| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318153
Identifier: 158318153
GI number: 158318153
Start: 7793713
End: 7795080
Strand: Direct
Name: 158318153
Synonym: Franean1_6418
Alternate gene names: NA
Gene position: 7793713-7795080 (Clockwise)
Preceding gene: 158318152
Following gene: 158318157
Centisome position: 86.77
GC content: 73.61
Gene sequence:
>1368_bases GTGGGAACACATAGCGGGTGGCGTGCCCGCGAGCGGCGCTCACCGGCACGCGAACGGGATCGGCTCAACGTCGGACGTCC AGGCGGACCGGTTCGGGAAGACACACAGTTCGTGACGAGTGATCGTTCCGGACAGGACGAAAACGCCGGCCAGACGGCCA GCATCCACGCATCACGGGCACACGGGTCGTATCATGCGCAGCGACCGGAGTGGGGGGTCGGGGAACCCGCCGGTGCCACC GTCCCCCCGTCCGGCGCATCGAGGTCGCGCCGACGAGCGGACCGGAGAGAGGATCTGCGCAGTGCCGCGAACTCGTCCTT CGGCCAGCCTGCCAGCGCAAGTCCGGGTGGTGTGTGGGTGAGCCTCGCGGGGGCGCGCCCCAAAGGGCCGCGAGCCGATT TGAAGGACGGGCCGCAGCGAATCCTCCTTACCCGTTTAAATGAATTTAACAATCCCTATCGGGTCAGCTATGAGATGGTG GCCCGGGCGCTGTGGTCCGACCCGGGCCCCACGAAGATCCAGCGCTCGCGGACGCGTGACCTGAGCCGCCAGTTCCGCGG CGAGAAGGCCATCGAATGGCGGGTGGTCGAGGTCTACGTCAACCTGCTGTTCACCGAAACCGATCCGGCGCGCGCCGTAC ACCTGGAGAACCTGCGTCAGCTGCACGTCCAGGCGTTCGGCGCGACCGTCGACCCCGACGGCCAGCCCACCCCCGAGCCC GAGCCACCGGCCATCGACCCGGCCTACGTCGCCGAGCTCAAGCGTCAGCTCGAGGAGTCCCGCACCCGCGCCTCGTTCGC GACCGCGCTGCTCGTGATCGTCCAGGCGGAGAACACCGCGCTGCGCGGGCGGGGGGCGTCGTTCGACTGGTTCGGCCCGG CGGCGGCCACCGCCGGCGCCCCAGGCAACGACGGCGCCGCGGCTGACACCGCGGCCGGTGGCAAGGCCGGCGGCGCGAAC GGCACCGCGGTCGGCGGCACGGGCGCGCCTGGCGGCGGAGCCGGTGCGGGCGACGGGCGCGACCGGTCCGCTCGGCGAGC CCGGCCCGGATCGGACGGCGGCGGGGCGCACCCGCTCATCGACCCGGCCACCGCTCCCATCGTGCGCCGGCAGGGCCATC GCGCCGGGCAGCGCCGCCGGCCGGGCTCACCGGCCGGCGCGGGTGACGCGCCGGGGCCCGGGGGAAAGACCCCCGTGTAC CTCTCCGGGGCGGCGCAGGCCCCGCCGTCGACGCTGACGGCCCTCGCCCGCAACCGGTCGGTCACGGCGGCGCTGTACCG CCTCCCGGCGCCCGAGCAGGCCTCCGACGACCTCGGGCTCGACATCCTCGTGGGGCGGGAGAAACGCCGCCGCGGAAGGC CACGCTGA
Upstream 100 bases:
>100_bases GGTTGTGCGGCCTTGCCGCGCATCCGGGTGCCGGGTTTCCTGATGATGCAACGTTTCGCGGCATTACGCCGATGTTCATC CGGTAAAGGGGGAAACAGGT
Downstream 100 bases:
>100_bases GGGCACGGGGAGCACCTCATCGGCGGAACAGCATCACGGAACAGCGCTGCGGAACGGCGTCAAAGCAGTGACAGGCCGGC GGCCTGCTGCTCGAAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MGTHSGWRARERRSPARERDRLNVGRPGGPVREDTQFVTSDRSGQDENAGQTASIHASRAHGSYHAQRPEWGVGEPAGAT VPPSGASRSRRRADRREDLRSAANSSFGQPASASPGGVWVSLAGARPKGPRADLKDGPQRILLTRLNEFNNPYRVSYEMV ARALWSDPGPTKIQRSRTRDLSRQFRGEKAIEWRVVEVYVNLLFTETDPARAVHLENLRQLHVQAFGATVDPDGQPTPEP EPPAIDPAYVAELKRQLEESRTRASFATALLVIVQAENTALRGRGASFDWFGPAAATAGAPGNDGAAADTAAGGKAGGAN GTAVGGTGAPGGGAGAGDGRDRSARRARPGSDGGGAHPLIDPATAPIVRRQGHRAGQRRRPGSPAGAGDAPGPGGKTPVY LSGAAQAPPSTLTALARNRSVTAALYRLPAPEQASDDLGLDILVGREKRRRGRPR
Sequences:
>Translated_455_residues MGTHSGWRARERRSPARERDRLNVGRPGGPVREDTQFVTSDRSGQDENAGQTASIHASRAHGSYHAQRPEWGVGEPAGAT VPPSGASRSRRRADRREDLRSAANSSFGQPASASPGGVWVSLAGARPKGPRADLKDGPQRILLTRLNEFNNPYRVSYEMV ARALWSDPGPTKIQRSRTRDLSRQFRGEKAIEWRVVEVYVNLLFTETDPARAVHLENLRQLHVQAFGATVDPDGQPTPEP EPPAIDPAYVAELKRQLEESRTRASFATALLVIVQAENTALRGRGASFDWFGPAAATAGAPGNDGAAADTAAGGKAGGAN GTAVGGTGAPGGGAGAGDGRDRSARRARPGSDGGGAHPLIDPATAPIVRRQGHRAGQRRRPGSPAGAGDAPGPGGKTPVY LSGAAQAPPSTLTALARNRSVTAALYRLPAPEQASDDLGLDILVGREKRRRGRPR >Mature_454_residues GTHSGWRARERRSPARERDRLNVGRPGGPVREDTQFVTSDRSGQDENAGQTASIHASRAHGSYHAQRPEWGVGEPAGATV PPSGASRSRRRADRREDLRSAANSSFGQPASASPGGVWVSLAGARPKGPRADLKDGPQRILLTRLNEFNNPYRVSYEMVA RALWSDPGPTKIQRSRTRDLSRQFRGEKAIEWRVVEVYVNLLFTETDPARAVHLENLRQLHVQAFGATVDPDGQPTPEPE PPAIDPAYVAELKRQLEESRTRASFATALLVIVQAENTALRGRGASFDWFGPAAATAGAPGNDGAAADTAAGGKAGGANG TAVGGTGAPGGGAGAGDGRDRSARRARPGSDGGGAHPLIDPATAPIVRRQGHRAGQRRRPGSPAGAGDAPGPGGKTPVYL SGAAQAPPSTLTALARNRSVTAALYRLPAPEQASDDLGLDILVGREKRRRGRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47944; Mature: 47812
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTHSGWRARERRSPARERDRLNVGRPGGPVREDTQFVTSDRSGQDENAGQTASIHASRA CCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEHHC HGSYHAQRPEWGVGEPAGATVPPSGASRSRRRADRREDLRSAANSSFGQPASASPGGVWV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE SLAGARPKGPRADLKDGPQRILLTRLNEFNNPYRVSYEMVARALWSDPGPTKIQRSRTRD EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHH LSRQFRGEKAIEWRVVEVYVNLLFTETDPARAVHLENLRQLHVQAFGATVDPDGQPTPEP HHHHHCCCCCHHHEEHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCC EPPAIDPAYVAELKRQLEESRTRASFATALLVIVQAENTALRGRGASFDWFGPAAATAGA CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEECCCCCCCCCCCCHHHCCCC PGNDGAAADTAAGGKAGGANGTAVGGTGAPGGGAGAGDGRDRSARRARPGSDGGGAHPLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC DPATAPIVRRQGHRAGQRRRPGSPAGAGDAPGPGGKTPVYLSGAAQAPPSTLTALARNRS CCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC VTAALYRLPAPEQASDDLGLDILVGREKRRRGRPR CEEHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCC >Mature Secondary Structure GTHSGWRARERRSPARERDRLNVGRPGGPVREDTQFVTSDRSGQDENAGQTASIHASRA CCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEHHC HGSYHAQRPEWGVGEPAGATVPPSGASRSRRRADRREDLRSAANSSFGQPASASPGGVWV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE SLAGARPKGPRADLKDGPQRILLTRLNEFNNPYRVSYEMVARALWSDPGPTKIQRSRTRD EECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHH LSRQFRGEKAIEWRVVEVYVNLLFTETDPARAVHLENLRQLHVQAFGATVDPDGQPTPEP HHHHHCCCCCHHHEEHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCC EPPAIDPAYVAELKRQLEESRTRASFATALLVIVQAENTALRGRGASFDWFGPAAATAGA CCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEECCCCCCCCCCCCHHHCCCC PGNDGAAADTAAGGKAGGANGTAVGGTGAPGGGAGAGDGRDRSARRARPGSDGGGAHPLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC DPATAPIVRRQGHRAGQRRRPGSPAGAGDAPGPGGKTPVYLSGAAQAPPSTLTALARNRS CCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC VTAALYRLPAPEQASDDLGLDILVGREKRRRGRPR CEEHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA