| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is epsP [H]
Identifier: 158318031
GI number: 158318031
Start: 7640453
End: 7640881
Strand: Direct
Name: epsP [H]
Synonym: Franean1_6291
Alternate gene names: 158318031
Gene position: 7640453-7640881 (Clockwise)
Preceding gene: 158318030
Following gene: 158318034
Centisome position: 85.06
GC content: 71.1
Gene sequence:
>429_bases GTGACCGCCACACCGGATCGGCTGCTGGTGGTCTGCCTGGGTAACCACTGCCGGTCCCCGCTCGCCGAAGCCGTCCTCAC CCAGAAGTCGGGTGGGGCCTTGGATGTGCGGTCCGCGGGGACGGCCGGGAAGTGGAGCAGACGGCCCGCCCACGCCACGA TGACCGCAGTGGCCGCCCGGCACGGCTACGACCTGTCCGCCCATCGCGGCCAGCAGGTCACCCCGGAGCTGCTGGCCTGG GCCGATGCGGTCCTGGCCATGGACGCCAAGAACCTCACCGACCTCAAGCCCCTGACCATCCAGACGTCGACCACGGCCGT CCTATACCTGGGCGACCGGGATGTTCCCGACCCATGGGGCGGGGACGAGGAGGCGTTCACCGCCTGCTTGCGGATCATCG AGGCGGGCGCGGCCCGCCACCTGCCCTAA
Upstream 100 bases:
>100_bases TCAGCCTGCCGTTCCACCCCGCCCTCACCCCCGGCGACGTCCAGCACGTCACAGACCTCCTGGACCAGGCGCTTACAGAC GCCCGGCCCCGGGCCGACGG
Downstream 100 bases:
>100_bases CGCCAGCCAGCCGCGTCCACGACCACATCCGCGAGACTTTCGGCCGCGTCCGGCCGACCGAACCCCCGCGCCCGCTCCGC CATCACGGTGCGGGCCGCGG
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTATPDRLLVVCLGNHCRSPLAEAVLTQKSGGALDVRSAGTAGKWSRRPAHATMTAVAARHGYDLSAHRGQQVTPELLAW ADAVLAMDAKNLTDLKPLTIQTSTTAVLYLGDRDVPDPWGGDEEAFTACLRIIEAGAARHLP
Sequences:
>Translated_142_residues MTATPDRLLVVCLGNHCRSPLAEAVLTQKSGGALDVRSAGTAGKWSRRPAHATMTAVAARHGYDLSAHRGQQVTPELLAW ADAVLAMDAKNLTDLKPLTIQTSTTAVLYLGDRDVPDPWGGDEEAFTACLRIIEAGAARHLP >Mature_141_residues TATPDRLLVVCLGNHCRSPLAEAVLTQKSGGALDVRSAGTAGKWSRRPAHATMTAVAARHGYDLSAHRGQQVTPELLAWA DAVLAMDAKNLTDLKPLTIQTSTTAVLYLGDRDVPDPWGGDEEAFTACLRIIEAGAARHLP
Specific function: May be involved in assembly or function of the EPS I polymerization/export complex and/or the epsB ATPase. Alternatively it may function in the removal of the terminal phosphate from C55-isoprenyl pyrophosphate in order to recycle the C55-isoprenyl phosph
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI87081812, Length=132, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1788375, Length=135, Percent_Identity=31.8518518518519, Blast_Score=67, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 15082; Mature: 14951
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPDRLLVVCLGNHCRSPLAEAVLTQKSGGALDVRSAGTAGKWSRRPAHATMTAVAAR CCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH HGYDLSAHRGQQVTPELLAWADAVLAMDAKNLTDLKPLTIQTSTTAVLYLGDRDVPDPWG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCC GDEEAFTACLRIIEAGAARHLP CCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TATPDRLLVVCLGNHCRSPLAEAVLTQKSGGALDVRSAGTAGKWSRRPAHATMTAVAAR CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH HGYDLSAHRGQQVTPELLAWADAVLAMDAKNLTDLKPLTIQTSTTAVLYLGDRDVPDPWG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCC GDEEAFTACLRIIEAGAARHLP CCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]