| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318064
Identifier: 158318064
GI number: 158318064
Start: 7680812
End: 7681795
Strand: Direct
Name: 158318064
Synonym: Franean1_6324
Alternate gene names: NA
Gene position: 7680812-7681795 (Clockwise)
Preceding gene: 158318063
Following gene: 158318065
Centisome position: 85.51
GC content: 64.94
Gene sequence:
>984_bases ATGCAGGCATCGCCGAGCGGGGCGGAAATCCTCTCCGGGTGTGCAGTTCCGGTTCTTTGTGTGCCGGTCGACATGTCCGG AACGTCTCTTGAAAGAATCGACATGGGCTGGTGTGAGTACCGGCTCTCCGGAGTGACCGCGAGCCGTACCACCCAGGTAC TCGAACTCTGCGACGGCGGGACGTCCATCGAAAAGATCGCGGCTCGGCTCGGCGCGCCGCCCGGAGCGGTGGCGGCCACG GTCACCGCGTTGTATGTACGCGGGATCGTCCGGGACAGCAGCCGGCAGAATGTTTCGGCGATGGCCTTTCAGCAGCATCT TGTCTCCGCCGGTCGAACCTTGCGTACCATGATGAGTGCGGACGCGGACCTGCTCGGCGGGCAGCTTCACCGGCGACGCC TGCTGGGCTCGCTGGTGGAGACGTTCCACTTCGTCTCCGCAGCCTCCCATCATATCGGCGCGGCGGTGGCGCATGCCGCC GACCCCGAGGTCCGGGACTCGTTGTCGGCATTATTCAACGAAGAATCCAGGCATGGTCGAAGCCTGCGAGCGGGCCTGCT GGCGGCGGGTCTGGACGATGCCGCGATACGGCACAGCAGGCCTCTTCCCGGGACCCAGAACGTCGTGAACTTTCTTCGCG CGCTGGCGGCGACGGATCTTCTTTCCTACGCGGTCTGCGCCGCCGTGAACGAGAGCCCGAAGACGGACACGGCGATCAAG GAGGGATGGGACGCCATCATCGCGCTGGACCTTCTGCCGGCCGACGCGCTCGTGCCCTTCCGCGGTCACGAACTGGAGGA CGAGGATTCGGGGCATGCCGCGATCGCGGACGTCATCTTTACTGAGCGGACAACCCTCGGGGCAGCGGAACAGCGACGGA TCCAAGGTGATCTGGAGTCCTTCATCGCCGTGCAGCGGAGTTGCTACCAGGAGATGAAGGAGTTCTACAGTGCCCCCGAC GGACCCGTGGCATGGGGGATCTGA
Upstream 100 bases:
>100_bases CATCACCAGTTACAGTCCGGGCGGGCTGGAGATCCTGGATCCGGATCTGGACCCTCCCGTGTTGATCAGTGACCTTTCGG ATCGGTCATGAAGGGGTAGT
Downstream 100 bases:
>100_bases CCATGAGCGACCCGGTGCCGCGGGGACGCACGTGGGTGACGGTTCTCTTTTCCGGCGGAGCCCTGACGTCGCGGTCATCG GCGTGGGGCCGGGCCATACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQASPSGAEILSGCAVPVLCVPVDMSGTSLERIDMGWCEYRLSGVTASRTTQVLELCDGGTSIEKIAARLGAPPGAVAAT VTALYVRGIVRDSSRQNVSAMAFQQHLVSAGRTLRTMMSADADLLGGQLHRRRLLGSLVETFHFVSAASHHIGAAVAHAA DPEVRDSLSALFNEESRHGRSLRAGLLAAGLDDAAIRHSRPLPGTQNVVNFLRALAATDLLSYAVCAAVNESPKTDTAIK EGWDAIIALDLLPADALVPFRGHELEDEDSGHAAIADVIFTERTTLGAAEQRRIQGDLESFIAVQRSCYQEMKEFYSAPD GPVAWGI
Sequences:
>Translated_327_residues MQASPSGAEILSGCAVPVLCVPVDMSGTSLERIDMGWCEYRLSGVTASRTTQVLELCDGGTSIEKIAARLGAPPGAVAAT VTALYVRGIVRDSSRQNVSAMAFQQHLVSAGRTLRTMMSADADLLGGQLHRRRLLGSLVETFHFVSAASHHIGAAVAHAA DPEVRDSLSALFNEESRHGRSLRAGLLAAGLDDAAIRHSRPLPGTQNVVNFLRALAATDLLSYAVCAAVNESPKTDTAIK EGWDAIIALDLLPADALVPFRGHELEDEDSGHAAIADVIFTERTTLGAAEQRRIQGDLESFIAVQRSCYQEMKEFYSAPD GPVAWGI >Mature_327_residues MQASPSGAEILSGCAVPVLCVPVDMSGTSLERIDMGWCEYRLSGVTASRTTQVLELCDGGTSIEKIAARLGAPPGAVAAT VTALYVRGIVRDSSRQNVSAMAFQQHLVSAGRTLRTMMSADADLLGGQLHRRRLLGSLVETFHFVSAASHHIGAAVAHAA DPEVRDSLSALFNEESRHGRSLRAGLLAAGLDDAAIRHSRPLPGTQNVVNFLRALAATDLLSYAVCAAVNESPKTDTAIK EGWDAIIALDLLPADALVPFRGHELEDEDSGHAAIADVIFTERTTLGAAEQRRIQGDLESFIAVQRSCYQEMKEFYSAPD GPVAWGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34774; Mature: 34774
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASPSGAEILSGCAVPVLCVPVDMSGTSLERIDMGWCEYRLSGVTASRTTQVLELCDGG CCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC TSIEKIAARLGAPPGAVAATVTALYVRGIVRDSSRQNVSAMAFQQHLVSAGRTLRTMMSA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC DADLLGGQLHRRRLLGSLVETFHFVSAASHHIGAAVAHAADPEVRDSLSALFNEESRHGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCH SLRAGLLAAGLDDAAIRHSRPLPGTQNVVNFLRALAATDLLSYAVCAAVNESPKTDTAIK HHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH EGWDAIIALDLLPADALVPFRGHELEDEDSGHAAIADVIFTERTTLGAAEQRRIQGDLES HCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCHHHHHHHHHHHHH FIAVQRSCYQEMKEFYSAPDGPVAWGI HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQASPSGAEILSGCAVPVLCVPVDMSGTSLERIDMGWCEYRLSGVTASRTTQVLELCDGG CCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC TSIEKIAARLGAPPGAVAATVTALYVRGIVRDSSRQNVSAMAFQQHLVSAGRTLRTMMSA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC DADLLGGQLHRRRLLGSLVETFHFVSAASHHIGAAVAHAADPEVRDSLSALFNEESRHGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCH SLRAGLLAAGLDDAAIRHSRPLPGTQNVVNFLRALAATDLLSYAVCAAVNESPKTDTAIK HHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH EGWDAIIALDLLPADALVPFRGHELEDEDSGHAAIADVIFTERTTLGAAEQRRIQGDLES HCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCHHHHHHHHHHHHH FIAVQRSCYQEMKEFYSAPDGPVAWGI HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA