| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yrpG [H]
Identifier: 158317901
GI number: 158317901
Start: 7492759
End: 7493712
Strand: Direct
Name: yrpG [H]
Synonym: Franean1_6159
Alternate gene names: 158317901
Gene position: 7492759-7493712 (Clockwise)
Preceding gene: 158317900
Following gene: 158317902
Centisome position: 83.42
GC content: 70.75
Gene sequence:
>954_bases ATGCGTTATCGCCCCCTGGGATCTTCGGGCCTGATGGTCTCCGTCGTCGGGCTGGGATGCAACAACTTCGGGTCCAGAGT CGACCTGACCGGTACGCGTGCCGTCGTCGAGGCCGCCCTCGACTCCGGGATCAACTTCTTCGACACCGCCGACACCTACG GGAACAAGGGCGGCTCGGAGACCCTGCTGGGGCACGTGCTCCGGGGCCGGCGCGACGACGTCGTCCTCGCCACCAAGGTC GGCAACGACATGGGCGGCATGTACGGCCAGGACTTCAACGCGCGCGCCTCCCGCCGCTACATCCGCAAGGCGGTCGAGGG GTCGCTGAGCCGGCTGCAGACCGACTACCTCGACCTTTACCAGCTCCACAACCTGGACGCCTTCACCCCCGTCGAGGAGA CGCTGGAGGCGCTCGGCGAGCTCGTCCAGGAGGGCAAGGTCCGCTACGTCGGCTCGTGCAACCTGGACGCCTGGCAGGTG TCCGACGCCGAGTGGACGGCACGGGCGTCCGGCACCACCCGGTTCATCTCTGCCCAGAACCACTACAACCTGCTCGTCCG GGACGTCGAGGCCGAGCTGGTGCCGGCCGCCCTCAAGTACGGGATCGGGGTCATCCCCTACTTCCCGCTGGAGAACGGCA TCCTGAGCGGCAAGTACCTGCGCGACGAGGCGCCGCCGGCCGGCACCCGGATGGCGGGCCGCCAGGACGAGCTCACCGAC GACCTGTTCGACCGGGTGGAGACCCTGGAGACCTTCGCCAGGGAGCGGGACCGCTCGCTGCTGGACGTGGCGATCGGCGG CCTCGCCGCCCAGCCCGCGGTCGCCTCCGTGATCGCCGGTGCGACGAGCGCGGCGCAGGTCCGGGCGAACGCCGCGGCCG GCCAGTGGCAGCCCCGAGCGGACGACCTCGCCGTCCTCGACAAGATCGCTCCCACCCGCCGCCCGGGGGCCTGA
Upstream 100 bases:
>100_bases TGAAAACAGCAGAACAAAAAATCAACACCACATCTGCGCGCACCGCGAACCCCAGACCCTGATTGCTGGCGGTTCGTGGT GCGCGTGTTGTATTAAGGGC
Downstream 100 bases:
>100_bases CACCTCGGGCCCGCTCGACGGCCCGGATCGGGAGCCTGACTCCTCAGCCGGGCTCGGGGCCCTGGCGCCTCAGGCCGGGC TCGGCTGAAAGCGCAGGGCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRYRPLGSSGLMVSVVGLGCNNFGSRVDLTGTRAVVEAALDSGINFFDTADTYGNKGGSETLLGHVLRGRRDDVVLATKV GNDMGGMYGQDFNARASRRYIRKAVEGSLSRLQTDYLDLYQLHNLDAFTPVEETLEALGELVQEGKVRYVGSCNLDAWQV SDAEWTARASGTTRFISAQNHYNLLVRDVEAELVPAALKYGIGVIPYFPLENGILSGKYLRDEAPPAGTRMAGRQDELTD DLFDRVETLETFARERDRSLLDVAIGGLAAQPAVASVIAGATSAAQVRANAAAGQWQPRADDLAVLDKIAPTRRPGA
Sequences:
>Translated_317_residues MRYRPLGSSGLMVSVVGLGCNNFGSRVDLTGTRAVVEAALDSGINFFDTADTYGNKGGSETLLGHVLRGRRDDVVLATKV GNDMGGMYGQDFNARASRRYIRKAVEGSLSRLQTDYLDLYQLHNLDAFTPVEETLEALGELVQEGKVRYVGSCNLDAWQV SDAEWTARASGTTRFISAQNHYNLLVRDVEAELVPAALKYGIGVIPYFPLENGILSGKYLRDEAPPAGTRMAGRQDELTD DLFDRVETLETFARERDRSLLDVAIGGLAAQPAVASVIAGATSAAQVRANAAAGQWQPRADDLAVLDKIAPTRRPGA >Mature_317_residues MRYRPLGSSGLMVSVVGLGCNNFGSRVDLTGTRAVVEAALDSGINFFDTADTYGNKGGSETLLGHVLRGRRDDVVLATKV GNDMGGMYGQDFNARASRRYIRKAVEGSLSRLQTDYLDLYQLHNLDAFTPVEETLEALGELVQEGKVRYVGSCNLDAWQV SDAEWTARASGTTRFISAQNHYNLLVRDVEAELVPAALKYGIGVIPYFPLENGILSGKYLRDEAPPAGTRMAGRQDELTD DLFDRVETLETFARERDRSLLDVAIGGLAAQPAVASVIAGATSAAQVRANAAAGQWQPRADDLAVLDKIAPTRRPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=312, Percent_Identity=31.7307692307692, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI4504825, Length=310, Percent_Identity=31.6129032258064, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI27436964, Length=319, Percent_Identity=29.153605015674, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI27436962, Length=319, Percent_Identity=29.153605015674, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI27436966, Length=319, Percent_Identity=28.8401253918495, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI27436971, Length=326, Percent_Identity=29.4478527607362, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI223718702, Length=306, Percent_Identity=32.0261437908497, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI41152114, Length=202, Percent_Identity=34.6534653465347, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI41327764, Length=303, Percent_Identity=32.013201320132, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI223718708, Length=157, Percent_Identity=37.5796178343949, Blast_Score=79, Evalue=8e-15, Organism=Escherichia coli, GI87081735, Length=304, Percent_Identity=35.8552631578947, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1789375, Length=309, Percent_Identity=33.9805825242718, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=31.3218390804598, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1788070, Length=313, Percent_Identity=32.9073482428115, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1788081, Length=281, Percent_Identity=29.5373665480427, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787674, Length=300, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=336, Percent_Identity=30.3571428571429, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319958, Length=288, Percent_Identity=28.8194444444444, Blast_Score=113, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323998, Length=324, Percent_Identity=27.7777777777778, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=322, Percent_Identity=29.1925465838509, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6322615, Length=252, Percent_Identity=28.968253968254, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321052, Length=160, Percent_Identity=31.875, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640980, Length=337, Percent_Identity=27.5964391691395, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45549126, Length=337, Percent_Identity=27.299703264095, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24646155, Length=197, Percent_Identity=37.0558375634518, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24646159, Length=228, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34230; Mature: 34230
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRPLGSSGLMVSVVGLGCNNFGSRVDLTGTRAVVEAALDSGINFFDTADTYGNKGGSE CCCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCEECCHHHCCCCCHH TLLGHVLRGRRDDVVLATKVGNDMGGMYGQDFNARASRRYIRKAVEGSLSRLQTDYLDLY HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLHNLDAFTPVEETLEALGELVQEGKVRYVGSCNLDAWQVSDAEWTARASGTTRFISAQN HHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCEEEECCCCEEEEECCC HYNLLVRDVEAELVPAALKYGIGVIPYFPLENGILSGKYLRDEAPPAGTRMAGRQDELTD CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DLFDRVETLETFARERDRSLLDVAIGGLAAQPAVASVIAGATSAAQVRANAAAGQWQPRA HHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCC DDLAVLDKIAPTRRPGA HHHHHHHHHCCCCCCCC >Mature Secondary Structure MRYRPLGSSGLMVSVVGLGCNNFGSRVDLTGTRAVVEAALDSGINFFDTADTYGNKGGSE CCCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCEECCHHHCCCCCHH TLLGHVLRGRRDDVVLATKVGNDMGGMYGQDFNARASRRYIRKAVEGSLSRLQTDYLDLY HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLHNLDAFTPVEETLEALGELVQEGKVRYVGSCNLDAWQVSDAEWTARASGTTRFISAQN HHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCEEEECCCCEEEEECCC HYNLLVRDVEAELVPAALKYGIGVIPYFPLENGILSGKYLRDEAPPAGTRMAGRQDELTD CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DLFDRVETLETFARERDRSLLDVAIGGLAAQPAVASVIAGATSAAQVRANAAAGQWQPRA HHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCC DDLAVLDKIAPTRRPGA HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]