAGCACCCGCAGTTCCCGGCGGACATGATGCGCTCCGCCGA
GAAGGCCGCCGGCATCACCGCCGGGAACGCCGCTCCGGCGACGACAGCTCCCGACGGGCCGGAGACGGTGATCGCGACGG
GGTCGGCCGAGGTCGCGCCGATCACCGGCACCGCCTACGCGATGTTCCGCGAGGCGCAGAAGGGGGTCACCGTCCGGGTC
AGCGCGACCGACACCGACGACGGGTTCGCCAGGCTGTGCGCCGGTGACGCCGACATCGCCGGCGCGTCGTTCGCGCTCAC
CGACCCGGCCTGCAAGGACAAGGTGGTCGGGTTCGAGATCGCGCACCACCTGCTGCCGATCGTGGTGCCGAAGACCAACA
CCTGGGTGAAGTGCCTGACCACCGCGCAGATCGGCGCGATGTGGAAACGGGACTCCACCGTCACGAGCTGGAACCAGATC
GACCCGTCGTTCCCGGCCGAGCCGGTGCGGCTGGTGGGCCCGGCGCCCGGGACCGTGCACGCGAAGGTCTTCCTGGCCAG
CATGACCGGCGCCTCGGACAACACCCGTAAGTACCGCGAGGTCGAGCTGGACGAGGTCCCGGAGGAGGTCGAGTACGACC
GCGGCGCGATCGGGTTTATGGACTACTCGAACTTCCAGACCGCGGGCGGGGACGTCCGCGCGATCCAGCTCGACGCGGGC
CGTGGGTGCGTCGAGCCGAACGCGCTGACGGCGGGCACCGGGATGTACATGCCGCTGTGCAAGCCGCTGTATGTCTACGC
GAGCAAGGAGTCGCTGCGGCGGCCCGCGGTCGCGGCCTTCATGAACTACTACATGGAGAACCAGAAGGACGTGACGTTCC
GGGCGCACTTCGTCGCCCGGGACGACGCCACGGTCAGGGACAACACGGCGATCGTCCATGCCATGACGTCCGGAGTGGAA
CCCGTCCGGACATAG

Upstream 100 bases:

>100_bases
ACGACGTGTTCCGCGTCAATCGCGCCGATGCGCGGCTTCGCCCGCGCATTCCCCTTCGGTACCATCTGCGGGCTGGTGCA
AGGTGCCATGGGGGGAAATC

Downstream 100 bases:

>100_bases
CTGCTCCTTCGGCCCGCGCCGACGGCATGTGCCGCGTCCGGAAGGCGGACGCGGCACACCGCCGGTAACGTCGTCGCTGG
CGGCTACTGGCGGCGATCGG

Product: putative phosphate ABC transporter phosphate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 804; Mature: 803

Protein sequence:

>804_residues
MGYQLGIDLGVSETTVAAIEAGWPAVVPIGGSASVPTILHIGTDGTARGGRIAARLARRDPDRHAARFVERLGEPAPILV
GGVGYSASSLVARYLSWLVDTVTRMRGEAPELVVVTAPGSWPDRRREGLADALARVEADVAITARPSADALGALLTRSGR
AAPGRYVATFDLGSDWFEAAIHTAMPSGFVVAGGPVGLSDVTTAMLDELLRAHVVAALPADAPAAALSASAPLLAACAVA
REDLVDDETATIEVATGEAGDGTGTGEGGTGGNSTSVTVSREEYENLVRPMIEDAARALARAIRSVPAMPEDVSLLVLRG
PGARLPLVGKVLGESLGGIGRHETHPDSDLALGAALLAAAANPTEPASSQTVVLGPAAYTTTPPPSIPPASRPPAVGSPA
VSSPTVSSPADVPPGAVLTGVETQAVDPVEPAPPVTTCRARHDSARKITAAAAALAVFVAGSVTLGLVLADDDGDSAAIT
AADTGPLPPSTIDQHPQFPADMMRSAEKAAGITAGNAAPATTAPDGPETVIATGSAEVAPITGTAYAMFREAQKGVTVRV
SATDTDDGFARLCAGDADIAGASFALTDPACKDKVVGFEIAHHLLPIVVPKTNTWVKCLTTAQIGAMWKRDSTVTSWNQI
DPSFPAEPVRLVGPAPGTVHAKVFLASMTGASDNTRKYREVELDEVPEEVEYDRGAIGFMDYSNFQTAGGDVRAIQLDAG
RGCVEPNALTAGTGMYMPLCKPLYVYASKESLRRPAVAAFMNYYMENQKDVTFRAHFVARDDATVRDNTAIVHAMTSGVE
PVRT

Sequences:

>Translated_804_residues
MGYQLGIDLGVSETTVAAIEAGWPAVVPIGGSASVPTILHIGTDGTARGGRIAARLARRDPDRHAARFVERLGEPAPILV
GGVGYSASSLVARYLSWLVDTVTRMRGEAPELVVVTAPGSWPDRRREGLADALARVEADVAITARPSADALGALLTRSGR
AAPGRYVATFDLGSDWFEAAIHTAMPSGFVVAGGPVGLSDVTTAMLDELLRAHVVAALPADAPAAALSASAPLLAACAVA
REDLVDDETATIEVATGEAGDGTGTGEGGTGGNSTSVTVSREEYENLVRPMIEDAARALARAIRSVPAMPEDVSLLVLRG
PGARLPLVGKVLGESLGGIGRHETHPDSDLALGAALLAAAANPTEPASSQTVVLGPAAYTTTPPPSIPPASRPPAVGSPA
VSSPTVSSPADVPPGAVLTGVETQAVDPVEPAPPVTTCRARHDSARKITAAAAALAVFVAGSVTLGLVLADDDGDSAAIT
AADTGPLPPSTIDQHPQFPADMMRSAEKAAGITAGNAAPATTAPDGPETVIATGSAEVAPITGTAYAMFREAQKGVTVRV
SATDTDDGFARLCAGDADIAGASFALTDPACKDKVVGFEIAHHLLPIVVPKTNTWVKCLTTAQIGAMWKRDSTVTSWNQI
DPSFPAEPVRLVGPAPGTVHAKVFLASMTGASDNTRKYREVELDEVPEEVEYDRGAIGFMDYSNFQTAGGDVRAIQLDAG
RGCVEPNALTAGTGMYMPLCKPLYVYASKESLRRPAVAAFMNYYMENQKDVTFRAHFVARDDATVRDNTAIVHAMTSGVE
PVRT
>Mature_803_residues
GYQLGIDLGVSETTVAAIEAGWPAVVPIGGSASVPTILHIGTDGTARGGRIAARLARRDPDRHAARFVERLGEPAPILVG
GVGYSASSLVARYLSWLVDTVTRMRGEAPELVVVTAPGSWPDRRREGLADALARVEADVAITARPSADALGALLTRSGRA
APGRYVATFDLGSDWFEAAIHTAMPSGFVVAGGPVGLSDVTTAMLDELLRAHVVAALPADAPAAALSASAPLLAACAVAR
EDLVDDETATIEVATGEAGDGTGTGEGGTGGNSTSVTVSREEYENLVRPMIEDAARALARAIRSVPAMPEDVSLLVLRGP
GARLPLVGKVLGESLGGIGRHETHPDSDLALGAALLAAAANPTEPASSQTVVLGPAAYTTTPPPSIPPASRPPAVGSPAV
SSPTVSSPADVPPGAVLTGVETQAVDPVEPAPPVTTCRARHDSARKITAAAAALAVFVAGSVTLGLVLADDDGDSAAITA
ADTGPLPPSTIDQHPQFPADMMRSAEKAAGITAGNAAPATTAPDGPETVIATGSAEVAPITGTAYAMFREAQKGVTVRVS
ATDTDDGFARLCAGDADIAGASFALTDPACKDKVVGFEIAHHLLPIVVPKTNTWVKCLTTAQIGAMWKRDSTVTSWNQID
PSFPAEPVRLVGPAPGTVHAKVFLASMTGASDNTRKYREVELDEVPEEVEYDRGAIGFMDYSNFQTAGGDVRAIQLDAGR
GCVEPNALTAGTGMYMPLCKPLYVYASKESLRRPAVAAFMNYYMENQKDVTFRAHFVARDDATVRDNTAIVHAMTSGVEP
VRT

Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82790; Mature: 82659

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYQLGIDLGVSETTVAAIEAGWPAVVPIGGSASVPTILHIGTDGTARGGRIAARLARRD
CCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHCC
PDRHAARFVERLGEPAPILVGGVGYSASSLVARYLSWLVDTVTRMRGEAPELVVVTAPGS
CHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
WPDRRREGLADALARVEADVAITARPSADALGALLTRSGRAAPGRYVATFDLGSDWFEAA
CHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH
IHTAMPSGFVVAGGPVGLSDVTTAMLDELLRAHVVAALPADAPAAALSASAPLLAACAVA
HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHH
REDLVDDETATIEVATGEAGDGTGTGEGGTGGNSTSVTVSREEYENLVRPMIEDAARALA
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
RAIRSVPAMPEDVSLLVLRGPGARLPLVGKVLGESLGGIGRHETHPDSDLALGAALLAAA
HHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
ANPTEPASSQTVVLGPAAYTTTPPPSIPPASRPPAVGSPAVSSPTVSSPADVPPGAVLTG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
VETQAVDPVEPAPPVTTCRARHDSARKITAAAAALAVFVAGSVTLGLVLADDDGDSAAIT
CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEE
AADTGPLPPSTIDQHPQFPADMMRSAEKAAGITAGNAAPATTAPDGPETVIATGSAEVAP
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
ITGTAYAMFREAQKGVTVRVSATDTDDGFARLCAGDADIAGASFALTDPACKDKVVGFEI
ECCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHCCCCCCCCCEEEECCCCHHCCHHHHHH
AHHLLPIVVPKTNTWVKCLTTAQIGAMWKRDSTVTSWNQIDPSFPAEPVRLVGPAPGTVH
HHHHEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE
AKVFLASMTGASDNTRKYREVELDEVPEEVEYDRGAIGFMDYSNFQTAGGDVRAIQLDAG
EEEEEEEECCCCCCCCHHEECCHHHCCHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECC
RGCVEPNALTAGTGMYMPLCKPLYVYASKESLRRPAVAAFMNYYMENQKDVTFRAHFVAR
CCCCCCCCEECCCCCHHHCCCEEEEEECHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEC
DDATVRDNTAIVHAMTSGVEPVRT
CCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
GYQLGIDLGVSETTVAAIEAGWPAVVPIGGSASVPTILHIGTDGTARGGRIAARLARRD
CEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHCC
PDRHAARFVERLGEPAPILVGGVGYSASSLVARYLSWLVDTVTRMRGEAPELVVVTAPGS
CHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
WPDRRREGLADALARVEADVAITARPSADALGALLTRSGRAAPGRYVATFDLGSDWFEAA
CHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH
IHTAMPSGFVVAGGPVGLSDVTTAMLDELLRAHVVAALPADAPAAALSASAPLLAACAVA
HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHH
REDLVDDETATIEVATGEAGDGTGTGEGGTGGNSTSVTVSREEYENLVRPMIEDAARALA
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
RAIRSVPAMPEDVSLLVLRGPGARLPLVGKVLGESLGGIGRHETHPDSDLALGAALLAAA
HHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC
ANPTEPASSQTVVLGPAAYTTTPPPSIPPASRPPAVGSPAVSSPTVSSPADVPPGAVLTG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
VETQAVDPVEPAPPVTTCRARHDSARKITAAAAALAVFVAGSVTLGLVLADDDGDSAAIT
CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEE
AADTGPLPPSTIDQHPQFPADMMRSAEKAAGITAGNAAPATTAPDGPETVIATGSAEVAP
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
ITGTAYAMFREAQKGVTVRVSATDTDDGFARLCAGDADIAGASFALTDPACKDKVVGFEI
ECCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHCCCCCCCCCEEEECCCCHHCCHHHHHH
AHHLLPIVVPKTNTWVKCLTTAQIGAMWKRDSTVTSWNQIDPSFPAEPVRLVGPAPGTVH
HHHHEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE
AKVFLASMTGASDNTRKYREVELDEVPEEVEYDRGAIGFMDYSNFQTAGGDVRAIQLDAG
EEEEEEEECCCCCCCCHHEECCHHHCCHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECC
RGCVEPNALTAGTGMYMPLCKPLYVYASKESLRRPAVAAFMNYYMENQKDVTFRAHFVAR
CCCCCCCCEECCCCCHHHCCCEEEEEECHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEC
DDATVRDNTAIVHAMTSGVEPVRT
CCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]