Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is gsiB [H]

Identifier: 158318105

GI number: 158318105

Start: 7729228

End: 7730148

Strand: Reverse

Name: gsiB [H]

Synonym: Franean1_6369

Alternate gene names: 158318105

Gene position: 7730148-7729228 (Counterclockwise)

Preceding gene: 158318106

Following gene: 158318104

Centisome position: 86.06

GC content: 67.21

Gene sequence:

>921_bases
ATGGCCGGCTGCATCTGGGGCGGCCTGCCCGTGCGTTTCTCGAACCTGCGCATCCTGGTCGCGGAGTCCGGCGGCTCCTG
GCTCCCGCACTTCATCCAGCGGCTGGACTTCAACGTCGGCCACTCGCCGCTGACCAGCGCGGGCTGGCCCGACCCGGACC
TGTCGCCGCTCGACCTGGTCCAACGGACGTTCACCTTCAGCACCCAGGAGCTCGACGTCGCCCGGGATCTGGAGAAGGAG
CTGGGCATCACCGCCTGGATGATGGAGGACGACTACCCCCACATCGAGTCGGTCTGGCCCGACACGGCCGCCCAGTTCAC
GCGGGCCACCGCCGGCTTCGACCCCGACTTCACCGAGCGGCTGGCGTGGCGGACCGGTTCGGAGCTCTTCCGCTTCCCGA
TGCCGACGCCGCAGACCGAGACCGAAGCGGCAGACCCTCGCAACGCCTACGCGGTCAGCGCCGTACTGGGTAACGCCTTA
TATGGGACCTTATTAAACGACGACAATTCCGGTGCGGTCCAGTACTCCATGGCCGAGTCGCTCGACATCCCCGACAACGG
GACCACCTTCGAGCTGAAACTACGGTCTGGCCTGGTTTCCTCTGACGGCACTCCGCTGAATTCTGAGGCGGTGAAATTCA
ACTGGAACCGCATCAAGGATCCGGCTACCGGGGCGTCAACCCGGGCGGAGGCCGGCCTGGTCTCCGCGACCGACGTCGTG
GATGATCTCACGCTCAAGATAACGCTGTCCAAGCCCGTGCTGAGGTTCGCCGGCGCCATCACCGCGTCGCCCATGAACTG
GATCGCCTCGCCGGCGGCGCTGCGCCTGGGCCAGACGGAGTTCGACAAGAAGCCGGTCGGCGCGCCCCGACGGCGATCGC
CCCGCTGCCGGGCCCTGAGCTCAGCCCGACATCACCGGTGA

Upstream 100 bases:

>100_bases
CCACACCGAGGGGCATTCCGCGTTCCCGAAGCGGGTCGGGAACGACTCCTATCCCTACGGTCTGCACCTGACTCTCTACC
AGGCGGGAGTCATGGAGTTC

Downstream 100 bases:

>100_bases
CGAGGAAGCGGTAGAAATGAGAACCGTAGGAATTGTGACGGGAGCCGGCCGTGGCATCGGCCTGGCGTGTGCCGAGCGCA
TGGTCGACACGGTCGACTTA

Product: dipeptide ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAGCIWGGLPVRFSNLRILVAESGGSWLPHFIQRLDFNVGHSPLTSAGWPDPDLSPLDLVQRTFTFSTQELDVARDLEKE
LGITAWMMEDDYPHIESVWPDTAAQFTRATAGFDPDFTERLAWRTGSELFRFPMPTPQTETEAADPRNAYAVSAVLGNAL
YGTLLNDDNSGAVQYSMAESLDIPDNGTTFELKLRSGLVSSDGTPLNSEAVKFNWNRIKDPATGASTRAEAGLVSATDVV
DDLTLKITLSKPVLRFAGAITASPMNWIASPAALRLGQTEFDKKPVGAPRRRSPRCRALSSARHHR

Sequences:

>Translated_306_residues
MAGCIWGGLPVRFSNLRILVAESGGSWLPHFIQRLDFNVGHSPLTSAGWPDPDLSPLDLVQRTFTFSTQELDVARDLEKE
LGITAWMMEDDYPHIESVWPDTAAQFTRATAGFDPDFTERLAWRTGSELFRFPMPTPQTETEAADPRNAYAVSAVLGNAL
YGTLLNDDNSGAVQYSMAESLDIPDNGTTFELKLRSGLVSSDGTPLNSEAVKFNWNRIKDPATGASTRAEAGLVSATDVV
DDLTLKITLSKPVLRFAGAITASPMNWIASPAALRLGQTEFDKKPVGAPRRRSPRCRALSSARHHR
>Mature_305_residues
AGCIWGGLPVRFSNLRILVAESGGSWLPHFIQRLDFNVGHSPLTSAGWPDPDLSPLDLVQRTFTFSTQELDVARDLEKEL
GITAWMMEDDYPHIESVWPDTAAQFTRATAGFDPDFTERLAWRTGSELFRFPMPTPQTETEAADPRNAYAVSAVLGNALY
GTLLNDDNSGAVQYSMAESLDIPDNGTTFELKLRSGLVSSDGTPLNSEAVKFNWNRIKDPATGASTRAEAGLVSATDVVD
DLTLKITLSKPVLRFAGAITASPMNWIASPAALRLGQTEFDKKPVGAPRRRSPRCRALSSARHHR

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=144, Percent_Identity=34.7222222222222, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 33492; Mature: 33361

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGCIWGGLPVRFSNLRILVAESGGSWLPHFIQRLDFNVGHSPLTSAGWPDPDLSPLDLV
CCCCEECCCCEEEECEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
QRTFTFSTQELDVARDLEKELGITAWMMEDDYPHIESVWPDTAAQFTRATAGFDPDFTER
HHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHH
LAWRTGSELFRFPMPTPQTETEAADPRNAYAVSAVLGNALYGTLLNDDNSGAVQYSMAES
HHHCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEEEHHHC
LDIPDNGTTFELKLRSGLVSSDGTPLNSEAVKFNWNRIKDPATGASTRAEAGLVSATDVV
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHCCCCCHHHHH
DDLTLKITLSKPVLRFAGAITASPMNWIASPAALRLGQTEFDKKPVGAPRRRSPRCRALS
CCEEEEEEECCHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
SARHHR
HHHCCC
>Mature Secondary Structure 
AGCIWGGLPVRFSNLRILVAESGGSWLPHFIQRLDFNVGHSPLTSAGWPDPDLSPLDLV
CCCEECCCCEEEECEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
QRTFTFSTQELDVARDLEKELGITAWMMEDDYPHIESVWPDTAAQFTRATAGFDPDFTER
HHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHH
LAWRTGSELFRFPMPTPQTETEAADPRNAYAVSAVLGNALYGTLLNDDNSGAVQYSMAES
HHHCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCEEEEEHHHC
LDIPDNGTTFELKLRSGLVSSDGTPLNSEAVKFNWNRIKDPATGASTRAEAGLVSATDVV
CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHCCCCCHHHHH
DDLTLKITLSKPVLRFAGAITASPMNWIASPAALRLGQTEFDKKPVGAPRRRSPRCRALS
CCEEEEEEECCHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
SARHHR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA