| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pur8 [H]
Identifier: 158317950
GI number: 158317950
Start: 7544422
End: 7545948
Strand: Reverse
Name: pur8 [H]
Synonym: Franean1_6210
Alternate gene names: 158317950
Gene position: 7545948-7544422 (Counterclockwise)
Preceding gene: 158317951
Following gene: 158317949
Centisome position: 84.01
GC content: 67.78
Gene sequence:
>1527_bases ATGTCTGCTGACAGCGCGACCGCCGCCCCCGTGCGACCGGGCACCTCCGCGGCCCCGCCCACGAGCCATCACCTCGGCCT GGCTCTGTTCGTGATCGCCGCAGCACAGCTGGTGGTGGTCCTCGACGCCACGATCACCAACATCGCTCTACCCAGCATCC AGACCGATCTCGACGTGTCCGACGCGAACCTGGCCTGGATCGTCAACTCCTACGCGCTGGCCTTCGGTGGGCTGCTACTG CTCGGCGGACGCACCGGCGATCTCTTCGGCCGGCGACGGATGTTTCAGACCGGCATCGCGATCTTTACGCTGGCCTCACT GCTGGGAGGACTGGCCCCCAACGAGGCCCTGTTGATCAGCGCCCGCGTCCTGCAAGGCATCGGCGCCGCGCTCGCTGCCC CCAACGCGCTGGCCCTGATCACTACGACATTTCCACCCGGCAAGCCCCGCAATACGGCTATGGGTGTGTACGCCGCGATG GGAGGCGTCGGCGCCACAGTCGGTCTGCTGTTGGGCGGCACACTCACCGACGTCCTGAGCTGGCGATGGGTCTTCTTCAT CAACGTTCCCATCGGCCTGGTCGTCCTCGTCGGAACCCGGAGCCTCGTCGAGGCCGAACGCGACCCGGGCCGCGTGGACG TCCCCGGCGCTGTCACGGGAACGGGCGGCCTGATCGCACTGGTCTACGGCATCACCCACGGCGGCGAGCACGGCTGGAGC GACAGCGCCACCCTGACCGCCTTCGCCGTGGCGGCCGTGCTATTGGTGGCGTTCCTTCTCATCCAGGCCCGGACCGCCCA CCCGATGATGCCGCTACGGCTGTTCCAGGACCGCAACCGGTCTGGTTCCTACGCCACGATGCTGCTCATCGGTGCCGGCA TGTTCGCGACCTTCTACTTCCTGACGCTGTACATGCAGCTCATCCTCGGCTACAGCCCCGTCCGGACCGGCTTCGCCTAC CTGCCCTTCAGCTTCGGCATCGCCATCGCCGCCGGTGTCAGCTCCAAACTGGTCACCCACGTCGCCCCACGCGTGATCGC CGGACCGGGCCTGCTCGCGGCGGCCGCGGGCATGCTCTGGTTCGCCGCCCTCGATCCGGACTCCCCGTACGCCGGACACC TGATGCCGGCGATGTTCCTCACCGGCCTCGGCCTCGGCCTGAGCTTCGTCCCCATGACACTCGGCGCAGTCAGCGACGTT GCACACGAGGACTCCGGGATCGCCTCAGCACTCCTGAACACCGCCCAGCAGATCGGCGGAGCCCTCGGCCTCGCGGTCCT GTCAACCATCGCCACCTCCACGGCCGACAACAAGCTTCCCGAAGCCGCCGGAGCCCTCTACCAAGGCCTGGCCACGAACG ACGTCATCCTGATCGCGAGAGCACAGGACGCACTGACCCACGGCTACTCCATGGCTTTCGCCGCCGCCGCCGCGATGTTC CTCGCCGGTCTGATCGTCACCGCCACCGCCATCAACACTGCCAGGCAACACCACATCGAGGACGCGCCTCCCGCACACAT CGGCTGA
Upstream 100 bases:
>100_bases TTCACCTCGCCGGAAGCCGCCGATCTAGAACAAGAAGTCTACCCCTGCACCTGTTTTATGGCCGGGGCAATTTTGCCAGC GCACCTTCTGGAGTACCTGT
Downstream 100 bases:
>100_bases CCTGGCCGGCGGAGTGGAGTGGCCACTCGCTGTGATGGTTGGCCATTAGATGGCCAATGGCCGCGATGGTTGGCCAGTCC TCGGGTGGCGTGGCTCGTAT
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MSADSATAAPVRPGTSAAPPTSHHLGLALFVIAAAQLVVVLDATITNIALPSIQTDLDVSDANLAWIVNSYALAFGGLLL LGGRTGDLFGRRRMFQTGIAIFTLASLLGGLAPNEALLISARVLQGIGAALAAPNALALITTTFPPGKPRNTAMGVYAAM GGVGATVGLLLGGTLTDVLSWRWVFFINVPIGLVVLVGTRSLVEAERDPGRVDVPGAVTGTGGLIALVYGITHGGEHGWS DSATLTAFAVAAVLLVAFLLIQARTAHPMMPLRLFQDRNRSGSYATMLLIGAGMFATFYFLTLYMQLILGYSPVRTGFAY LPFSFGIAIAAGVSSKLVTHVAPRVIAGPGLLAAAAGMLWFAALDPDSPYAGHLMPAMFLTGLGLGLSFVPMTLGAVSDV AHEDSGIASALLNTAQQIGGALGLAVLSTIATSTADNKLPEAAGALYQGLATNDVILIARAQDALTHGYSMAFAAAAAMF LAGLIVTATAINTARQHHIEDAPPAHIG
Sequences:
>Translated_508_residues MSADSATAAPVRPGTSAAPPTSHHLGLALFVIAAAQLVVVLDATITNIALPSIQTDLDVSDANLAWIVNSYALAFGGLLL LGGRTGDLFGRRRMFQTGIAIFTLASLLGGLAPNEALLISARVLQGIGAALAAPNALALITTTFPPGKPRNTAMGVYAAM GGVGATVGLLLGGTLTDVLSWRWVFFINVPIGLVVLVGTRSLVEAERDPGRVDVPGAVTGTGGLIALVYGITHGGEHGWS DSATLTAFAVAAVLLVAFLLIQARTAHPMMPLRLFQDRNRSGSYATMLLIGAGMFATFYFLTLYMQLILGYSPVRTGFAY LPFSFGIAIAAGVSSKLVTHVAPRVIAGPGLLAAAAGMLWFAALDPDSPYAGHLMPAMFLTGLGLGLSFVPMTLGAVSDV AHEDSGIASALLNTAQQIGGALGLAVLSTIATSTADNKLPEAAGALYQGLATNDVILIARAQDALTHGYSMAFAAAAAMF LAGLIVTATAINTARQHHIEDAPPAHIG >Mature_507_residues SADSATAAPVRPGTSAAPPTSHHLGLALFVIAAAQLVVVLDATITNIALPSIQTDLDVSDANLAWIVNSYALAFGGLLLL GGRTGDLFGRRRMFQTGIAIFTLASLLGGLAPNEALLISARVLQGIGAALAAPNALALITTTFPPGKPRNTAMGVYAAMG GVGATVGLLLGGTLTDVLSWRWVFFINVPIGLVVLVGTRSLVEAERDPGRVDVPGAVTGTGGLIALVYGITHGGEHGWSD SATLTAFAVAAVLLVAFLLIQARTAHPMMPLRLFQDRNRSGSYATMLLIGAGMFATFYFLTLYMQLILGYSPVRTGFAYL PFSFGIAIAAGVSSKLVTHVAPRVIAGPGLLAAAAGMLWFAALDPDSPYAGHLMPAMFLTGLGLGLSFVPMTLGAVSDVA HEDSGIASALLNTAQQIGGALGLAVLSTIATSTADNKLPEAAGALYQGLATNDVILIARAQDALTHGYSMAFAAAAAMFL AGLIVTATAINTARQHHIEDAPPAHIG
Specific function: May be involved in active puromycin efflux energized by a proton-dependent electrochemical gradient. In addition, it could be implicated in secreting N-acetylpuromycin, the last intermediate of the puromycin biosynthesis pathway, to the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=406, Percent_Identity=31.5270935960591, Blast_Score=159, Evalue=5e-40, Organism=Escherichia coli, GI1788710, Length=424, Percent_Identity=25.7075471698113, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI1789042, Length=411, Percent_Identity=27.007299270073, Blast_Score=132, Evalue=6e-32, Organism=Escherichia coli, GI1790195, Length=414, Percent_Identity=30.1932367149758, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI1788392, Length=407, Percent_Identity=28.7469287469287, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324954, Length=389, Percent_Identity=26.2210796915167, Blast_Score=134, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6323520, Length=444, Percent_Identity=26.8018018018018, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6323935, Length=462, Percent_Identity=24.8917748917749, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322958, Length=499, Percent_Identity=24.0480961923848, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6325455, Length=254, Percent_Identity=25.9842519685039, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319770, Length=386, Percent_Identity=23.3160621761658, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321663, Length=133, Percent_Identity=30.0751879699248, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52028; Mature: 51897
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADSATAAPVRPGTSAAPPTSHHLGLALFVIAAAQLVVVLDATITNIALPSIQTDLDVS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DANLAWIVNSYALAFGGLLLLGGRTGDLFGRRRMFQTGIAIFTLASLLGGLAPNEALLIS CCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARVLQGIGAALAAPNALALITTTFPPGKPRNTAMGVYAAMGGVGATVGLLLGGTLTDVLS HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH WRWVFFINVPIGLVVLVGTRSLVEAERDPGRVDVPGAVTGTGGLIALVYGITHGGEHGWS CEEEEEEECCHHEEEEECCHHHHHHCCCCCCEECCCCEECCCHHHHHHHHHCCCCCCCCC DSATLTAFAVAAVLLVAFLLIQARTAHPMMPLRLFQDRNRSGSYATMLLIGAGMFATFYF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LTLYMQLILGYSPVRTGFAYLPFSFGIAIAAGVSSKLVTHVAPRVIAGPGLLAAAAGMLW HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHCCCCHHHHHHHHHE FAALDPDSPYAGHLMPAMFLTGLGLGLSFVPMTLGAVSDVAHEDSGIASALLNTAQQIGG EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ALGLAVLSTIATSTADNKLPEAAGALYQGLATNDVILIARAQDALTHGYSMAFAAAAAMF HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH LAGLIVTATAINTARQHHIEDAPPAHIG HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SADSATAAPVRPGTSAAPPTSHHLGLALFVIAAAQLVVVLDATITNIALPSIQTDLDVS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DANLAWIVNSYALAFGGLLLLGGRTGDLFGRRRMFQTGIAIFTLASLLGGLAPNEALLIS CCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARVLQGIGAALAAPNALALITTTFPPGKPRNTAMGVYAAMGGVGATVGLLLGGTLTDVLS HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH WRWVFFINVPIGLVVLVGTRSLVEAERDPGRVDVPGAVTGTGGLIALVYGITHGGEHGWS CEEEEEEECCHHEEEEECCHHHHHHCCCCCCEECCCCEECCCHHHHHHHHHCCCCCCCCC DSATLTAFAVAAVLLVAFLLIQARTAHPMMPLRLFQDRNRSGSYATMLLIGAGMFATFYF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LTLYMQLILGYSPVRTGFAYLPFSFGIAIAAGVSSKLVTHVAPRVIAGPGLLAAAAGMLW HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHCCCCHHHHHHHHHE FAALDPDSPYAGHLMPAMFLTGLGLGLSFVPMTLGAVSDVAHEDSGIASALLNTAQQIGG EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ALGLAVLSTIATSTADNKLPEAAGALYQGLATNDVILIARAQDALTHGYSMAFAAAAAMF HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH LAGLIVTATAINTARQHHIEDAPPAHIG HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7916693 [H]