| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318058
Identifier: 158318058
GI number: 158318058
Start: 7672252
End: 7673349
Strand: Reverse
Name: 158318058
Synonym: Franean1_6318
Alternate gene names: NA
Gene position: 7673349-7672252 (Counterclockwise)
Preceding gene: 158318060
Following gene: 158318053
Centisome position: 85.43
GC content: 57.56
Gene sequence:
>1098_bases GTGGTGGGCAAGGTGTTCCCGCCCAGTTCGGAGCGAGCGTGGAAGGAGTTCCAAGATGCAGTAGAGCGACACGGAGGAAA GGTCTTGGAGGAGTCCTGGATGGGCAGTGCAACGCCCCACCGGATCCGATGCCGCGAGGGCCATAGCGCTCGGCCAACTC CGAACGCCGTGCAGCGAGGGCAGGGTATCTGCTGGTCCTGCAGCGGCAGCAATCCGGAGGCGGCTTGGCGAGATTTTAGA CAGAATGTGAAAAGGCAGGGCGGTAGCGTAGTCGAGCCGCATTGGCTAGGCAAGGACAAGCGTCATCGCGTAGTATGCTC CAACGGACATCTTTGCGATCCCCGACCAGGGTACGTCCGGAGCGGCGGGGGCATCTGTCGGATCTGTTCCCGTAACGATT CGGCGACAGCGTGGAAGGAATTTAAACAAAAGGTTAAAGCGGCTGGCGGTGCGGTTATTGAGCCGCGGTGGCTTGGAAAA GCGGCACCACACAGAGCCATTTGTCCGAATGGCCACCAATATTCACCGACCCCTAATAATGTTCGCGATGGCACGGGGCT TTGCCGGGTGTGTGTTGGCAGCGATCCTGAGACCGCACGGCGCAAATTTAGAGAGAGGGTCGAGGAGCTCGGCGGAGAAG TTGTTGAGTCGGCATGGTTCGGCGTCGACGTGCCGCATCAGGTCATCTGTAGAGATGGTCATCTAGTAACGCCACGGCCG ACCAGCGTGCAGCAGGGCCAGGGTATCTGCCGCGAATGTGCGGGCAAGATTTGGGACGCATTTTATATCGTCCAGGACGA GTCGACAATGATCTTGAAGGTGGGTGTTACCTCGGGTTCCCCCCGCCCCCGTTTGATGCTCCATGCTCGTGATGGATTTA CTAAGGTTCTACTCACCGCAACAGGCCTTCCTGGTAAAGTAGCACCTGATCTGGAGACCGCAGTCCTACGGGCTCTTGCG CAGGCAGGAATTACACCCGTACGCGGGCGAGAATATTTCGATTTGACTGCGAAGGACTTGATTTTTGGCATTGTCGACCG GCGACTAAGCGAGCTGGACCATATCAATTTCGACAGCAGAAGGAAGCTTGATAGATAG
Upstream 100 bases:
>100_bases GTCGAGCGCGTAGATGGCAGGACGGTTGGGAGTGTACGATCGCCATTGCACAGCTCCAAGTTTCAGATGCTGGTGCTGCC CCTAAAGTAATGGAGAGCGC
Downstream 100 bases:
>100_bases ATTTAGAGAAATGCCGTTAAGAAAGACTGAAGCTGCAGATTAAGAGAAGCGGGCGCCCCGTCCACGGACGTCCACCGATG TTCCACCGGGTCGGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MVGKVFPPSSERAWKEFQDAVERHGGKVLEESWMGSATPHRIRCREGHSARPTPNAVQRGQGICWSCSGSNPEAAWRDFR QNVKRQGGSVVEPHWLGKDKRHRVVCSNGHLCDPRPGYVRSGGGICRICSRNDSATAWKEFKQKVKAAGGAVIEPRWLGK AAPHRAICPNGHQYSPTPNNVRDGTGLCRVCVGSDPETARRKFRERVEELGGEVVESAWFGVDVPHQVICRDGHLVTPRP TSVQQGQGICRECAGKIWDAFYIVQDESTMILKVGVTSGSPRPRLMLHARDGFTKVLLTATGLPGKVAPDLETAVLRALA QAGITPVRGREYFDLTAKDLIFGIVDRRLSELDHINFDSRRKLDR
Sequences:
>Translated_365_residues MVGKVFPPSSERAWKEFQDAVERHGGKVLEESWMGSATPHRIRCREGHSARPTPNAVQRGQGICWSCSGSNPEAAWRDFR QNVKRQGGSVVEPHWLGKDKRHRVVCSNGHLCDPRPGYVRSGGGICRICSRNDSATAWKEFKQKVKAAGGAVIEPRWLGK AAPHRAICPNGHQYSPTPNNVRDGTGLCRVCVGSDPETARRKFRERVEELGGEVVESAWFGVDVPHQVICRDGHLVTPRP TSVQQGQGICRECAGKIWDAFYIVQDESTMILKVGVTSGSPRPRLMLHARDGFTKVLLTATGLPGKVAPDLETAVLRALA QAGITPVRGREYFDLTAKDLIFGIVDRRLSELDHINFDSRRKLDR >Mature_365_residues MVGKVFPPSSERAWKEFQDAVERHGGKVLEESWMGSATPHRIRCREGHSARPTPNAVQRGQGICWSCSGSNPEAAWRDFR QNVKRQGGSVVEPHWLGKDKRHRVVCSNGHLCDPRPGYVRSGGGICRICSRNDSATAWKEFKQKVKAAGGAVIEPRWLGK AAPHRAICPNGHQYSPTPNNVRDGTGLCRVCVGSDPETARRKFRERVEELGGEVVESAWFGVDVPHQVICRDGHLVTPRP TSVQQGQGICRECAGKIWDAFYIVQDESTMILKVGVTSGSPRPRLMLHARDGFTKVLLTATGLPGKVAPDLETAVLRALA QAGITPVRGREYFDLTAKDLIFGIVDRRLSELDHINFDSRRKLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40410; Mature: 40410
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGKVFPPSSERAWKEFQDAVERHGGKVLEESWMGSATPHRIRCREGHSARPTPNAVQRG CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHC QGICWSCSGSNPEAAWRDFRQNVKRQGGSVVEPHWLGKDKRHRVVCSNGHLCDPRPGYVR CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCEE SGGGICRICSRNDSATAWKEFKQKVKAAGGAVIEPRWLGKAAPHRAICPNGHQYSPTPNN CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECCHHCCCCCCCCCCCCCCCCCCCCCCC VRDGTGLCRVCVGSDPETARRKFRERVEELGGEVVESAWFGVDVPHQVICRDGHLVTPRP CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCEEECCCC TSVQQGQGICRECAGKIWDAFYIVQDESTMILKVGVTSGSPRPRLMLHARDGFTKVLLTA CCHHHHCCHHHHHHHHHHEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEE TGLPGKVAPDLETAVLRALAQAGITPVRGREYFDLTAKDLIFGIVDRRLSELDHINFDSR CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCHH RKLDR HCCCC >Mature Secondary Structure MVGKVFPPSSERAWKEFQDAVERHGGKVLEESWMGSATPHRIRCREGHSARPTPNAVQRG CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHC QGICWSCSGSNPEAAWRDFRQNVKRQGGSVVEPHWLGKDKRHRVVCSNGHLCDPRPGYVR CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCEE SGGGICRICSRNDSATAWKEFKQKVKAAGGAVIEPRWLGKAAPHRAICPNGHQYSPTPNN CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECCHHCCCCCCCCCCCCCCCCCCCCCCC VRDGTGLCRVCVGSDPETARRKFRERVEELGGEVVESAWFGVDVPHQVICRDGHLVTPRP CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCEEECCCC TSVQQGQGICRECAGKIWDAFYIVQDESTMILKVGVTSGSPRPRLMLHARDGFTKVLLTA CCHHHHCCHHHHHHHHHHEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEE TGLPGKVAPDLETAVLRALAQAGITPVRGREYFDLTAKDLIFGIVDRRLSELDHINFDSR CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCHH RKLDR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA