| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318143
Identifier: 158318143
GI number: 158318143
Start: 7777416
End: 7779203
Strand: Direct
Name: 158318143
Synonym: Franean1_6408
Alternate gene names: NA
Gene position: 7777416-7779203 (Clockwise)
Preceding gene: 158318141
Following gene: 158318145
Centisome position: 86.59
GC content: 68.23
Gene sequence:
>1788_bases GTGTTACCGGGCACTGTCGTTGCAGCCGGCCCGCATCGACCACTTCATGTGGATCACCTGGGCGCCGTTCCTGGTGACCC GCTGGCCGGACCTCTGCTCACCGAACGAGGTCAGGTCGGCCGTCCTCACGCATCACCGGAGAGTCCTCGGCTGCCCGCGC GACCACGAGGGCAGCCTCGTCTCGGACGAGACCTGCGAGAGCGTCGCGGAGCGCCTGTGGATCATCGTACTCTCGGAGCG TCAGGAGAAGCTGGTCATCTCCGCCGAGAACCTGAATATACTTCGAGGCATCGGCACCGAGAGGGGAGCCAGGTGACCAC CCCAACCTACGCCGCCGAGCTGGACGCCGCGTTGAGCATCTCCAGCACACAGGAGAGTATCGGCAGCATCAAGGCCGTCG TCGCCAGAGAAATAAAGGCGACCGATTCCTCCGTGCAGATCCGGGACACCGGGTACTTCAATCATTCATATATGCCCGAC TTCGTCCTCGAATGGCCGGACGACGCGGCCGCGGGTCAACGTTTCATGTACCTGAAGTTCGGCGGGGACGTCGACTACTT CGTCCGGGACGTCGCCCTCGTCGAGGACCGCGAGCCGATCGTCTTCAGCATCGGGCGCTACCGGAACGCGGGCGACGCCC ATGTTCGCCTCGCCGCGGAGGCGGGCACCGCCAACACCCTGCTCACCGATGCCGACGGCCTCGCCACGATGATCGAGCGG CGGGATCGCTCCCCCGACATCAGAATCATCTCGACGGCGTTGACGCAGGACGGCCGCGGTGTCCTCGACGCCGTGAACGC CTCGGCCATCGCCGACGGGTTCAGCCAGGGCATCGACGCGGCGCGCGCGCTCGCGGTCGAGGGAACCCGGCGCGCCGCCG AGATCGTCACCGCCAGCCTGCGACGCCGGCAGTCCCGGCTGCTGAACCAGTTCCTCCAGGCCGTCTGGGTGGGCTCCGGG GGAAACATCGCCGGATTTCCGGGTGTCCGCGATCTCTCCGGCGAGGTCACCGACGCCGCCCTGGAATTCCTGCTGACCGG CGAGGAGATAACCGACCCGGTGTTCTGGCGGCGGCTCGGCCGCCGCGCGAGCCTGGAACAGATCGCGCGCCTGCACGTCG ACTCCGCGACGCCGAACCTACAGCACTACGTCACCCAGAACATCGGCGTCCTGCGGGCCCGTTCATATCAGCTGCGGTCG GTTTCGAGAAACGTCACGGATGAAAACCCGCCGTTCGAGTGGAAAATCGAGCGGAAACTGCTCGCGCTGCGCGCCCAGCA GTTCACCGCCTACCTGGACGGCCAGGCGGACGATCCGCACGGAAAGGGTTCCGGCGGGCGGTCCGACGGCGTTCCACTCG CCGGCCTCCTTACCCGGGCGACCGGAACCACCGTGGCAGAACTGGAGATCGCGGCGGAGGGCCGGACGATCGTCTACCGC GGAGAGGACAACATCGACGTCACGCGGGACGAGCGGCTCGCCGCGCTCGCCGAGGCACTCGGGCCGGGCGCCCGAGTCAC GAAGGCGCGTCTCCCGATCGCCGACGACCGCAGTCTCGTCTGCGACTTCACGACCCAGGTCGCCGCGCCGCGCGGCCCGA ACAGGCTCCCGGTCACCGATCTGCTCGCCAGCCTCCCGCTGCTGCGGGAGCTCACCGCGGCGGAGTCAGATCGCCTGTCC GCGCTGCTCGAACCGGCGACTGATCCTGCGCCTCCCCGCGAGGCCGAACCCGGCGACGTCGAGGAGCACGGATACGCGGC TGGACCCGGCGACGTCGAGAAGCACTGA
Upstream 100 bases:
>100_bases TGCTCGGCGGTGAGTTCCAGGGCCACGAGTTCGTCGCGGAGTCGAAGTTCTACAACGGCCATCATGACCAGGGAACGCTT TACGTGGAGTTTCTCGCGAA
Downstream 100 bases:
>100_bases ACGGACCGCCCGGGATCGCTGTCAGCGCCACGACGAGCGCGGCGACCAGCAGCGCGGCGGACACGAACAGCGTGTCCTGG CAGGCCTCGGCAAGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MLPGTVVAAGPHRPLHVDHLGAVPGDPLAGPLLTERGQVGRPHASPESPRLPARPRGQPRLGRDLRERRGAPVDHRTLGA SGEAGHLRREPEYTSRHRHREGSQVTTPTYAAELDAALSISSTQESIGSIKAVVAREIKATDSSVQIRDTGYFNHSYMPD FVLEWPDDAAAGQRFMYLKFGGDVDYFVRDVALVEDREPIVFSIGRYRNAGDAHVRLAAEAGTANTLLTDADGLATMIER RDRSPDIRIISTALTQDGRGVLDAVNASAIADGFSQGIDAARALAVEGTRRAAEIVTASLRRRQSRLLNQFLQAVWVGSG GNIAGFPGVRDLSGEVTDAALEFLLTGEEITDPVFWRRLGRRASLEQIARLHVDSATPNLQHYVTQNIGVLRARSYQLRS VSRNVTDENPPFEWKIERKLLALRAQQFTAYLDGQADDPHGKGSGGRSDGVPLAGLLTRATGTTVAELEIAAEGRTIVYR GEDNIDVTRDERLAALAEALGPGARVTKARLPIADDRSLVCDFTTQVAAPRGPNRLPVTDLLASLPLLRELTAAESDRLS ALLEPATDPAPPREAEPGDVEEHGYAAGPGDVEKH
Sequences:
>Translated_595_residues MLPGTVVAAGPHRPLHVDHLGAVPGDPLAGPLLTERGQVGRPHASPESPRLPARPRGQPRLGRDLRERRGAPVDHRTLGA SGEAGHLRREPEYTSRHRHREGSQVTTPTYAAELDAALSISSTQESIGSIKAVVAREIKATDSSVQIRDTGYFNHSYMPD FVLEWPDDAAAGQRFMYLKFGGDVDYFVRDVALVEDREPIVFSIGRYRNAGDAHVRLAAEAGTANTLLTDADGLATMIER RDRSPDIRIISTALTQDGRGVLDAVNASAIADGFSQGIDAARALAVEGTRRAAEIVTASLRRRQSRLLNQFLQAVWVGSG GNIAGFPGVRDLSGEVTDAALEFLLTGEEITDPVFWRRLGRRASLEQIARLHVDSATPNLQHYVTQNIGVLRARSYQLRS VSRNVTDENPPFEWKIERKLLALRAQQFTAYLDGQADDPHGKGSGGRSDGVPLAGLLTRATGTTVAELEIAAEGRTIVYR GEDNIDVTRDERLAALAEALGPGARVTKARLPIADDRSLVCDFTTQVAAPRGPNRLPVTDLLASLPLLRELTAAESDRLS ALLEPATDPAPPREAEPGDVEEHGYAAGPGDVEKH >Mature_595_residues MLPGTVVAAGPHRPLHVDHLGAVPGDPLAGPLLTERGQVGRPHASPESPRLPARPRGQPRLGRDLRERRGAPVDHRTLGA SGEAGHLRREPEYTSRHRHREGSQVTTPTYAAELDAALSISSTQESIGSIKAVVAREIKATDSSVQIRDTGYFNHSYMPD FVLEWPDDAAAGQRFMYLKFGGDVDYFVRDVALVEDREPIVFSIGRYRNAGDAHVRLAAEAGTANTLLTDADGLATMIER RDRSPDIRIISTALTQDGRGVLDAVNASAIADGFSQGIDAARALAVEGTRRAAEIVTASLRRRQSRLLNQFLQAVWVGSG GNIAGFPGVRDLSGEVTDAALEFLLTGEEITDPVFWRRLGRRASLEQIARLHVDSATPNLQHYVTQNIGVLRARSYQLRS VSRNVTDENPPFEWKIERKLLALRAQQFTAYLDGQADDPHGKGSGGRSDGVPLAGLLTRATGTTVAELEIAAEGRTIVYR GEDNIDVTRDERLAALAEALGPGARVTKARLPIADDRSLVCDFTTQVAAPRGPNRLPVTDLLASLPLLRELTAAESDRLS ALLEPATDPAPPREAEPGDVEEHGYAAGPGDVEKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64294; Mature: 64294
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPGTVVAAGPHRPLHVDHLGAVPGDPLAGPLLTERGQVGRPHASPESPRLPARPRGQPR CCCCCEEECCCCCCEEEHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC LGRDLRERRGAPVDHRTLGASGEAGHLRREPEYTSRHRHREGSQVTTPTYAAELDAALSI CHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHEEE SSTQESIGSIKAVVAREIKATDSSVQIRDTGYFNHSYMPDFVLEWPDDAAAGQRFMYLKF CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCHHCCCEEEEEEE GGDVDYFVRDVALVEDREPIVFSIGRYRNAGDAHVRLAAEAGTANTLLTDADGLATMIER CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHH RDRSPDIRIISTALTQDGRGVLDAVNASAIADGFSQGIDAARALAVEGTRRAAEIVTASL HCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RRRQSRLLNQFLQAVWVGSGGNIAGFPGVRDLSGEVTDAALEFLLTGEEITDPVFWRRLG HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHC RRASLEQIARLHVDSATPNLQHYVTQNIGVLRARSYQLRSVSRNVTDENPPFEWKIERKL CCCCHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCHHHHHHHCCCCCCCCCEEEEHHHHH LALRAQQFTAYLDGQADDPHGKGSGGRSDGVPLAGLLTRATGTTVAELEIAAEGRTIVYR HHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCEEEEE GEDNIDVTRDERLAALAEALGPGARVTKARLPIADDRSLVCDFTTQVAAPRGPNRLPVTD CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHCCCCCCCCCCHHH LLASLPLLRELTAAESDRLSALLEPATDPAPPREAEPGDVEEHGYAAGPGDVEKH HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MLPGTVVAAGPHRPLHVDHLGAVPGDPLAGPLLTERGQVGRPHASPESPRLPARPRGQPR CCCCCEEECCCCCCEEEHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC LGRDLRERRGAPVDHRTLGASGEAGHLRREPEYTSRHRHREGSQVTTPTYAAELDAALSI CHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHEEE SSTQESIGSIKAVVAREIKATDSSVQIRDTGYFNHSYMPDFVLEWPDDAAAGQRFMYLKF CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCHHCCCEEEEEEE GGDVDYFVRDVALVEDREPIVFSIGRYRNAGDAHVRLAAEAGTANTLLTDADGLATMIER CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHH RDRSPDIRIISTALTQDGRGVLDAVNASAIADGFSQGIDAARALAVEGTRRAAEIVTASL HCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RRRQSRLLNQFLQAVWVGSGGNIAGFPGVRDLSGEVTDAALEFLLTGEEITDPVFWRRLG HHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHC RRASLEQIARLHVDSATPNLQHYVTQNIGVLRARSYQLRSVSRNVTDENPPFEWKIERKL CCCCHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCHHHHHHHCCCCCCCCCEEEEHHHHH LALRAQQFTAYLDGQADDPHGKGSGGRSDGVPLAGLLTRATGTTVAELEIAAEGRTIVYR HHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCEEEEE GEDNIDVTRDERLAALAEALGPGARVTKARLPIADDRSLVCDFTTQVAAPRGPNRLPVTD CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHCCCCCCCCCCHHH LLASLPLLRELTAAESDRLSALLEPATDPAPPREAEPGDVEEHGYAAGPGDVEKH HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA