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The map label for this gene is yjcF [C]

Identifier: 158318001

GI number: 158318001

Start: 7605861

End: 7607162

Strand: Direct

Name: yjcF [C]

Synonym: Franean1_6261

Alternate gene names: 158318001

Gene position: 7605861-7607162 (Clockwise)

Preceding gene: 158318000

Following gene: 158318002

Centisome position: 84.68

GC content: 72.58

Gene sequence:

>1302_bases
ATGGTCGACAACGGGGGAGCAGGCCGGCGAACCGCCCGGCGCTGGCTGTGGATCATCGCCGGGATTGCAGCGGCTGGAGC
GGTGTGCGCGGTGGTCGGGATCTGGCACCTGCCCGCACGGATGTACCCGGACGCTGGCGACGCTGACGCGCGGGCAGCAC
TGCAGAGCGGACTGCTCACCGCCGCCGCTGCGCTCACCGCCGTAGCTGGCGGGCTCATCGCCCTCGACGAAACCCGCCAA
GCCAACGCCGAGGTACGGCGGGCGAACGCCGAGGTACGACGGGCGAACGAGAACACCCATGTGCGGGAGCTGTACGTAGA
GGCAGTGAAGCTCCTCAACGACACCGAGCGAGGGATCCGCCTGGCCGGGATCTACGCCTTGGAACGCATCGCGGTGGACT
CCCCGGCTGACCAGCGCACGGTGGTGGAGGTGCTGTCGGCGTTCGTGCGTGACCGCAGCACCGACCCCGCCCTACGTCTG
CCTCCAACACCTGGCGAGGACGGCACGGTCCCGCCGGTACGGGCCGTGGCGGACATCCGCGCCGCCGTCCAGGTCCTGGC
CCGGCTCCCGGTCCGCAAGGGCATCCCGCGTTCCGACCTGACCGGCGCCACTCTCACCGGACCGGCCAGCCTCGCCCACC
TCACCCTCACCAACGCCAACCTCACCGGCGCGCGGCTAGACGGCGCGGACCTCGCCGGCGTCCGGCTGGACGGGGCGAGC
CTCACCGGCGCCGTGCTGCTCGGCGCGACCCTCACCTTGGCCTCGCTGGACGGGTCGGACCTCACCGACGCCGGGCTGGA
CGGGGCGAGCCTCACCCACGCCCATCTGAACAGAGCGGACCTCACCGGCGCCACGCTGAACGGGGCGGACCTCACCTGGG
CCCAGCTGAATGGCGCGGACCTCACCCGCGCCCAGCTGAACGTGGATGTGTCCCTTACCCACGCCTCGCTGCGCGGTGCG
ACCCTCACCGGCGCCGAGCTGTCCGGCGCGAGCCTCACCAGCGCCACGCTGGACGGGACGGACCTCACAGACGCCACGCT
GGACGGCGCGGACCTGACCGACGCCACGCTGAATGGCGCGGACCTCACTCGCGCCTCGCTATTCCTCGCGACCCTCACCG
GCGCCTCGCTGGACGGCGCGACCCTCACCCACGCCCGGCTGGGCTGCGCGACCCTCACCGGCGCCTTTGGGCTGTCGCAG
GGACAGGTGGATGCCACGCAGGGGGATGAGCGGACACGGTTGCCGGAGGGTCTGGTCCGGCCGGCGTCATGGCCTCCAGA
GGAGCCGCCGGACGGCGGCTGA

Upstream 100 bases:

>100_bases
GCAGGGGCGGGGACGGCATGTTCTCGTGGCTTCCTGTGGATAACAGCAAAGCGGGCCCCTACCCGGGTAGGTGGGAATCC
GCTGGCGTACAACCATTCTC

Downstream 100 bases:

>100_bases
ATGAGACGCCAGCCGGGGCCCCTACCCGGGTGGGTAGGGGCCCGCTGACGTACAACCTTGGTCATGGTCGACAACGGGGA
AGCACGCCGTCGGGCTGGTC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MVDNGGAGRRTARRWLWIIAGIAAAGAVCAVVGIWHLPARMYPDAGDADARAALQSGLLTAAAALTAVAGGLIALDETRQ
ANAEVRRANAEVRRANENTHVRELYVEAVKLLNDTERGIRLAGIYALERIAVDSPADQRTVVEVLSAFVRDRSTDPALRL
PPTPGEDGTVPPVRAVADIRAAVQVLARLPVRKGIPRSDLTGATLTGPASLAHLTLTNANLTGARLDGADLAGVRLDGAS
LTGAVLLGATLTLASLDGSDLTDAGLDGASLTHAHLNRADLTGATLNGADLTWAQLNGADLTRAQLNVDVSLTHASLRGA
TLTGAELSGASLTSATLDGTDLTDATLDGADLTDATLNGADLTRASLFLATLTGASLDGATLTHARLGCATLTGAFGLSQ
GQVDATQGDERTRLPEGLVRPASWPPEEPPDGG

Sequences:

>Translated_433_residues
MVDNGGAGRRTARRWLWIIAGIAAAGAVCAVVGIWHLPARMYPDAGDADARAALQSGLLTAAAALTAVAGGLIALDETRQ
ANAEVRRANAEVRRANENTHVRELYVEAVKLLNDTERGIRLAGIYALERIAVDSPADQRTVVEVLSAFVRDRSTDPALRL
PPTPGEDGTVPPVRAVADIRAAVQVLARLPVRKGIPRSDLTGATLTGPASLAHLTLTNANLTGARLDGADLAGVRLDGAS
LTGAVLLGATLTLASLDGSDLTDAGLDGASLTHAHLNRADLTGATLNGADLTWAQLNGADLTRAQLNVDVSLTHASLRGA
TLTGAELSGASLTSATLDGTDLTDATLDGADLTDATLNGADLTRASLFLATLTGASLDGATLTHARLGCATLTGAFGLSQ
GQVDATQGDERTRLPEGLVRPASWPPEEPPDGG
>Mature_433_residues
MVDNGGAGRRTARRWLWIIAGIAAAGAVCAVVGIWHLPARMYPDAGDADARAALQSGLLTAAAALTAVAGGLIALDETRQ
ANAEVRRANAEVRRANENTHVRELYVEAVKLLNDTERGIRLAGIYALERIAVDSPADQRTVVEVLSAFVRDRSTDPALRL
PPTPGEDGTVPPVRAVADIRAAVQVLARLPVRKGIPRSDLTGATLTGPASLAHLTLTNANLTGARLDGADLAGVRLDGAS
LTGAVLLGATLTLASLDGSDLTDAGLDGASLTHAHLNRADLTGATLNGADLTWAQLNGADLTRAQLNVDVSLTHASLRGA
TLTGAELSGASLTSATLDGTDLTDATLDGADLTDATLNGADLTRASLFLATLTGASLDGATLTHARLGCATLTGAFGLSQ
GQVDATQGDERTRLPEGLVRPASWPPEEPPDGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=166, Percent_Identity=34.9397590361446, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221377802, Length=190, Percent_Identity=30, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 44348; Mature: 44348

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNGGAGRRTARRWLWIIAGIAAAGAVCAVVGIWHLPARMYPDAGDADARAALQSGLLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHH
AAAALTAVAGGLIALDETRQANAEVRRANAEVRRANENTHVRELYVEAVKLLNDTERGIR
HHHHHHHHHCCEEEECCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCHHCCEE
LAGIYALERIAVDSPADQRTVVEVLSAFVRDRSTDPALRLPPTPGEDGTVPPVRAVADIR
EEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHH
AAVQVLARLPVRKGIPRSDLTGATLTGPASLAHLTLTNANLTGARLDGADLAGVRLDGAS
HHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC
LTGAVLLGATLTLASLDGSDLTDAGLDGASLTHAHLNRADLTGATLNGADLTWAQLNGAD
HHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHCCHHHCCCCEECCCCEEEEECCCCC
LTRAQLNVDVSLTHASLRGATLTGAELSGASLTSATLDGTDLTDATLDGADLTDATLNGA
EEEEEEEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DLTRASLFLATLTGASLDGATLTHARLGCATLTGAFGLSQGQVDATQGDERTRLPEGLVR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHCC
PASWPPEEPPDGG
CCCCCCCCCCCCC
>Mature Secondary Structure
MVDNGGAGRRTARRWLWIIAGIAAAGAVCAVVGIWHLPARMYPDAGDADARAALQSGLLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHH
AAAALTAVAGGLIALDETRQANAEVRRANAEVRRANENTHVRELYVEAVKLLNDTERGIR
HHHHHHHHHCCEEEECCCHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHCCHHCCEE
LAGIYALERIAVDSPADQRTVVEVLSAFVRDRSTDPALRLPPTPGEDGTVPPVRAVADIR
EEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHH
AAVQVLARLPVRKGIPRSDLTGATLTGPASLAHLTLTNANLTGARLDGADLAGVRLDGAS
HHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCC
LTGAVLLGATLTLASLDGSDLTDAGLDGASLTHAHLNRADLTGATLNGADLTWAQLNGAD
HHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHCCHHHCCCCEECCCCEEEEECCCCC
LTRAQLNVDVSLTHASLRGATLTGAELSGASLTSATLDGTDLTDATLDGADLTDATLNGA
EEEEEEEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DLTRASLFLATLTGASLDGATLTHARLGCATLTGAFGLSQGQVDATQGDERTRLPEGLVR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHCC
PASWPPEEPPDGG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA