Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yhbW [C]

Identifier: 158317979

GI number: 158317979

Start: 7576226

End: 7577434

Strand: Reverse

Name: yhbW [C]

Synonym: Franean1_6239

Alternate gene names: 158317979

Gene position: 7577434-7576226 (Counterclockwise)

Preceding gene: 158317985

Following gene: 158317978

Centisome position: 84.36

GC content: 67.91

Gene sequence:

>1209_bases
ATGGTGGTCACTGTACCAACCATGCCGTTTGCTATAACAAACGAGGCCGCCGTGAAACTGGATCTGCTGTACGAGGTGGA
CGTCCCGAAGCCGTGGTCGAAGCCCCACCCCCACGGGCAGCGCGAGGCCGAGCAGGCCGCCTACCGCGAGGCCATCGCCC
AGATCCGCCTTGCCGACGAGATGGGTTTCCACACCTCCTGGCACGTGGAGCACCACTTCCGTGAGGGGCGGTCCCACTGC
TCGGCGCCCGAGGTCCTCATCGGGGCGCTCTCGCAGGTCACCGAACGGATCCGGCTCGGCTTCGGGGTGACACTGCTGCC
GCACGCGTTCACGTCACCTGTGCGGGTGGCCGAGAAGGTCGCCACGGCCGACGTCCTGAGTAATGGGCGCGTCGAATGGG
GGACGGGCCGCTCGACCCCCATGGAACAGACCGCTTTCGGTGTCGACATCCCGCAGAGCAAGGATCAGGTGCGTGAGGCG
ATCCAGGCCATTGTCGAGGCCTGGGAATCCGAATACTTCTCGTTCGAGGGAAAACACTGGCGATTCCCCGCGGCGGGCGA
CGTCCCCGTCCGCATGGTCACCCCCAAGCCGGTGCAGGATCCGCACCCACCCTGCTGGATGGCGGCGTCGAGCACGGGCA
GCGCCCAGGCCGCCGGCGCCATGGGCCTCGGCCTGCTCTCACTGTCGATCATGCGGCCGCTGGAGCAGATGGCGGAGACC
ATCCAGCTCTACCGGCGGGCCGCCGCCGCCGCGCGGCCGATCACCCGCGTGGCCAACAACCGCGTGGCGGCATACACGCT
GGTCCACTGCGCGGACACGATGGCCCAGGCCGAGGCGAACGGGATCTGGGACGCCACCTGGTGGTGGTACAGGAACCTGG
CCGAGTTCACGCTGGAGTGGGAGTTCCCGCACGCCTCCGAGCAGGAGCGGGAGAAGATGTTCCCGATCCTCGAGCAGCGG
CGGAACGCGCCGCCGGATCCGAGGCAGTTCAGCGACGCCGACATGATCATCGTTGGTGATCCCGACGAGTGCCTGCGCAA
GATGCTCCGCTACGCCGAGCTCGGGGTCGACCGGCTGCTCTGCTACGTGCAGTTCGGCCGGCTGTCCCACGAGGCCGTGA
TGCGCACCATCGAGCTCCTCGGCACCCACGTCATCCCCGAGCTCGAACGTCGCGAGGTCCAGGTCTCGACCTCGGTGACC
GCCACCTGA

Upstream 100 bases:

>100_bases
GTAACGACCTGGGAGCGGGGGTGTCAACCGGCTGGGTTAGGGCTGGAGTTCGGGTCGATCTGTCTCCGGCGACCCCGTTG
ACATCGACGGAGCGGCGCTT

Downstream 100 bases:

>100_bases
TCCCGCCGATCCCGATCGCAGGCAGCGGCAGAGACGGAGACAGGAACGATGACACGGTTGGATGAATCGGCGATCCCCGA
CTACCCCGGGCTGCTGCGCC

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MVVTVPTMPFAITNEAAVKLDLLYEVDVPKPWSKPHPHGQREAEQAAYREAIAQIRLADEMGFHTSWHVEHHFREGRSHC
SAPEVLIGALSQVTERIRLGFGVTLLPHAFTSPVRVAEKVATADVLSNGRVEWGTGRSTPMEQTAFGVDIPQSKDQVREA
IQAIVEAWESEYFSFEGKHWRFPAAGDVPVRMVTPKPVQDPHPPCWMAASSTGSAQAAGAMGLGLLSLSIMRPLEQMAET
IQLYRRAAAAARPITRVANNRVAAYTLVHCADTMAQAEANGIWDATWWWYRNLAEFTLEWEFPHASEQEREKMFPILEQR
RNAPPDPRQFSDADMIIVGDPDECLRKMLRYAELGVDRLLCYVQFGRLSHEAVMRTIELLGTHVIPELERREVQVSTSVT
AT

Sequences:

>Translated_402_residues
MVVTVPTMPFAITNEAAVKLDLLYEVDVPKPWSKPHPHGQREAEQAAYREAIAQIRLADEMGFHTSWHVEHHFREGRSHC
SAPEVLIGALSQVTERIRLGFGVTLLPHAFTSPVRVAEKVATADVLSNGRVEWGTGRSTPMEQTAFGVDIPQSKDQVREA
IQAIVEAWESEYFSFEGKHWRFPAAGDVPVRMVTPKPVQDPHPPCWMAASSTGSAQAAGAMGLGLLSLSIMRPLEQMAET
IQLYRRAAAAARPITRVANNRVAAYTLVHCADTMAQAEANGIWDATWWWYRNLAEFTLEWEFPHASEQEREKMFPILEQR
RNAPPDPRQFSDADMIIVGDPDECLRKMLRYAELGVDRLLCYVQFGRLSHEAVMRTIELLGTHVIPELERREVQVSTSVT
AT
>Mature_402_residues
MVVTVPTMPFAITNEAAVKLDLLYEVDVPKPWSKPHPHGQREAEQAAYREAIAQIRLADEMGFHTSWHVEHHFREGRSHC
SAPEVLIGALSQVTERIRLGFGVTLLPHAFTSPVRVAEKVATADVLSNGRVEWGTGRSTPMEQTAFGVDIPQSKDQVREA
IQAIVEAWESEYFSFEGKHWRFPAAGDVPVRMVTPKPVQDPHPPCWMAASSTGSAQAAGAMGLGLLSLSIMRPLEQMAET
IQLYRRAAAAARPITRVANNRVAAYTLVHCADTMAQAEANGIWDATWWWYRNLAEFTLEWEFPHASEQEREKMFPILEQR
RNAPPDPRQFSDADMIIVGDPDECLRKMLRYAELGVDRLLCYVQFGRLSHEAVMRTIELLGTHVIPELERREVQVSTSVT
AT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=237, Percent_Identity=29.1139240506329, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 45130; Mature: 45130

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTVPTMPFAITNEAAVKLDLLYEVDVPKPWSKPHPHGQREAEQAAYREAIAQIRLADE
CEEEECCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGFHTSWHVEHHFREGRSHCSAPEVLIGALSQVTERIRLGFGVTLLPHAFTSPVRVAEKV
CCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCHHHCCHHHHHHHH
ATADVLSNGRVEWGTGRSTPMEQTAFGVDIPQSKDQVREAIQAIVEAWESEYFSFEGKHW
HHHHHHHCCCEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
RFPAAGDVPVRMVTPKPVQDPHPPCWMAASSTGSAQAAGAMGLGLLSLSIMRPLEQMAET
ECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IQLYRRAAAAARPITRVANNRVAAYTLVHCADTMAQAEANGIWDATWWWYRNLAEFTLEW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEE
EFPHASEQEREKMFPILEQRRNAPPDPRQFSDADMIIVGDPDECLRKMLRYAELGVDRLL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHH
CYVQFGRLSHEAVMRTIELLGTHVIPELERREVQVSTSVTAT
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCC
>Mature Secondary Structure
MVVTVPTMPFAITNEAAVKLDLLYEVDVPKPWSKPHPHGQREAEQAAYREAIAQIRLADE
CEEEECCCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGFHTSWHVEHHFREGRSHCSAPEVLIGALSQVTERIRLGFGVTLLPHAFTSPVRVAEKV
CCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCHHHCCHHHHHHHH
ATADVLSNGRVEWGTGRSTPMEQTAFGVDIPQSKDQVREAIQAIVEAWESEYFSFEGKHW
HHHHHHHCCCEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
RFPAAGDVPVRMVTPKPVQDPHPPCWMAASSTGSAQAAGAMGLGLLSLSIMRPLEQMAET
ECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IQLYRRAAAAARPITRVANNRVAAYTLVHCADTMAQAEANGIWDATWWWYRNLAEFTLEW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEE
EFPHASEQEREKMFPILEQRRNAPPDPRQFSDADMIIVGDPDECLRKMLRYAELGVDRLL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHH
CYVQFGRLSHEAVMRTIELLGTHVIPELERREVQVSTSVTAT
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]