| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318053
Identifier: 158318053
GI number: 158318053
Start: 7666831
End: 7667115
Strand: Reverse
Name: 158318053
Synonym: Franean1_6313
Alternate gene names: NA
Gene position: 7667115-7666831 (Counterclockwise)
Preceding gene: 158318058
Following gene: 158318052
Centisome position: 85.36
GC content: 64.91
Gene sequence:
>285_bases ATGACGGACGTGGCTGCACAGCAAACATCGGTGGCGGCGGAACCGGTGTTGTTCGGCGTGGTCCGCTTCGAGGAGGACGG TTCTGGCCGGGTACGGGACACGGTGATCACATTCCGGTCGGCGGAGGACGCGGAGGCGTTCGCGCGGGATCGGTGCTGGA CGGGATACCAGGTGTGCGCGCTGCGGTTCTTCGTGGAGGAGAAGCCGTCGGAGCTGGGTGACTGGATGGTGCTCGGCAAT CATCTGGATCACCTGGTTACACGACGCGCACGGCGTCATCGGTGA
Upstream 100 bases:
>100_bases CCTGGGTGCGTCAGCGTACGTCCTGGCTGCCCCGACTCTGCGGGCCCGTCTCCGGGGCGGGGGCCGGCTATGGGCGACCA GGCAGGAAGGGAGAGATGCC
Downstream 100 bases:
>100_bases CCGCACACCAGGCCCGGCCACCCCGTGCAGATGCGGTGCGGGATCGGTCGCTGGCGGCGGTGGTGATGTTGCCGTGGGGT GCGGACACCTGGGCGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTDVAAQQTSVAAEPVLFGVVRFEEDGSGRVRDTVITFRSAEDAEAFARDRCWTGYQVCALRFFVEEKPSELGDWMVLGN HLDHLVTRRARRHR
Sequences:
>Translated_94_residues MTDVAAQQTSVAAEPVLFGVVRFEEDGSGRVRDTVITFRSAEDAEAFARDRCWTGYQVCALRFFVEEKPSELGDWMVLGN HLDHLVTRRARRHR >Mature_93_residues TDVAAQQTSVAAEPVLFGVVRFEEDGSGRVRDTVITFRSAEDAEAFARDRCWTGYQVCALRFFVEEKPSELGDWMVLGNH LDHLVTRRARRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10741; Mature: 10610
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVAAQQTSVAAEPVLFGVVRFEEDGSGRVRDTVITFRSAEDAEAFARDRCWTGYQVCA CCCCCCCCHHHHHCHHEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHH LRFFVEEKPSELGDWMVLGNHLDHLVTRRARRHR HHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDVAAQQTSVAAEPVLFGVVRFEEDGSGRVRDTVITFRSAEDAEAFARDRCWTGYQVCA CCCCCCCHHHHHCHHEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHH LRFFVEEKPSELGDWMVLGNHLDHLVTRRARRHR HHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA