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The map label for this gene is yagI [C]

Identifier: 158317976

GI number: 158317976

Start: 7573518

End: 7574432

Strand: Reverse

Name: yagI [C]

Synonym: Franean1_6236

Alternate gene names: 158317976

Gene position: 7574432-7573518 (Counterclockwise)

Preceding gene: 158317977

Following gene: 158317975

Centisome position: 84.33

GC content: 74.1

Gene sequence:

>915_bases
ATGCCGCGGCCCGCCCCGGGGGCCGAGCGGACCGTCGCGCTCATCACCTTCCTGAGCCAGCATCCCGGCCGGCCTTTCGG
CCTGTCGGAGCTGGCCCGGCGGCTGGAGATGAACAAGGCGACCGCCCACGCGATGCTCGCCACCCTCAGCGACGCCGGCT
GGCTGCTGCGCGACCCGGAGGACAAGACCTACCGCCTCGGGCCCGCCCTGGTGGCCGTCGGCGACGCGGCCGCCGGATCC
GGGCGCCAGGCCCTCGAGCTCGCGCGGCCGCACATGCGCCGGCTCAGCGACGAGCTCGGTGTCCAGGCGGTGGCGAGCTC
CGTCATGGGCGAGGACATCGTCGTCCTCGCCGTCGAAGGGCACGCCGCGACGCCCGTCGGGTTCGGATCAAGGCCCGGTA
ACCGGGTTCCGCTGTCGCCGCCGCTCGGGACGGTCTTCATCGCCTGGTCCGACACCGAGACCGTCGAACGGTGGCTGCGC
CGGCTGAGTCCCCGTCCCGACGACCACCGGCTCGGCATCTACCGCGACGCCATCAAGGCGATCCGGCTCCGCGGGTACAC
GGTCGCACTCGACGACGACCGGCACCACAGCCTGGCCCGGGCGCTGAGAACCTTCGCCGCGGGCGACGGCGACGCCGAGG
TCCGCGCCGCGGTCGAACGCGTCATCCAGGCCCGGGGCGTCGACGACGACTACCTGCTCGTCGACCTCGGCGGCATCGAG
TCCTACCAGCTCAGCCTGATCGGGGCGCCGGTCTTCGACGGCGCCGGCCGGGTGTGCCTGGCCGTCACCCTCGCCGGCTT
CCCGCACCGCCTGAGCCCACAGCAGGTCGTCCCCTACGGCCGGCGGCTGACCGCGGCCACCACGGCGATCACCCGGGAGA
TCGGTGGACGCCCACCCAACCAGGCGGGGAGCTGA

Upstream 100 bases:

>100_bases
CCTGGCCTCCGAAGCCGCCCGGTTCGTCACGGGCCAGGTCCTGCGGCCCAACGGCGGCGCGGCGATGCCATGACGTGACC
GCGCGGCGCAGGCCCGCCTG

Downstream 100 bases:

>100_bases
CCCTGGGCCCGGCGCCGCCCGCTCCGTTACCGCCGGCGCGGGAACAACGTGCCTTGATGGTCAGCCCGCGGCCGGGTACC
AATGCCGGGACAGGGGGCCG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: IclR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein IclR; Regulatory Proteins IclR; Flavin Reductase Domain-Containing Protein; IclR Helix-Turn-Helix Domain Family Protein; Iclr Family Transcriptional Regulator; Transcription Regulator Protein; IclR Family Regulatory Protein; Transcriptional Regulator PadR Family Protein

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPRPAPGAERTVALITFLSQHPGRPFGLSELARRLEMNKATAHAMLATLSDAGWLLRDPEDKTYRLGPALVAVGDAAAGS
GRQALELARPHMRRLSDELGVQAVASSVMGEDIVVLAVEGHAATPVGFGSRPGNRVPLSPPLGTVFIAWSDTETVERWLR
RLSPRPDDHRLGIYRDAIKAIRLRGYTVALDDDRHHSLARALRTFAAGDGDAEVRAAVERVIQARGVDDDYLLVDLGGIE
SYQLSLIGAPVFDGAGRVCLAVTLAGFPHRLSPQQVVPYGRRLTAATTAITREIGGRPPNQAGS

Sequences:

>Translated_304_residues
MPRPAPGAERTVALITFLSQHPGRPFGLSELARRLEMNKATAHAMLATLSDAGWLLRDPEDKTYRLGPALVAVGDAAAGS
GRQALELARPHMRRLSDELGVQAVASSVMGEDIVVLAVEGHAATPVGFGSRPGNRVPLSPPLGTVFIAWSDTETVERWLR
RLSPRPDDHRLGIYRDAIKAIRLRGYTVALDDDRHHSLARALRTFAAGDGDAEVRAAVERVIQARGVDDDYLLVDLGGIE
SYQLSLIGAPVFDGAGRVCLAVTLAGFPHRLSPQQVVPYGRRLTAATTAITREIGGRPPNQAGS
>Mature_303_residues
PRPAPGAERTVALITFLSQHPGRPFGLSELARRLEMNKATAHAMLATLSDAGWLLRDPEDKTYRLGPALVAVGDAAAGSG
RQALELARPHMRRLSDELGVQAVASSVMGEDIVVLAVEGHAATPVGFGSRPGNRVPLSPPLGTVFIAWSDTETVERWLRR
LSPRPDDHRLGIYRDAIKAIRLRGYTVALDDDRHHSLARALRTFAAGDGDAEVRAAVERVIQARGVDDDYLLVDLGGIES
YQLSLIGAPVFDGAGRVCLAVTLAGFPHRLSPQQVVPYGRRLTAATTAITREIGGRPPNQAGS

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32606; Mature: 32474

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPAPGAERTVALITFLSQHPGRPFGLSELARRLEMNKATAHAMLATLSDAGWLLRDPE
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
DKTYRLGPALVAVGDAAAGSGRQALELARPHMRRLSDELGVQAVASSVMGEDIVVLAVEG
CCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
HAATPVGFGSRPGNRVPLSPPLGTVFIAWSDTETVERWLRRLSPRPDDHRLGIYRDAIKA
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IRLRGYTVALDDDRHHSLARALRTFAAGDGDAEVRAAVERVIQARGVDDDYLLVDLGGIE
HHHCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
SYQLSLIGAPVFDGAGRVCLAVTLAGFPHRLSPQQVVPYGRRLTAATTAITREIGGRPPN
EEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCC
QAGS
CCCC
>Mature Secondary Structure 
PRPAPGAERTVALITFLSQHPGRPFGLSELARRLEMNKATAHAMLATLSDAGWLLRDPE
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
DKTYRLGPALVAVGDAAAGSGRQALELARPHMRRLSDELGVQAVASSVMGEDIVVLAVEG
CCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
HAATPVGFGSRPGNRVPLSPPLGTVFIAWSDTETVERWLRRLSPRPDDHRLGIYRDAIKA
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IRLRGYTVALDDDRHHSLARALRTFAAGDGDAEVRAAVERVIQARGVDDDYLLVDLGGIE
HHHCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
SYQLSLIGAPVFDGAGRVCLAVTLAGFPHRLSPQQVVPYGRRLTAATTAITREIGGRPPN
EEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCC
QAGS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA