BacMap

Definition	Frankia sp. EAN1pec chromosome, complete genome.
Accession	NC_009921
Length	8,982,042

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 158317977

GI number: 158317977

Start: 7574460

End: 7575308

Strand: Reverse

Name: fabG [H]

Synonym: Franean1_6237

Alternate gene names: 158317977

Gene position: 7575308-7574460 (Counterclockwise)

Preceding gene: 158317978

Following gene: 158317976

Centisome position: 84.34

GC content: 74.09

Gene sequence:

>849_bases
ATGACCCGGGACGGGGCGGCCCTCGAGGAGGACGGACGCGCGGAGCCGGTCAGGGCGCTGGGCCGGGCGTTCGACCTCAC
CGGCCGGGTGGCGATCGTGACCGGAGCGGGCCACGGCATCGGCCGGGGGGTCGCCCGGGTGCTGGCGGCGGCCGGCGCCA
CCGTGCTGTGCGCGGACGTCGACGCCGGGGCCGCGGCGGCGACGAGCGCGGAGATCGCCGCCGGCGGCGGGTCGGCCGCG
CCGGCCGCCGTCGACGTGTCGCGCCGCGACCAGGTCGTGGACCTGGTGCGTTCGGCGGTGTCGGACCACGGGCGGGTCGA
CGTGATGTGCAACAACGCCGGGATCATCATCGACGTCCCGGTGCTCGATCTGTCCGAGGAACAGCTCGACCGGGTGCTGG
CCGTCAACCTCAAGGGCGTGCTGTTCGGGTGCCAGGCGGCCGGGGCCGTGATGCGGAGCCAGCGGGCGGGCAGCATCATC
AACATGGCGTCGGGTGCGTTCGACACCGCCCCCGCCCGCCTGGTGGCCTACTCGATCTCGAAGGCGGGGGTGGTCCAGAT
CACTCGTACGCTGGCGAAGGAGCTGGGCCCGGACGGGGTCCGGGTGAACGCCATCGCGCCGGGTCTGGTCGAGACCGACA
TCACGCGCCGCCACTACGCCGCCGAGGACGGGACCGTCGATGAGGACAAGCGCGAAAGATTCCTGGGACGGAGCCGGGAT
CTGGCGCCGCTGCGGCGCATCGGGACGACGGAGGACATCGGCCACGCCGCGCTGTACCTGGCCTCCGAAGCCGCCCGGTT
CGTCACGGGCCAGGTCCTGCGGCCCAACGGCGGCGCGGCGATGCCATGA

Upstream 100 bases:

>100_bases
CCGCCCGCTTCGCCTACATGGGCTCCGGGCTGTCGTCGACGGCGCCGGCTGCTCCGACGACGTCGCCCCCGGCGGTGCCG
CCCTCGACGGCCACGCCGTC

Downstream 100 bases:

>100_bases
CGTGACCGCGCGGCGCAGGCCCGCCTGATGCCGCGGCCCGCCCCGGGGGCCGAGCGGACCGTCGCGCTCATCACCTTCCT
GAGCCAGCATCCCGGCCGGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTRDGAALEEDGRAEPVRALGRAFDLTGRVAIVTGAGHGIGRGVARVLAAAGATVLCADVDAGAAAATSAEIAAGGGSAA
PAAVDVSRRDQVVDLVRSAVSDHGRVDVMCNNAGIIIDVPVLDLSEEQLDRVLAVNLKGVLFGCQAAGAVMRSQRAGSII
NMASGAFDTAPARLVAYSISKAGVVQITRTLAKELGPDGVRVNAIAPGLVETDITRRHYAAEDGTVDEDKRERFLGRSRD
LAPLRRIGTTEDIGHAALYLASEAARFVTGQVLRPNGGAAMP

Sequences:

>Translated_282_residues
MTRDGAALEEDGRAEPVRALGRAFDLTGRVAIVTGAGHGIGRGVARVLAAAGATVLCADVDAGAAAATSAEIAAGGGSAA
PAAVDVSRRDQVVDLVRSAVSDHGRVDVMCNNAGIIIDVPVLDLSEEQLDRVLAVNLKGVLFGCQAAGAVMRSQRAGSII
NMASGAFDTAPARLVAYSISKAGVVQITRTLAKELGPDGVRVNAIAPGLVETDITRRHYAAEDGTVDEDKRERFLGRSRD
LAPLRRIGTTEDIGHAALYLASEAARFVTGQVLRPNGGAAMP
>Mature_281_residues
TRDGAALEEDGRAEPVRALGRAFDLTGRVAIVTGAGHGIGRGVARVLAAAGATVLCADVDAGAAAATSAEIAAGGGSAAP
AAVDVSRRDQVVDLVRSAVSDHGRVDVMCNNAGIIIDVPVLDLSEEQLDRVLAVNLKGVLFGCQAAGAVMRSQRAGSIIN
MASGAFDTAPARLVAYSISKAGVVQITRTLAKELGPDGVRVNAIAPGLVETDITRRHYAAEDGTVDEDKRERFLGRSRDL
APLRRIGTTEDIGHAALYLASEAARFVTGQVLRPNGGAAMP

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=263, Percent_Identity=33.8403041825095, Blast_Score=118, Evalue=5e-27,
Organism=Homo sapiens, GI19923817, Length=264, Percent_Identity=27.6515151515151, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=30.5882352941176, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI40254992, Length=255, Percent_Identity=31.7647058823529, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI7705925, Length=260, Percent_Identity=31.1538461538462, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=29.8449612403101, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=35.2040816326531, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=28.7937743190661, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI66933014, Length=257, Percent_Identity=29.9610894941634, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI142976729, Length=196, Percent_Identity=26.530612244898, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI210032110, Length=192, Percent_Identity=27.6041666666667, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI33667109, Length=250, Percent_Identity=29.6, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI59889578, Length=244, Percent_Identity=32.3770491803279, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=33.502538071066, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI40254986, Length=195, Percent_Identity=30.2564102564103, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4758504, Length=269, Percent_Identity=29.7397769516729, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4503301, Length=280, Percent_Identity=26.0714285714286, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI209862901, Length=206, Percent_Identity=29.126213592233, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI19923983, Length=206, Percent_Identity=29.126213592233, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI109715829, Length=256, Percent_Identity=28.125, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI126723191, Length=208, Percent_Identity=28.3653846153846, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI226371731, Length=191, Percent_Identity=27.2251308900524, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI25282469, Length=219, Percent_Identity=26.9406392694064, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI186928839, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787335, Length=258, Percent_Identity=31.7829457364341, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=33.852140077821, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787905, Length=257, Percent_Identity=33.4630350194552, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI87082100, Length=261, Percent_Identity=31.8007662835249, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=30.5882352941176, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=31.9066147859922, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=31.3953488372093, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI2367175, Length=256, Percent_Identity=32.03125, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=29.7619047619048, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=29.8804780876494, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1789057, Length=261, Percent_Identity=29.5019157088123, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=27.2357723577236, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787820, Length=239, Percent_Identity=25.9414225941423, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=274, Percent_Identity=32.8467153284672, Blast_Score=131, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25147288, Length=258, Percent_Identity=36.8217054263566, Blast_Score=127, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=34.3873517786561, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=32.5396825396825, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI115534694, Length=257, Percent_Identity=31.5175097276265, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=29.7397769516729, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=259, Percent_Identity=27.4131274131274, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=27.2388059701493, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.0566037735849, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=28.957528957529, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=27.5092936802974, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17508895, Length=204, Percent_Identity=28.921568627451, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=27.9245283018868, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17564282, Length=188, Percent_Identity=28.1914893617021, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.4046692607004, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=267, Percent_Identity=27.7153558052434, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=270, Percent_Identity=30.3703703703704, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=29.0566037735849, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=26.1363636363636, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=28.1954887218045, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193203115, Length=202, Percent_Identity=30.6930693069307, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=30.2083333333333, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=26.4925373134328, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=28.7878787878788, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=26.0700389105058, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=28.8389513108614, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=28.3582089552239, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=27.1375464684015, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=27.1375464684015, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=280, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17555612, Length=222, Percent_Identity=30.1801801801802, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982365, Length=195, Percent_Identity=28.2051282051282, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=26.4925373134328, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=259, Percent_Identity=26.6409266409266, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=28.3524904214559, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71997099, Length=211, Percent_Identity=30.3317535545024, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17567345, Length=188, Percent_Identity=27.6595744680851, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17558628, Length=192, Percent_Identity=27.6041666666667, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=188, Percent_Identity=36.1702127659575, Blast_Score=100, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=29.8449612403101, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6322067, Length=231, Percent_Identity=30.7359307359307, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=35.3174603174603, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=34.5098039215686, Blast_Score=127, Evalue=9e-30,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=34.6613545816733, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=33.984375, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=32.5581395348837, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=29.9212598425197, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24640492, Length=197, Percent_Identity=30.4568527918782, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24644337, Length=259, Percent_Identity=32.4324324324324, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI281364892, Length=199, Percent_Identity=34.6733668341709, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=31.5175097276265, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI18859837, Length=192, Percent_Identity=34.8958333333333, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI17737361, Length=265, Percent_Identity=28.6792452830189, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28573296, Length=204, Percent_Identity=30.3921568627451, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24649181, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571387, Length=210, Percent_Identity=30.952380952381, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19921754, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI22024069, Length=206, Percent_Identity=30.0970873786408, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161076371, Length=206, Percent_Identity=28.6407766990291, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 28956; Mature: 28825

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDGAALEEDGRAEPVRALGRAFDLTGRVAIVTGAGHGIGRGVARVLAAAGATVLCADV
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
DAGAAAATSAEIAAGGGSAAPAAVDVSRRDQVVDLVRSAVSDHGRVDVMCNNAGIIIDVP
CCCCCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEC
VLDLSEEQLDRVLAVNLKGVLFGCQAAGAVMRSQRAGSIINMASGAFDTAPARLVAYSIS
CCCCCHHHHHHHHHEEHHHEEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHEEEECC
KAGVVQITRTLAKELGPDGVRVNAIAPGLVETDITRRHYAAEDGTVDEDKRERFLGRSRD
CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCHHHHHHCCCCCCCCHHHHHHHHCCCCC
LAPLRRIGTTEDIGHAALYLASEAARFVTGQVLRPNGGAAMP
CHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
>Mature Secondary Structure 
TRDGAALEEDGRAEPVRALGRAFDLTGRVAIVTGAGHGIGRGVARVLAAAGATVLCADV
CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
DAGAAAATSAEIAAGGGSAAPAAVDVSRRDQVVDLVRSAVSDHGRVDVMCNNAGIIIDVP
CCCCCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEC
VLDLSEEQLDRVLAVNLKGVLFGCQAAGAVMRSQRAGSIINMASGAFDTAPARLVAYSIS
CCCCCHHHHHHHHHEEHHHEEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHEEEECC
KAGVVQITRTLAKELGPDGVRVNAIAPGLVETDITRRHYAAEDGTVDEDKRERFLGRSRD
CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCHHHHHHCCCCCCCCHHHHHHHHCCCCC
LAPLRRIGTTEDIGHAALYLASEAARFVTGQVLRPNGGAAMP
CHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]