Click here to switch to the map view.

The map label for this gene is 158318002

Identifier: 158318002

GI number: 158318002

Start: 7607226

End: 7608452

Strand: Direct

Name: 158318002

Synonym: Franean1_6262

Alternate gene names: NA

Gene position: 7607226-7608452 (Clockwise)

Preceding gene: 158318001

Following gene: 158318005

Centisome position: 84.69

GC content: 63.0

Gene sequence:

>1227_bases
ATGGTCGACAACGGGGAAGCACGCCGTCGGGCTGGTCGGCGCGGGCTGTGGATCGTCGCCGGGATCGCCGCGGTGGGGGC
AGTCTGCGCGGTGGTGGGGATCTGGCACCTGCCGGACCGGATGTACCCGCCAGGAACCGACGGTGGGGCGGAAGCACGAG
CCGCGTTGCAGGGCGGGCTACTCACGGCGGCGGCTGCGCTCACCGCCGTGGCTGGCGGTCTGATTGCCTTGGACGAGACC
CGGCGGGCCAACGCCGAAGTGCGGCAGGCCAATGCCAACACCCACGTCCGCGAGCTCTACACGGCCGCGATAGGGCTGCT
GAGCTCGGATGCGATCGACAGTCGGCTAGGTGGGATCTACGCCCTCGAACGGATTGCGTGGGATAGTCCTGCCGACCAGT
CCACTGTCGTCGAGGTCCTCTCCGCGTTTGTCCGCGAGCACGCCCGACCCCTCACAGATGCGCCGGCCGGCCTCCCGGCC
GAGATTCGGGGCCGAGGTGGTGGGGGTCTGCGCAGTCGACGTCGTCGTGGTCACGCCGCTGGCAGGAGGTCGGAGGTCCG
CCACCGGCTACCGCCCTGGGATCGATTTATCCAGATAGGCCCATGGAGTAACGAGGCTCCGCCACCCACTGATGTGCAGG
CGGCTCTTACCGTCCTAGGACGTCTACCCGACCTCGGAGGCTTTCGCGCCGACCTCACCGGAGCGAATCTTACCGGTGCC
GAGCTAGAAGGCGCGAATCTCTTTCCCGCACGGCTGACTAGGGCCACTTTTACCGGATCACACCTAGGCAGGGTAAACCT
TAAGTACGCCCAGTTGTACTTGACAAATTTCACCGATGCCACCATAAATTCCATAAACTTTACCCGCGCACAAATACAAA
ATACAAACTTTACGGGCACGCTAATGATGGGTGCAGACTTTAGTGAAGCACTGATCTCCGACGCAGATTTCACCGACGCC
TTCCTGACTGCAACGGTTCTCACCGACGCTATAATAAGCGCAAACTTCACGCGCGCATTTATTGTGGAAGTGGATTTCTC
CGGATTAAATATCGGCGGGATAAACCTCACCGATGCTCGACTGCAAGCAGTGAATTTCTCCGGCGCTAAAGGTCTTACAC
AGGAACAGGTGGATAGCGCCCAGGGCGACGGGCGGACGCGGTTGCCGGCGGGTCTGGTGCGGCCGGCGTCGTGGGGTCCG
GAGGAGCCGCCAGTCGGGGGCGGCTGA

Upstream 100 bases:

>100_bases
GTCATGGCCTCCAGAGGAGCCGCCGGACGGCGGCTGAATGAGACGCCAGCCGGGGCCCCTACCCGGGTGGGTAGGGGCCC
GCTGACGTACAACCTTGGTC

Downstream 100 bases:

>100_bases
CGTCAGCAGGGCCCCTACCCCGGGGTGGGGACCGCTTCGCGTTGCTGGGGGCTACCGGGTGACCGTGAACGGTGCGCCGG
CTGCCTGCGCGCGTCGGACG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; Pentapeptide Repeat Family Protein; RDD Domain Containing Protein; LigA Protein; Signal Peptide Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MVDNGEARRRAGRRGLWIVAGIAAVGAVCAVVGIWHLPDRMYPPGTDGGAEARAALQGGLLTAAAALTAVAGGLIALDET
RRANAEVRQANANTHVRELYTAAIGLLSSDAIDSRLGGIYALERIAWDSPADQSTVVEVLSAFVREHARPLTDAPAGLPA
EIRGRGGGGLRSRRRRGHAAGRRSEVRHRLPPWDRFIQIGPWSNEAPPPTDVQAALTVLGRLPDLGGFRADLTGANLTGA
ELEGANLFPARLTRATFTGSHLGRVNLKYAQLYLTNFTDATINSINFTRAQIQNTNFTGTLMMGADFSEALISDADFTDA
FLTATVLTDAIISANFTRAFIVEVDFSGLNIGGINLTDARLQAVNFSGAKGLTQEQVDSAQGDGRTRLPAGLVRPASWGP
EEPPVGGG

Sequences:

>Translated_408_residues
MVDNGEARRRAGRRGLWIVAGIAAVGAVCAVVGIWHLPDRMYPPGTDGGAEARAALQGGLLTAAAALTAVAGGLIALDET
RRANAEVRQANANTHVRELYTAAIGLLSSDAIDSRLGGIYALERIAWDSPADQSTVVEVLSAFVREHARPLTDAPAGLPA
EIRGRGGGGLRSRRRRGHAAGRRSEVRHRLPPWDRFIQIGPWSNEAPPPTDVQAALTVLGRLPDLGGFRADLTGANLTGA
ELEGANLFPARLTRATFTGSHLGRVNLKYAQLYLTNFTDATINSINFTRAQIQNTNFTGTLMMGADFSEALISDADFTDA
FLTATVLTDAIISANFTRAFIVEVDFSGLNIGGINLTDARLQAVNFSGAKGLTQEQVDSAQGDGRTRLPAGLVRPASWGP
EEPPVGGG
>Mature_408_residues
MVDNGEARRRAGRRGLWIVAGIAAVGAVCAVVGIWHLPDRMYPPGTDGGAEARAALQGGLLTAAAALTAVAGGLIALDET
RRANAEVRQANANTHVRELYTAAIGLLSSDAIDSRLGGIYALERIAWDSPADQSTVVEVLSAFVREHARPLTDAPAGLPA
EIRGRGGGGLRSRRRRGHAAGRRSEVRHRLPPWDRFIQIGPWSNEAPPPTDVQAALTVLGRLPDLGGFRADLTGANLTGA
ELEGANLFPARLTRATFTGSHLGRVNLKYAQLYLTNFTDATINSINFTRAQIQNTNFTGTLMMGADFSEALISDADFTDA
FLTATVLTDAIISANFTRAFIVEVDFSGLNIGGINLTDARLQAVNFSGAKGLTQEQVDSAQGDGRTRLPAGLVRPASWGP
EEPPVGGG

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43092; Mature: 43092

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNGEARRRAGRRGLWIVAGIAAVGAVCAVVGIWHLPDRMYPPGTDGGAEARAALQGGL
CCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCH
LTAAAALTAVAGGLIALDETRRANAEVRQANANTHVRELYTAAIGLLSSDAIDSRLGGIY
HHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALERIAWDSPADQSTVVEVLSAFVREHARPLTDAPAGLPAEIRGRGGGGLRSRRRRGHAA
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCC
GRRSEVRHRLPPWDRFIQIGPWSNEAPPPTDVQAALTVLGRLPDLGGFRADLTGANLTGA
CCHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCC
ELEGANLFPARLTRATFTGSHLGRVNLKYAQLYLTNFTDATINSINFTRAQIQNTNFTGT
CCCCCCCCHHHHHHHEECCCCCCEEEEEEEEEEEECCCCCHHCCCEEEEHEEECCCCEEE
LMMGADFSEALISDADFTDAFLTATVLTDAIISANFTRAFIVEVDFSGLNIGGINLTDAR
EEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCHHH
LQAVNFSGAKGLTQEQVDSAQGDGRTRLPAGLVRPASWGPEEPPVGGG
EEEECCCCCCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVDNGEARRRAGRRGLWIVAGIAAVGAVCAVVGIWHLPDRMYPPGTDGGAEARAALQGGL
CCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCH
LTAAAALTAVAGGLIALDETRRANAEVRQANANTHVRELYTAAIGLLSSDAIDSRLGGIY
HHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALERIAWDSPADQSTVVEVLSAFVREHARPLTDAPAGLPAEIRGRGGGGLRSRRRRGHAA
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCC
GRRSEVRHRLPPWDRFIQIGPWSNEAPPPTDVQAALTVLGRLPDLGGFRADLTGANLTGA
CCHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCC
ELEGANLFPARLTRATFTGSHLGRVNLKYAQLYLTNFTDATINSINFTRAQIQNTNFTGT
CCCCCCCCHHHHHHHEECCCCCCEEEEEEEEEEEECCCCCHHCCCEEEEHEEECCCCEEE
LMMGADFSEALISDADFTDAFLTATVLTDAIISANFTRAFIVEVDFSGLNIGGINLTDAR
EEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCHHH
LQAVNFSGAKGLTQEQVDSAQGDGRTRLPAGLVRPASWGPEEPPVGGG
EEEECCCCCCCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA