| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318141
Identifier: 158318141
GI number: 158318141
Start: 7776313
End: 7776657
Strand: Direct
Name: 158318141
Synonym: Franean1_6406
Alternate gene names: NA
Gene position: 7776313-7776657 (Clockwise)
Preceding gene: 158318140
Following gene: 158318143
Centisome position: 86.58
GC content: 69.28
Gene sequence:
>345_bases ATGCCCGGTGACCTTCCGCCGAGCAGCGGGCCGACGTCGCGGGTATCGATTCCCCACGGCGGAGGCGTTACAGTCACCGT CATGGAGCCCGTCCAGGATTCCGGTACGGACGACTGCTACTCCTGCGGCGGTAATGCGGCGCTCAACGATCTGCCGCCGT GGCAACGAATCCTCGTCGGCACCGGTTGGCGGGTCGCGCACGCGATCAACTGCGCACTGCCCGGATGGCTGGTCGTCATC GCCCGCCGCCACATCACCACTGTGGCCGAGCTGGAGGCGGCGGAGGCCACCGAGCTGGGTCTCGTCACCTGGCGGCTCAG CCGGGCCCTGACCACCGAGCCCTGA
Upstream 100 bases:
>100_bases CTGGTCCGTCTCGACCGGATCTCCGTCGAGGAGCTGGACGAGCTGGTCGTCGAGGCCTGGCTGCTGCGGGCCCCGAAACG CGCCGCGAGGGCATACCTGG
Downstream 100 bases:
>100_bases CCACCGCGGCCGGTCAGCGGTTGCGCAGGCGTTCCACCGCGCGGCGGTCACGTTTGGTCGGACGTCCCGTCCCACGGTCG CGAACCGCCATCACCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPGDLPPSSGPTSRVSIPHGGGVTVTVMEPVQDSGTDDCYSCGGNAALNDLPPWQRILVGTGWRVAHAINCALPGWLVVI ARRHITTVAELEAAEATELGLVTWRLSRALTTEP
Sequences:
>Translated_114_residues MPGDLPPSSGPTSRVSIPHGGGVTVTVMEPVQDSGTDDCYSCGGNAALNDLPPWQRILVGTGWRVAHAINCALPGWLVVI ARRHITTVAELEAAEATELGLVTWRLSRALTTEP >Mature_113_residues PGDLPPSSGPTSRVSIPHGGGVTVTVMEPVQDSGTDDCYSCGGNAALNDLPPWQRILVGTGWRVAHAINCALPGWLVVIA RRHITTVAELEAAEATELGLVTWRLSRALTTEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12012; Mature: 11881
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDLPPSSGPTSRVSIPHGGGVTVTVMEPVQDSGTDDCYSCGGNAALNDLPPWQRILVG CCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHEEEC TGWRVAHAINCALPGWLVVIARRHITTVAELEAAEATELGLVTWRLSRALTTEP CCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCCCC >Mature Secondary Structure PGDLPPSSGPTSRVSIPHGGGVTVTVMEPVQDSGTDDCYSCGGNAALNDLPPWQRILVG CCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHEEEC TGWRVAHAINCALPGWLVVIARRHITTVAELEAAEATELGLVTWRLSRALTTEP CCCHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA