| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318152
Identifier: 158318152
GI number: 158318152
Start: 7792028
End: 7793218
Strand: Direct
Name: 158318152
Synonym: Franean1_6417
Alternate gene names: NA
Gene position: 7792028-7793218 (Clockwise)
Preceding gene: 158318151
Following gene: 158318153
Centisome position: 86.75
GC content: 72.46
Gene sequence:
>1191_bases ATGCGCCGTCCGCCCCGTCTCGTCCTTGTCCTGGCCGCCGCGCCGTTCGCGGCCGCCCTTGTCGCCGGCTGCACGCAGGG CGGCGGGGCCCCCGGGGGGCCCGCCGCAACGTCCGGGCCGGCCACCACACCGGGTGCCGCGCCGACGGCGGTGGCGGTGC CGGGCGACACCTGGGAGACGGTGGACCCGCGCGCGGCCGGCCTGGACCCGGCGAAGCTCGAGGAGATCGCGCACGTCGCC CAGCAGGGCAAGTCCAACTGCCTGCTGGTCTCGCGCAACGGCAAGATCGCCGGCGAGTGGTACTTCAGGGGCTTCACCCC GACCACGCCGCAGCCGGTCTTCTCCATGACGAAGTCGCTGACGTCCACGCTCGTGGGCATCGCGCAGGACGACGGTGACC TGCGGCTGGACGATTCCGCCGCCACCTGGGTGCCGCAGTGGAAGGGCACGCCGGCGCAGGCCGTGACCGTACGCGACCTG GTGAGCAACGACTCCGGGCGGCAGTGGAGCACGACGATCGACTACCACGACCTGATCGCGGCGACGGACAAGACCGCGTT CGCGATCGCGCTGCCCCAGGACCGGCCGCCCGGCGAGGCCTGGGCCTACAACAACTCGGCCATCCAGACGCTGGAACAGG TGCTGAGCAGCGCCACCGGGCAGGAGGTCAGCGACTACGCCCGGGAGCGGGTCTTCGAGCCGCTCGGCATGAACGACAGT CAGATGACGACCGACCGCGCCGGCAACACCCTGACGTTCATGGGCCTGCAGACGACCTGCCGGGACGTCGCCCGTCTCGG CTACCTGATGCTCGCGCACGGGGAGTGGAACGGTCAGCGGGTCGTGTCGAGCGACTGGATCACCGAGGCCACCGGGCAGT CGTCCACGGAGATGAACGCCGCCTACGGGTATCTGTGGTGGCTCAACCACGAGGGCGTCCTCGCCCAGCCGCTGGCCGCC TCCGACATCTCCGCGGCCGCCGACCCCACCACCCGCCACGGCCAGCTGGTGCCGACGGCGCCGGCGGACATGTACTGGGC GATCGGGCTCGGCAACCAGATCCTGCAGATCGACCCCGGGTCCGGCACGGTCGTCGTCCGGCTGGGTAGCGGGGAGGCCC GGCCGCAGCCGCCGACGTTCGGTGTCGCGGACGCCAGCCGGGTGGTCACCGAGGCCCTCGCCGCCAACTGA
Upstream 100 bases:
>100_bases GGAACCCGCCCGGGACGGAGGTCTCACAGACCTCATATCTGGTGCCCATACGGTGCATCCTCGCCCTGGATCCGGAACTC ACGGCTGATCGAGGTCCCTG
Downstream 100 bases:
>100_bases GCCACCCGCGGTTCCCGGCGGCCGTGCCAGCCGGTCCCTCTGCGGTCCGCGGCCGCCCGTGGCTGTCCCGGTGAGAGATG GCTCTCCCCGGCGATCCCCG
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Class C; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Secreted Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase Class C Family Protein; Beta-Lactamase Class C Protein; Amide Hydrolase; 6-Aminohexanoate-Dimer Hydrolase Lipoprotein; Membrane Or Secreted Beta-Lactamase Family Protein; Beta-Lactamase Class C-Like Protein; Hydrolatse Transmembrane Protein
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRRPPRLVLVLAAAPFAAALVAGCTQGGGAPGGPAATSGPATTPGAAPTAVAVPGDTWETVDPRAAGLDPAKLEEIAHVA QQGKSNCLLVSRNGKIAGEWYFRGFTPTTPQPVFSMTKSLTSTLVGIAQDDGDLRLDDSAATWVPQWKGTPAQAVTVRDL VSNDSGRQWSTTIDYHDLIAATDKTAFAIALPQDRPPGEAWAYNNSAIQTLEQVLSSATGQEVSDYARERVFEPLGMNDS QMTTDRAGNTLTFMGLQTTCRDVARLGYLMLAHGEWNGQRVVSSDWITEATGQSSTEMNAAYGYLWWLNHEGVLAQPLAA SDISAAADPTTRHGQLVPTAPADMYWAIGLGNQILQIDPGSGTVVVRLGSGEARPQPPTFGVADASRVVTEALAAN
Sequences:
>Translated_396_residues MRRPPRLVLVLAAAPFAAALVAGCTQGGGAPGGPAATSGPATTPGAAPTAVAVPGDTWETVDPRAAGLDPAKLEEIAHVA QQGKSNCLLVSRNGKIAGEWYFRGFTPTTPQPVFSMTKSLTSTLVGIAQDDGDLRLDDSAATWVPQWKGTPAQAVTVRDL VSNDSGRQWSTTIDYHDLIAATDKTAFAIALPQDRPPGEAWAYNNSAIQTLEQVLSSATGQEVSDYARERVFEPLGMNDS QMTTDRAGNTLTFMGLQTTCRDVARLGYLMLAHGEWNGQRVVSSDWITEATGQSSTEMNAAYGYLWWLNHEGVLAQPLAA SDISAAADPTTRHGQLVPTAPADMYWAIGLGNQILQIDPGSGTVVVRLGSGEARPQPPTFGVADASRVVTEALAAN >Mature_396_residues MRRPPRLVLVLAAAPFAAALVAGCTQGGGAPGGPAATSGPATTPGAAPTAVAVPGDTWETVDPRAAGLDPAKLEEIAHVA QQGKSNCLLVSRNGKIAGEWYFRGFTPTTPQPVFSMTKSLTSTLVGIAQDDGDLRLDDSAATWVPQWKGTPAQAVTVRDL VSNDSGRQWSTTIDYHDLIAATDKTAFAIALPQDRPPGEAWAYNNSAIQTLEQVLSSATGQEVSDYARERVFEPLGMNDS QMTTDRAGNTLTFMGLQTTCRDVARLGYLMLAHGEWNGQRVVSSDWITEATGQSSTEMNAAYGYLWWLNHEGVLAQPLAA SDISAAADPTTRHGQLVPTAPADMYWAIGLGNQILQIDPGSGTVVVRLGSGEARPQPPTFGVADASRVVTEALAAN
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41713; Mature: 41713
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPPRLVLVLAAAPFAAALVAGCTQGGGAPGGPAATSGPATTPGAAPTAVAVPGDTWET CCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC VDPRAAGLDPAKLEEIAHVAQQGKSNCLLVSRNGKIAGEWYFRGFTPTTPQPVFSMTKSL CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH TSTLVGIAQDDGDLRLDDSAATWVPQWKGTPAQAVTVRDLVSNDSGRQWSTTIDYHDLIA HHHHHEEEECCCCEEECCCCCEECCCCCCCCCCEEEHHHHHCCCCCCEEEEECCHHHHEE ATDKTAFAIALPQDRPPGEAWAYNNSAIQTLEQVLSSATGQEVSDYARERVFEPLGMNDS ECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC QMTTDRAGNTLTFMGLQTTCRDVARLGYLMLAHGEWNGQRVVSSDWITEATGQSSTEMNA CCCCCCCCCEEEEEEHHHHHHHHHHHCEEEEEECCCCCCEEECCCCEECCCCCCCCCCCC AYGYLWWLNHEGVLAQPLAASDISAAADPTTRHGQLVPTAPADMYWAIGLGNQILQIDPG EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC SGTVVVRLGSGEARPQPPTFGVADASRVVTEALAAN CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRRPPRLVLVLAAAPFAAALVAGCTQGGGAPGGPAATSGPATTPGAAPTAVAVPGDTWET CCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC VDPRAAGLDPAKLEEIAHVAQQGKSNCLLVSRNGKIAGEWYFRGFTPTTPQPVFSMTKSL CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH TSTLVGIAQDDGDLRLDDSAATWVPQWKGTPAQAVTVRDLVSNDSGRQWSTTIDYHDLIA HHHHHEEEECCCCEEECCCCCEECCCCCCCCCCEEEHHHHHCCCCCCEEEEECCHHHHEE ATDKTAFAIALPQDRPPGEAWAYNNSAIQTLEQVLSSATGQEVSDYARERVFEPLGMNDS ECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC QMTTDRAGNTLTFMGLQTTCRDVARLGYLMLAHGEWNGQRVVSSDWITEATGQSSTEMNA CCCCCCCCCEEEEEEHHHHHHHHHHHCEEEEEECCCCCCEEECCCCEECCCCCCCCCCCC AYGYLWWLNHEGVLAQPLAASDISAAADPTTRHGQLVPTAPADMYWAIGLGNQILQIDPG EEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC SGTVVVRLGSGEARPQPPTFGVADASRVVTEALAAN CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA