| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318106
Identifier: 158318106
GI number: 158318106
Start: 7730275
End: 7730895
Strand: Reverse
Name: 158318106
Synonym: Franean1_6370
Alternate gene names: NA
Gene position: 7730895-7730275 (Counterclockwise)
Preceding gene: 158318107
Following gene: 158318105
Centisome position: 86.07
GC content: 68.92
Gene sequence:
>621_bases ATGCTTCCGCTGTTCTCCGTCAACGCCCACGTGATCGAACCGCCCGACATCTTCACCGGTCGGGTGCCGTCGAAGTGGGC CGACGCGGTGCCCCGCGTCGTCACGCTCGACAACGGCGGTGAGATCTGGATGTTCGGCGAGGGCATCGGTGCCCTGCACC GGACCTGCTGCCTGGGCGGCGCCCGCGACGAACCGGCCTGGCGCACGGACGTCGCCGACTTCAACAAGCTGAGCCGCATC GAGGACCTGCGGCCCGGTTGCTACGACGCCGCCGAGCGGATCAAGGACATGGATGCCGACGGCGTCACCGTCGTCGCGTG TACGTCGTATCCCGCCGGGATGGGCTTCGCCGGCGACCTCTTCGCCAAGGGGAAGGACCCGGAGGTGGGGCTCGCCGCGA TGCGGGCCTGGAACGACTGGTATCACGAGGACTGGGTGGGTGCCTGCCCCAGTCGATTCGTCCCGGTCGGCTGCACCTGG TACCTGGATCCGAGTGTGGCGGCGGCCGAGGTGTACCGGAACGCGGAGCGAGGATTTCGGGGGGTCTCGTTCCGGAACCC CACCGATCTCGGTCAGCCCTGGCTCGGCAGCGGCCACTGGGATCCGTTTCTGCGGGCCTGA
Upstream 100 bases:
>100_bases CGTGGCGGAGTGTGGAGCAGGGCGCGGCCACGAGCGTCCTTGTCGCGGGCTCGCCGGCGGCAGGTTCGCGCGGTGCCCGG TTACGCAAGAAGGGCTGATC
Downstream 100 bases:
>100_bases GAGGAAACCCAGACCGTCCTGGTCCACCACACCGAGGGGCATTCCGCGTTCCCGAAGCGGGTCGGGAACGACTCCTATCC CTACGGTCTGCACCTGACTC
Product: amidohydrolase
Products: NA
Alternate protein names: Amidase; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLPLFSVNAHVIEPPDIFTGRVPSKWADAVPRVVTLDNGGEIWMFGEGIGALHRTCCLGGARDEPAWRTDVADFNKLSRI EDLRPGCYDAAERIKDMDADGVTVVACTSYPAGMGFAGDLFAKGKDPEVGLAAMRAWNDWYHEDWVGACPSRFVPVGCTW YLDPSVAAAEVYRNAERGFRGVSFRNPTDLGQPWLGSGHWDPFLRA
Sequences:
>Translated_206_residues MLPLFSVNAHVIEPPDIFTGRVPSKWADAVPRVVTLDNGGEIWMFGEGIGALHRTCCLGGARDEPAWRTDVADFNKLSRI EDLRPGCYDAAERIKDMDADGVTVVACTSYPAGMGFAGDLFAKGKDPEVGLAAMRAWNDWYHEDWVGACPSRFVPVGCTW YLDPSVAAAEVYRNAERGFRGVSFRNPTDLGQPWLGSGHWDPFLRA >Mature_206_residues MLPLFSVNAHVIEPPDIFTGRVPSKWADAVPRVVTLDNGGEIWMFGEGIGALHRTCCLGGARDEPAWRTDVADFNKLSRI EDLRPGCYDAAERIKDMDADGVTVVACTSYPAGMGFAGDLFAKGKDPEVGLAAMRAWNDWYHEDWVGACPSRFVPVGCTW YLDPSVAAAEVYRNAERGFRGVSFRNPTDLGQPWLGSGHWDPFLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22652; Mature: 22652
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLFSVNAHVIEPPDIFTGRVPSKWADAVPRVVTLDNGGEIWMFGEGIGALHRTCCLGG CCCEECCCCEEECCCCCCCCCCCCHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHCCC ARDEPAWRTDVADFNKLSRIEDLRPGCYDAAERIKDMDADGVTVVACTSYPAGMGFAGDL CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH FAKGKDPEVGLAAMRAWNDWYHEDWVGACPSRFVPVGCTWYLDPSVAAAEVYRNAERGFR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEECCCHHHHHHHHHHHHCCC GVSFRNPTDLGQPWLGSGHWDPFLRA CCCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MLPLFSVNAHVIEPPDIFTGRVPSKWADAVPRVVTLDNGGEIWMFGEGIGALHRTCCLGG CCCEECCCCEEECCCCCCCCCCCCHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHCCC ARDEPAWRTDVADFNKLSRIEDLRPGCYDAAERIKDMDADGVTVVACTSYPAGMGFAGDL CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH FAKGKDPEVGLAAMRAWNDWYHEDWVGACPSRFVPVGCTWYLDPSVAAAEVYRNAERGFR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEECCCHHHHHHHHHHHHCCC GVSFRNPTDLGQPWLGSGHWDPFLRA CCCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA