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The map label for this gene is arnB [H]

Identifier: 158318030

GI number: 158318030

Start: 7639305

End: 7640456

Strand: Direct

Name: arnB [H]

Synonym: Franean1_6290

Alternate gene names: 158318030

Gene position: 7639305-7640456 (Clockwise)

Preceding gene: 158318029

Following gene: 158318031

Centisome position: 85.05

GC content: 72.4

Gene sequence:

>1152_bases
ATGACCAGCACGCTGTCCCCGCCCCGGGCCGGGGTCGAGGCCAACGCCCGCCCCTATCTGCACGGCCCCGAAACCGACGC
CCTCACCGCCGTCCTGCTGTCCGGTCAGTACACCCACGGGCCCGAAACCGAAGCGTTCGAGACCGAGCTGGCCGCCTTCC
TTGGGGTGCCCGACGTCGTCTGTGTCGCGACCGGCACCGCCGCCCTCCACCTGGGACTCCTGGCGGCCGGAGTCGGGCCG
GGACACGAGGTGATCGTCCCGTCGCTGACGTTCGCCGCCAGCGTCCAGGCGATCCGCGCCACCGGAGCCACCCCGCGCTT
CGTCGACATCGACCCCGCCACCCTGTGCATCCGCGACGACCACATCCGCGCCGCCCTCACCCCCGCGACCAAGGCCGTCA
TGCCCGTCCTGTACGGCGGCCGGGCCGTCCCCCTCCCCGGCATCCGTGCCGAGCTGGACCGGCGCGACGTCGCGGTCGTC
GAGGACGCCGCCCACGCCTTCGGCTCACGCCAAGACGGTGTCCGGGTCGGTGCGGCAGGGGCGTTGACCTGCTTCAGCTT
CGACCCGATCAAGAACATCACCTGCGGCGACGGTGGCGCCGTCATCCCCCGCACCCCCGCCGAAGCCGACCAGCTGCGCA
CGCTGCGGCTGCTGGGTATCACCGCCACCCCCAGCGACCGGGCCACCGTGACCACCTACATCGTCGAGGGCCCCGGGTTC
CGGACTCACCTGTCCGCGCTCAACGCCGCCGTTGGGCGGGTCCAGCTCGCCCATTTCGCCGAGATCGCCAAGCGCCGCAT
CGGCCTGTGGCACGCCTACAACGACGCCCTCGCCGGCGTGGGCGGTGTCACGGTCGTGGACGTCGACATCCTGAACACGG
TGCCGTTCCACTTCGTCGTTCAGATCCCCGACCGCGACCGTGTCTTCCATAGGCTGCGCGCCGCCGGGATCGGGGTCGGC
GCCCCCTACCCGCCTAACCATCTCCAGCCCGCTTTTACCCCCTGGCGCACCCCGCTCCCGGCCACCGAGCAGGCCGCGGC
ACGGATCCTCAGCCTGCCGTTCCACCCCGCCCTCACCCCCGGCGACGTCCAGCACGTCACAGACCTCCTGGACCAGGCGC
TTACAGACGCCCGGCCCCGGGCCGACGGGTGA

Upstream 100 bases:

>100_bases
TCGCAGGCCGCCCTGTCGACCACGGCCGGCTCACCTACAAGGCCGGGGTCCGGCTCACCACCGCCCCGGCCACCCTCGCG
ATCGAGGAGACCGACACCCC

Downstream 100 bases:

>100_bases
CCGCCACACCGGATCGGCTGCTGGTGGTCTGCCTGGGTAACCACTGCCGGTCCCCGCTCGCCGAAGCCGTCCTCACCCAG
AAGTCGGGTGGGGCCTTGGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTSTLSPPRAGVEANARPYLHGPETDALTAVLLSGQYTHGPETEAFETELAAFLGVPDVVCVATGTAALHLGLLAAGVGP
GHEVIVPSLTFAASVQAIRATGATPRFVDIDPATLCIRDDHIRAALTPATKAVMPVLYGGRAVPLPGIRAELDRRDVAVV
EDAAHAFGSRQDGVRVGAAGALTCFSFDPIKNITCGDGGAVIPRTPAEADQLRTLRLLGITATPSDRATVTTYIVEGPGF
RTHLSALNAAVGRVQLAHFAEIAKRRIGLWHAYNDALAGVGGVTVVDVDILNTVPFHFVVQIPDRDRVFHRLRAAGIGVG
APYPPNHLQPAFTPWRTPLPATEQAAARILSLPFHPALTPGDVQHVTDLLDQALTDARPRADG

Sequences:

>Translated_383_residues
MTSTLSPPRAGVEANARPYLHGPETDALTAVLLSGQYTHGPETEAFETELAAFLGVPDVVCVATGTAALHLGLLAAGVGP
GHEVIVPSLTFAASVQAIRATGATPRFVDIDPATLCIRDDHIRAALTPATKAVMPVLYGGRAVPLPGIRAELDRRDVAVV
EDAAHAFGSRQDGVRVGAAGALTCFSFDPIKNITCGDGGAVIPRTPAEADQLRTLRLLGITATPSDRATVTTYIVEGPGF
RTHLSALNAAVGRVQLAHFAEIAKRRIGLWHAYNDALAGVGGVTVVDVDILNTVPFHFVVQIPDRDRVFHRLRAAGIGVG
APYPPNHLQPAFTPWRTPLPATEQAAARILSLPFHPALTPGDVQHVTDLLDQALTDARPRADG
>Mature_382_residues
TSTLSPPRAGVEANARPYLHGPETDALTAVLLSGQYTHGPETEAFETELAAFLGVPDVVCVATGTAALHLGLLAAGVGPG
HEVIVPSLTFAASVQAIRATGATPRFVDIDPATLCIRDDHIRAALTPATKAVMPVLYGGRAVPLPGIRAELDRRDVAVVE
DAAHAFGSRQDGVRVGAAGALTCFSFDPIKNITCGDGGAVIPRTPAEADQLRTLRLLGITATPSDRATVTTYIVEGPGFR
THLSALNAAVGRVQLAHFAEIAKRRIGLWHAYNDALAGVGGVTVVDVDILNTVPFHFVVQIPDRDRVFHRLRAAGIGVGA
PYPPNHLQPAFTPWRTPLPATEQAAARILSLPFHPALTPGDVQHVTDLLDQALTDARPRADG

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=384, Percent_Identity=33.59375, Blast_Score=191, Evalue=8e-50,
Organism=Escherichia coli, GI2367285, Length=351, Percent_Identity=31.0541310541311, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 40246; Mature: 40115

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTLSPPRAGVEANARPYLHGPETDALTAVLLSGQYTHGPETEAFETELAAFLGVPDVV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCEE
CVATGTAALHLGLLAAGVGPGHEVIVPSLTFAASVQAIRATGATPRFVDIDPATLCIRDD
EEECCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECC
HIRAALTPATKAVMPVLYGGRAVPLPGIRAELDRRDVAVVEDAAHAFGSRQDGVRVGAAG
CCEEEECCHHHHHHHHHCCCEECCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCC
ALTCFSFDPIKNITCGDGGAVIPRTPAEADQLRTLRLLGITATPSDRATVTTYIVEGPGF
EEEEEECCCCCCCCCCCCCEECCCCCCCHHHHEEEEEEEEEECCCCCCEEEEEEEECCCH
RTHLSALNAAVGRVQLAHFAEIAKRRIGLWHAYNDALAGVGGVTVVDVDILNTVPFHFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCEEEEE
QIPDRDRVFHRLRAAGIGVGAPYPPNHLQPAFTPWRTPLPATEQAAARILSLPFHPALTP
EECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
GDVQHVTDLLDQALTDARPRADG
CHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TSTLSPPRAGVEANARPYLHGPETDALTAVLLSGQYTHGPETEAFETELAAFLGVPDVV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCEE
CVATGTAALHLGLLAAGVGPGHEVIVPSLTFAASVQAIRATGATPRFVDIDPATLCIRDD
EEECCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECC
HIRAALTPATKAVMPVLYGGRAVPLPGIRAELDRRDVAVVEDAAHAFGSRQDGVRVGAAG
CCEEEECCHHHHHHHHHCCCEECCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCC
ALTCFSFDPIKNITCGDGGAVIPRTPAEADQLRTLRLLGITATPSDRATVTTYIVEGPGF
EEEEEECCCCCCCCCCCCCEECCCCCCCHHHHEEEEEEEEEECCCCCCEEEEEEEECCCH
RTHLSALNAAVGRVQLAHFAEIAKRRIGLWHAYNDALAGVGGVTVVDVDILNTVPFHFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCEEEEE
QIPDRDRVFHRLRAAGIGVGAPYPPNHLQPAFTPWRTPLPATEQAAARILSLPFHPALTP
EECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
GDVQHVTDLLDQALTDARPRADG
CHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA