| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is ubiE [C]
Identifier: 158317951
GI number: 158317951
Start: 7546745
End: 7547353
Strand: Reverse
Name: ubiE [C]
Synonym: Franean1_6211
Alternate gene names: 158317951
Gene position: 7547353-7546745 (Counterclockwise)
Preceding gene: 158317952
Following gene: 158317950
Centisome position: 84.03
GC content: 69.46
Gene sequence:
>609_bases ATGGGCTTCTACGACGACCAGATGCTGCCCCGGTTCATCGACCTTGCCCTCGGGAGGCCGATGGAGCCCACCCGGGCCCG CGTCACCACCGGCCTGTCCGGCGAGGTCCTGGAGATCGGGTTCGGTTCCGGGCGTAACCTGCCCCACCTTCCACCTGAAG TCACCCGGCTCCTGGCTGTGGAACCCGCGGCCGTCGGCCGCAGGCTGGCGGCCCGCCGCATCGCCGCCGCCCCCATCCCG GTCGAGTTCGTCGGCGACGACAGCCAGCGGCTACCCGTCCCGGACGGATCGGTGGACCACGTGCTGGTCACGTGGACCCT GTGCACCATCCCGGACGTCGACCGGGCGCTGCGTGAGGCGCGCCGGGTGTTGCGACCCGGCGGCACGGTGCACTTCGTCG AGCATGGCCGTTCACCCAACCACCGTGTCGCCCGGCGGCAAGAGCGCCTCACGCCCCTGTGGGGAAAGGTGTTCGGTGGC TGCCACCTCAACCGGCCTGTCGATAAGTTGATCGAAAACGCCGGGTTCACGCTCGACACCGTCCAGACGTACCGGATGGG CGGGCCGGAGCTCTTCAGCTTCGCCTACGAGGGCATCGCGTCGAAGTAA
Upstream 100 bases:
>100_bases CATGGAATGCGACCCGGCCTGACACAACAGAGCCGGACAGGTTATTCCGACCGCCGTGGAGCTGACCTGCGTCGATATCA AAGAGAACCAGGGAGAAGTG
Downstream 100 bases:
>100_bases GACTGACCTATAGGGCGACGGAAATTAGTCTGGGTCTGTGCCTGGAATGAATGTGACGGCGCGGCCCCTGCCGCGCTGGT CGCTAACCGTGCGAAGCTGC
Product: type 11 methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Methyltransferase UbiE/COQ5 Family; Phosphatidylethanolamine N-Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Methyltransferase Domain Family; Phospholipid Methyltransferase; Sam Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; UbiE Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Generic Methyltransferase; SAM-Dependent Methyltransferase UbiE/COQ5 Family; Ubiquinone/Menaquinone Biosynthesis Methyl Transferase; Methyltransferase Domain Family Protein; UbiE/COQ5 Methyltransferase; Response Regulator Receiver Protein
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGFYDDQMLPRFIDLALGRPMEPTRARVTTGLSGEVLEIGFGSGRNLPHLPPEVTRLLAVEPAAVGRRLAARRIAAAPIP VEFVGDDSQRLPVPDGSVDHVLVTWTLCTIPDVDRALREARRVLRPGGTVHFVEHGRSPNHRVARRQERLTPLWGKVFGG CHLNRPVDKLIENAGFTLDTVQTYRMGGPELFSFAYEGIASK
Sequences:
>Translated_202_residues MGFYDDQMLPRFIDLALGRPMEPTRARVTTGLSGEVLEIGFGSGRNLPHLPPEVTRLLAVEPAAVGRRLAARRIAAAPIP VEFVGDDSQRLPVPDGSVDHVLVTWTLCTIPDVDRALREARRVLRPGGTVHFVEHGRSPNHRVARRQERLTPLWGKVFGG CHLNRPVDKLIENAGFTLDTVQTYRMGGPELFSFAYEGIASK >Mature_201_residues GFYDDQMLPRFIDLALGRPMEPTRARVTTGLSGEVLEIGFGSGRNLPHLPPEVTRLLAVEPAAVGRRLAARRIAAAPIPV EFVGDDSQRLPVPDGSVDHVLVTWTLCTIPDVDRALREARRVLRPGGTVHFVEHGRSPNHRVARRQERLTPLWGKVFGGC HLNRPVDKLIENAGFTLDTVQTYRMGGPELFSFAYEGIASK
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI164663805, Length=168, Percent_Identity=35.1190476190476, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI89145417, Length=170, Percent_Identity=32.3529411764706, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 22324; Mature: 22193
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS01184 UBIE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFYDDQMLPRFIDLALGRPMEPTRARVTTGLSGEVLEIGFGSGRNLPHLPPEVTRLLAV CCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHC EPAAVGRRLAARRIAAAPIPVEFVGDDSQRLPVPDGSVDHVLVTWTLCTIPDVDRALREA CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH RRVLRPGGTVHFVEHGRSPNHRVARRQERLTPLWGKVFGGCHLNRPVDKLIENAGFTLDT HHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCEEEH VQTYRMGGPELFSFAYEGIASK HHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure GFYDDQMLPRFIDLALGRPMEPTRARVTTGLSGEVLEIGFGSGRNLPHLPPEVTRLLAV CCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHC EPAAVGRRLAARRIAAAPIPVEFVGDDSQRLPVPDGSVDHVLVTWTLCTIPDVDRALREA CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH RRVLRPGGTVHFVEHGRSPNHRVARRQERLTPLWGKVFGGCHLNRPVDKLIENAGFTLDT HHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCEEEH VQTYRMGGPELFSFAYEGIASK HHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA