| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317893
Identifier: 158317893
GI number: 158317893
Start: 7483214
End: 7484563
Strand: Reverse
Name: 158317893
Synonym: Franean1_6151
Alternate gene names: NA
Gene position: 7484563-7483214 (Counterclockwise)
Preceding gene: 158317894
Following gene: 158317890
Centisome position: 83.33
GC content: 74.52
Gene sequence:
>1350_bases ATGCTGACGGACAATGCCCACGCCTGCACCCATCCCCTCGCCTTCGTCCGCGCTCAGCGTGGGTGGTCCTACCAACGGCT GGCACGCGTCGTCGCGCGTCGGGCCCGAGATCTCGGGGTCGCGAACATGGCCGCCGAGCGGCAGAAGGTCTGGCGCTGGG AGCACCGCGGTGTTGTGCCGGACCGGGTCTCCCAGCTGGCGCTCGCCGCCGAGCTCGGGGTCCCGACCGACCGGCTGGAG TCCCACCCGTGGCCGTCCTGGCTGCCGACCGGTGACGCCGTGCGCACGGAGTACCCGTGGACGGCCTCGGGCAGCGTCAC CTCGCTCATGGACGTCGTCGAGGACGCGCTGACCGACCGCCGCGGCTTCCTGACCATCACCGGGCCCGGTGTCGCGTCGC TGTCGTCGGAGTGGCTCGGCCTGGAGCCGGCCCGGCTGCAGGTCGCGCTCGCCGGCGGCCAGGTGGACGAGCAGATCGTC AACCGGATCGAGCACAACATCCCCGGCCTGCGGGTGATGGACGAGCGTCTCGGCGGGGAGAGCGTGCGGCGGCTGGTGGA CGCCGAGCTCGGCGTGGTCGCAGACCTGCTCGCCCGCGGCTCCTACACCGAGGCGATCGGCCGGCACCTGCACCTGGTCG CGGCCGAGCTCGCCCGGTTCGCCGGCTGGGTCTCCTTCGACGCAGGCTTCCAGACCGCGGCGCAGCGGTACTGGGTGACC GCGCTGCACGCCGCGCACGCCGCGGGGGACCGGATGCTCGGCGCGAACGTCCTGAAGAACATGTCGCTGCAGTGCGTGGA CTTCGCCCGGCCGCGTGAGGCGGTCGACCTGGCGGAGGCCGCGGTCGCCAGCGCGCGGCGGGCGACCGGCCGGGTCGCGG CGATGCTGCAGATGCGCCGGGCCCGCGCGCACGCCGCGCTGGGCGAGGCCAGCGCCTGCGCCCAGGCGCTGGCCTGCGCC GAGGCGGCGTTCGTCGAGGCACGCGCGGAGGACCCGGCCTGGTCGGCCTACTTCGACGACGCCGAGTACCAGGCGCAGGT CGGCAGCTGCTACATCGACCTCGGCCACCTCGTGCACGCCGATCGCTGGCTCGAGGGCTCGCTGGCCATCCACCCGCACG AGCGCACCCGGGACCGCGCGACCTACCTGTTGCGGCGGGCCGCCGTCCAGATCGACCTGGGCAACCTCGACGGCGGGTGC TCGCTGGCGAAGGAGGCCCTGCCGATGCTGGAGGCGACCCGGTCGAAGCGGAACAGCCGGCGTGCCGACGAGGTCCGGCG GCGGCTGCGCCGGCACTCGTCGGACCCGGCCGCGCGTGAGCTCGACCAGGTACTGGCCCGCACGGCCTGA
Upstream 100 bases:
>100_bases CAACGCACTCTCCATCGCCCTGGGACACGAAGATGTCGCGACATAGCGTTGCTAGCTGGTCACGCAAGCGACTGTGTCAG CGACTAGAGGAGAGACGTCG
Downstream 100 bases:
>100_bases GTAACCGGCGGCCCGCCGGTCATCCCGGCGGCCGCCGGACAGGCGGGCGGTGGCCGCCGGTCAGCCTCCGGTGTGCGGGT GCAGCAGGCGCCCCGCGGGA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ORF1590 and ORF1422 [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MLTDNAHACTHPLAFVRAQRGWSYQRLARVVARRARDLGVANMAAERQKVWRWEHRGVVPDRVSQLALAAELGVPTDRLE SHPWPSWLPTGDAVRTEYPWTASGSVTSLMDVVEDALTDRRGFLTITGPGVASLSSEWLGLEPARLQVALAGGQVDEQIV NRIEHNIPGLRVMDERLGGESVRRLVDAELGVVADLLARGSYTEAIGRHLHLVAAELARFAGWVSFDAGFQTAAQRYWVT ALHAAHAAGDRMLGANVLKNMSLQCVDFARPREAVDLAEAAVASARRATGRVAAMLQMRRARAHAALGEASACAQALACA EAAFVEARAEDPAWSAYFDDAEYQAQVGSCYIDLGHLVHADRWLEGSLAIHPHERTRDRATYLLRRAAVQIDLGNLDGGC SLAKEALPMLEATRSKRNSRRADEVRRRLRRHSSDPAARELDQVLARTA
Sequences:
>Translated_449_residues MLTDNAHACTHPLAFVRAQRGWSYQRLARVVARRARDLGVANMAAERQKVWRWEHRGVVPDRVSQLALAAELGVPTDRLE SHPWPSWLPTGDAVRTEYPWTASGSVTSLMDVVEDALTDRRGFLTITGPGVASLSSEWLGLEPARLQVALAGGQVDEQIV NRIEHNIPGLRVMDERLGGESVRRLVDAELGVVADLLARGSYTEAIGRHLHLVAAELARFAGWVSFDAGFQTAAQRYWVT ALHAAHAAGDRMLGANVLKNMSLQCVDFARPREAVDLAEAAVASARRATGRVAAMLQMRRARAHAALGEASACAQALACA EAAFVEARAEDPAWSAYFDDAEYQAQVGSCYIDLGHLVHADRWLEGSLAIHPHERTRDRATYLLRRAAVQIDLGNLDGGC SLAKEALPMLEATRSKRNSRRADEVRRRLRRHSSDPAARELDQVLARTA >Mature_449_residues MLTDNAHACTHPLAFVRAQRGWSYQRLARVVARRARDLGVANMAAERQKVWRWEHRGVVPDRVSQLALAAELGVPTDRLE SHPWPSWLPTGDAVRTEYPWTASGSVTSLMDVVEDALTDRRGFLTITGPGVASLSSEWLGLEPARLQVALAGGQVDEQIV NRIEHNIPGLRVMDERLGGESVRRLVDAELGVVADLLARGSYTEAIGRHLHLVAAELARFAGWVSFDAGFQTAAQRYWVT ALHAAHAAGDRMLGANVLKNMSLQCVDFARPREAVDLAEAAVASARRATGRVAAMLQMRRARAHAALGEASACAQALACA EAAFVEARAEDPAWSAYFDDAEYQAQVGSCYIDLGHLVHADRWLEGSLAIHPHERTRDRATYLLRRAAVQIDLGNLDGGC SLAKEALPMLEATRSKRNSRRADEVRRRLRRHSSDPAARELDQVLARTA
Specific function: Might be a catalyst/regulator pair of proteins involved in the temporal controlled sporulation process. The decrease in level of the smaller protein early in sporulation may relieve negative regulation of the activity of the larger protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49254; Mature: 49254
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDNAHACTHPLAFVRAQRGWSYQRLARVVARRARDLGVANMAAERQKVWRWEHRGVVP CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH DRVSQLALAAELGVPTDRLESHPWPSWLPTGDAVRTEYPWTASGSVTSLMDVVEDALTDR HHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC RGFLTITGPGVASLSSEWLGLEPARLQVALAGGQVDEQIVNRIEHNIPGLRVMDERLGGE CCEEEECCCCHHHHCHHHCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHH SVRRLVDAELGVVADLLARGSYTEAIGRHLHLVAAELARFAGWVSFDAGFQTAAQRYWVT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ALHAAHAAGDRMLGANVLKNMSLQCVDFARPREAVDLAEAAVASARRATGRVAAMLQMRR HHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAHAALGEASACAQALACAEAAFVEARAEDPAWSAYFDDAEYQAQVGSCYIDLGHLVHA HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHEEEHHHHHHH DRWLEGSLAIHPHERTRDRATYLLRRAAVQIDLGNLDGGCSLAKEALPMLEATRSKRNSR HHHCCCCEEECCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC RADEVRRRLRRHSSDPAARELDQVLARTA CHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLTDNAHACTHPLAFVRAQRGWSYQRLARVVARRARDLGVANMAAERQKVWRWEHRGVVP CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH DRVSQLALAAELGVPTDRLESHPWPSWLPTGDAVRTEYPWTASGSVTSLMDVVEDALTDR HHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC RGFLTITGPGVASLSSEWLGLEPARLQVALAGGQVDEQIVNRIEHNIPGLRVMDERLGGE CCEEEECCCCHHHHCHHHCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHH SVRRLVDAELGVVADLLARGSYTEAIGRHLHLVAAELARFAGWVSFDAGFQTAAQRYWVT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ALHAAHAAGDRMLGANVLKNMSLQCVDFARPREAVDLAEAAVASARRATGRVAAMLQMRR HHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAHAALGEASACAQALACAEAAFVEARAEDPAWSAYFDDAEYQAQVGSCYIDLGHLVHA HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHEEEHHHHHHH DRWLEGSLAIHPHERTRDRATYLLRRAAVQIDLGNLDGGCSLAKEALPMLEATRSKRNSR HHHCCCCEEECCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC RADEVRRRLRRHSSDPAARELDQVLARTA CHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123814 [H]