Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317905

Identifier: 158317905

GI number: 158317905

Start: 7497451

End: 7497945

Strand: Direct

Name: 158317905

Synonym: Franean1_6163

Alternate gene names: NA

Gene position: 7497451-7497945 (Clockwise)

Preceding gene: 158317904

Following gene: 158317908

Centisome position: 83.47

GC content: 71.11

Gene sequence:

>495_bases
ATGACGGCACCCATCGACGGCGCGGAACGCGAACGGCTCGACAAGCTGATCAGTACCGCCCTGGACGACCTCGGCGTGGC
CTACGAGCACCCCGACACCGGCGCCTTCCTGGTCACGCTCGAAGGCGAGCACAAGCTGCGCACCATGACCTGGCTCGTGG
TCCAGGACCACACGCTGCTCGTCGAGGCGTTCTTCATGCGCGCGCCCGCCGAGAACGCCGCCGGTACCTACGGCTTCCTG
CTCAGCCGGAACGCCCGCACCTACGGCGTGCACTTCTCGATCGACCCCGTCGGCGACATCTTCCTGACCGGCCAGGTCTC
GCTGACCGCGGTCACCGCCGAGGAGGTCGACCGCCTCCTCGGCTGCGTCGGCTCCTACGCCGACGACAACTTCGACCCGG
CCATCGCGCTCGGCTTCGCCGGCGCCATCGAGCGCGAACGCGCCTGGCGCGCCAGGCTGGCCGCCGACGCCGGCACCGCC
CCCCGCCCCACCTGA

Upstream 100 bases:

>100_bases
CGCCGAGTCGGCTAGCGTCGCCGACGGCGGGTTCGGCCGGGCTCGGCGTCACCGCGCCTGCCCGGCTTGACCGGCACCAC
GAACGGGGAGGTCCCTGCGC

Downstream 100 bases:

>100_bases
CGCCCCAGCCGCCGGCAGACAGCCCCGACCGGCCGGCAACCCGGCCGGTGCCGGGTCAGGACGGTGAGCGGTGCAGGCGG
GCGGAGAGGTGGGACTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTAPIDGAERERLDKLISTALDDLGVAYEHPDTGAFLVTLEGEHKLRTMTWLVVQDHTLLVEAFFMRAPAENAAGTYGFL
LSRNARTYGVHFSIDPVGDIFLTGQVSLTAVTAEEVDRLLGCVGSYADDNFDPAIALGFAGAIERERAWRARLAADAGTA
PRPT

Sequences:

>Translated_164_residues
MTAPIDGAERERLDKLISTALDDLGVAYEHPDTGAFLVTLEGEHKLRTMTWLVVQDHTLLVEAFFMRAPAENAAGTYGFL
LSRNARTYGVHFSIDPVGDIFLTGQVSLTAVTAEEVDRLLGCVGSYADDNFDPAIALGFAGAIERERAWRARLAADAGTA
PRPT
>Mature_163_residues
TAPIDGAERERLDKLISTALDDLGVAYEHPDTGAFLVTLEGEHKLRTMTWLVVQDHTLLVEAFFMRAPAENAAGTYGFLL
SRNARTYGVHFSIDPVGDIFLTGQVSLTAVTAEEVDRLLGCVGSYADDNFDPAIALGFAGAIERERAWRARLAADAGTAP
RPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML2442 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019706 [H]

Pfam domain/function: PF10770 DUF2596 [H]

EC number: NA

Molecular weight: Translated: 17753; Mature: 17622

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPIDGAERERLDKLISTALDDLGVAYEHPDTGAFLVTLEGEHKLRTMTWLVVQDHTLL
CCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCHHH
VEAFFMRAPAENAAGTYGFLLSRNARTYGVHFSIDPVGDIFLTGQVSLTAVTAEEVDRLL
HHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEECCEEEEEECHHHHHHHH
GCVGSYADDNFDPAIALGFAGAIERERAWRARLAADAGTAPRPT
HHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TAPIDGAERERLDKLISTALDDLGVAYEHPDTGAFLVTLEGEHKLRTMTWLVVQDHTLL
CCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCHHH
VEAFFMRAPAENAAGTYGFLLSRNARTYGVHFSIDPVGDIFLTGQVSLTAVTAEEVDRLL
HHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEECCEEEEEECHHHHHHHH
GCVGSYADDNFDPAIALGFAGAIERERAWRARLAADAGTAPRPT
HHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]