Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is gpmA [H]

Identifier: 158317890

GI number: 158317890

Start: 7480340

End: 7481077

Strand: Reverse

Name: gpmA [H]

Synonym: Franean1_6148

Alternate gene names: 158317890

Gene position: 7481077-7480340 (Counterclockwise)

Preceding gene: 158317893

Following gene: 158317888

Centisome position: 83.29

GC content: 70.6

Gene sequence:

>738_bases
ATGCCGACGCTCGTCCTGCTCCGCCACGGCGAGAGCACGTGGAACCGTGAGAACCTGTTCACCGGCTGGGTGGACGTCGA
TCTGTCCGAGAAGGGCCTCAAGGAGGCCACGCGCGGCGGGGAGCTGCTCCAGGAGGCGGGCGTCCTGCCCGACGTGGTGC
ACACCTCGCTGCTCACCCGGGCCATCCGCACCGCGTGGCTCGCCCTGGACGCGGCCGGCCGCACCTGGGTGCCGGTGCGC
CGCAGCTGGCGTCTCAACGAGCGGCACTACGGCGGCCTGCAGGGGCTGAACAAGGCGGAGACCCTGGCGAAGTTCGGCGA
CGAGCAGTTCCTGCTCTGGCGCCGCTCCTACGACACGCCGCCGCCGCCCATCGAGCCGGGCCAGCCGAGCGGCGTCGACG
AGCGGTACGCCGACCTCGCTCCCGATGTGATCCCGCTCACCGAATGCCTGCGCGACGTCGTTGTCCGGATGCTGCCCTAC
TGGTATGACTCGATCGTCCCGGACCTGCGCTCCGGCGCGACGGTGCTCGTCACGGCGCACGGGAACTCGCTGCGGGCGCT
GGTCAAGCACCTCGACGGGATCTCCGACACCGACATCGCGAACCTGAACATCCCGACCGGCATCCCGCTGCGCTACGAGC
TGGACGACGATCTCAAGGTGCTGGACTCGGGCTATCTCGACCCGGCCGCGGCGGAGACCGCCGCCGCGGCCGTCGCGGCT
CAGGGCAAGAAGAAGTAG

Upstream 100 bases:

>100_bases
TGCGGGGCGGAGCACCCGGGGGTCGCTGCGTTCCCGGCGGTGCGTGTGGACCAGCGGAGGACACTGGCCGAGTACCGGGC
CGAGCGGGCAGGATTCACCT

Downstream 100 bases:

>100_bases
TCGCCGGGCGGGCGGCACGGGCCGCGGCGCGGCGGGACACCGGGCGGTGCGGGCGGGTGGCCGAAGGCTGGGAGCTGGCA
GCCGAGCGCGGGGGCCGAGC

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPTLVLLRHGESTWNRENLFTGWVDVDLSEKGLKEATRGGELLQEAGVLPDVVHTSLLTRAIRTAWLALDAAGRTWVPVR
RSWRLNERHYGGLQGLNKAETLAKFGDEQFLLWRRSYDTPPPPIEPGQPSGVDERYADLAPDVIPLTECLRDVVVRMLPY
WYDSIVPDLRSGATVLVTAHGNSLRALVKHLDGISDTDIANLNIPTGIPLRYELDDDLKVLDSGYLDPAAAETAAAAVAA
QGKKK

Sequences:

>Translated_245_residues
MPTLVLLRHGESTWNRENLFTGWVDVDLSEKGLKEATRGGELLQEAGVLPDVVHTSLLTRAIRTAWLALDAAGRTWVPVR
RSWRLNERHYGGLQGLNKAETLAKFGDEQFLLWRRSYDTPPPPIEPGQPSGVDERYADLAPDVIPLTECLRDVVVRMLPY
WYDSIVPDLRSGATVLVTAHGNSLRALVKHLDGISDTDIANLNIPTGIPLRYELDDDLKVLDSGYLDPAAAETAAAAVAA
QGKKK
>Mature_244_residues
PTLVLLRHGESTWNRENLFTGWVDVDLSEKGLKEATRGGELLQEAGVLPDVVHTSLLTRAIRTAWLALDAAGRTWVPVRR
SWRLNERHYGGLQGLNKAETLAKFGDEQFLLWRRSYDTPPPPIEPGQPSGVDERYADLAPDVIPLTECLRDVVVRMLPYW
YDSIVPDLRSGATVLVTAHGNSLRALVKHLDGISDTDIANLNIPTGIPLRYELDDDLKVLDSGYLDPAAAETAAAAVAAQ
GKKK

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0588

COG function: function code G; Phosphoglycerate mutase 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]

Homologues:

Organism=Homo sapiens, GI50593010, Length=248, Percent_Identity=52.8225806451613, Blast_Score=273, Evalue=7e-74,
Organism=Homo sapiens, GI4505753, Length=248, Percent_Identity=55.241935483871, Blast_Score=255, Evalue=3e-68,
Organism=Homo sapiens, GI71274132, Length=248, Percent_Identity=53.2258064516129, Blast_Score=242, Evalue=2e-64,
Organism=Homo sapiens, GI4502445, Length=250, Percent_Identity=48, Blast_Score=242, Evalue=3e-64,
Organism=Homo sapiens, GI40353764, Length=250, Percent_Identity=48, Blast_Score=242, Evalue=3e-64,
Organism=Homo sapiens, GI310129614, Length=160, Percent_Identity=58.125, Blast_Score=171, Evalue=7e-43,
Organism=Escherichia coli, GI1786970, Length=228, Percent_Identity=54.3859649122807, Blast_Score=255, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6322697, Length=247, Percent_Identity=63.9676113360324, Blast_Score=301, Evalue=9e-83,
Organism=Saccharomyces cerevisiae, GI6320183, Length=296, Percent_Identity=33.445945945946, Blast_Score=163, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6324516, Length=293, Percent_Identity=32.7645051194539, Blast_Score=156, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24646216, Length=249, Percent_Identity=52.2088353413655, Blast_Score=259, Evalue=2e-69,
Organism=Drosophila melanogaster, GI85725270, Length=249, Percent_Identity=51.4056224899598, Blast_Score=235, Evalue=2e-62,
Organism=Drosophila melanogaster, GI85725272, Length=249, Percent_Identity=51.4056224899598, Blast_Score=235, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24650981, Length=249, Percent_Identity=51.4056224899598, Blast_Score=235, Evalue=2e-62,
Organism=Drosophila melanogaster, GI28571817, Length=217, Percent_Identity=40.5529953917051, Blast_Score=157, Evalue=6e-39,
Organism=Drosophila melanogaster, GI28571815, Length=217, Percent_Identity=40.5529953917051, Blast_Score=157, Evalue=6e-39,
Organism=Drosophila melanogaster, GI24648979, Length=217, Percent_Identity=40.5529953917051, Blast_Score=157, Evalue=7e-39,

Paralogues:

None

Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR005952 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 27026; Mature: 26895

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLVLLRHGESTWNRENLFTGWVDVDLSEKGLKEATRGGELLQEAGVLPDVVHTSLLTR
CCEEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AIRTAWLALDAAGRTWVPVRRSWRLNERHYGGLQGLNKAETLAKFGDEQFLLWRRSYDTP
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC
PPPIEPGQPSGVDERYADLAPDVIPLTECLRDVVVRMLPYWYDSIVPDLRSGATVLVTAH
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GNSLRALVKHLDGISDTDIANLNIPTGIPLRYELDDDLKVLDSGYLDPAAAETAAAAVAA
CCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHH
QGKKK
CCCCC
>Mature Secondary Structure 
PTLVLLRHGESTWNRENLFTGWVDVDLSEKGLKEATRGGELLQEAGVLPDVVHTSLLTR
CEEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AIRTAWLALDAAGRTWVPVRRSWRLNERHYGGLQGLNKAETLAKFGDEQFLLWRRSYDTP
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC
PPPIEPGQPSGVDERYADLAPDVIPLTECLRDVVVRMLPYWYDSIVPDLRSGATVLVTAH
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
GNSLRALVKHLDGISDTDIANLNIPTGIPLRYELDDDLKVLDSGYLDPAAAETAAAAVAA
CCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHH
QGKKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA