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The map label for this gene is gcvT [H]

Identifier: 158317892

GI number: 158317892

Start: 7481924

End: 7483153

Strand: Direct

Name: gcvT [H]

Synonym: Franean1_6150

Alternate gene names: 158317892

Gene position: 7481924-7483153 (Clockwise)

Preceding gene: 158317891

Following gene: 158317898

Centisome position: 83.3

GC content: 77.15

Gene sequence:

>1230_bases
ATGAGCACCGACACGCAGGCCCTCCGACCGGCACCGGCCCCGTCTCCGCTGCTCGCGCGGCCCGGAGCGGTCGCGGCCCC
CGAGCCGGACGCGACGGTCGCGGCCCACTACGGCGATCCGCTGCGCGAGCAGCGCCGGGCAGTCACCACCGCGGTGCTGG
TCGACCGCTCCAACCGCGGCGTGCTGCGCGTCACCGGTCCGGAGCGGCTCACCTGGCTGCACAGTCTGACCTCGCAGCAC
CTGTCGCAGCTGGCCCCGGGGCGAGGCACCGAGGCACTGGTGCTCTCCCCGCACGGCCACATCGAGCACCACCTGGTGCT
CGCCGACGACGGCACCGCCACCTGGATCGACGTCGAGCCCGGGAGCGCGCCGCGGCTGCTGTCCTTCCTGGAGTCGATGC
GGTTCATGCTCCGGGTCGAGCCGGGTGACGCCACGGCCGAGACGGCCGTCCTGTCGCTGCTCGGCCCGGGCGCGGCCGAC
GTCGCCCGGGCCGTGTTCGGGCCGTCCGCCGTCCCCGGCGAGGCAGGCGGCGGTCCTGCCGCGGGCACTGCCGCCGCGGG
CTCCCCCACCGCGGCCGGTGCCGTGACCACCGGCCCGTACCCGGTCACCCGCGCGGCGGCCACGACCGACCCGACCGCCA
CCGGCGCGGCCGTGGGCGGCCCGGCCCCCCTGATCCGCCGGATGCCCTACGGGCTGGACCTGCTGGTCGCACGCGCGGAT
CTCGCCACGATCGCCGACCAGCTGGTGGGCGCCGGAGCCACCCCGGCCGGCCTGAGCGCGTTCGAGGCGCTGCGGATCGC
CGCGCGCCGGCCGCGCCTGGGCCGGGAGACCGACCACCGCACCATCCCGCACGAGGTGGGGTGGCTGCCGGCTGCCGTGC
ACCTGGACAAGGGGTGCTACCGCGGCCAGGAGACCGTCGCCCGGGTGCACAACCTGGGTCGCCCGCCTCGGCGCATGGTG
CTGCTGCACCTGGACGGCGCCGTCGCGGCTCCGGGTACCCCGGTCACCTCGGGCGGTCGCGCGGTCGGCTTCGTCGGGGC
GTCCGAGATGCATCACGAGCTTGGCCCGATCGCGCTGGCCGTGGTGAAGCGCTCGCTTCCGGCGGACGCAGTGCTCGTCG
TCACCGACCCCGACGGCGCCCAGGTGGCGGCGACGATCGACCCCGAGGCCGGCCCGGAGCAGCCGACCCGTCCCGCGGGG
CGCCTGCTGCACCCGCACACCGGAGGCTGA

Upstream 100 bases:

>100_bases
GAGCTGCGCGCGGAGCTGGGCTTCACCGTCGACATGGATCACCTCACACTGGCGGGCCGGTGCGCGGAGTGCACAGCGGC
CGGAAGGCGTTAGACCTGGC

Downstream 100 bases:

>100_bases
CCGGCGGCCACCGCCCGCCTGTCCGGCGGCCGCCGGGATGACCGGCGGGCCGCCGGTTACTCAGGCCGTGCGGGCCAGTA
CCTGGTCGAGCTCACGCGCG

Product: glycine cleavage T protein (aminomethyl transferase)

Products: NA

Alternate protein names: Glycine cleavage system T protein [H]

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSTDTQALRPAPAPSPLLARPGAVAAPEPDATVAAHYGDPLREQRRAVTTAVLVDRSNRGVLRVTGPERLTWLHSLTSQH
LSQLAPGRGTEALVLSPHGHIEHHLVLADDGTATWIDVEPGSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAAD
VARAVFGPSAVPGEAGGGPAAGTAAAGSPTAAGAVTTGPYPVTRAAATTDPTATGAAVGGPAPLIRRMPYGLDLLVARAD
LATIADQLVGAGATPAGLSAFEALRIAARRPRLGRETDHRTIPHEVGWLPAAVHLDKGCYRGQETVARVHNLGRPPRRMV
LLHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALAVVKRSLPADAVLVVTDPDGAQVAATIDPEAGPEQPTRPAG
RLLHPHTGG

Sequences:

>Translated_409_residues
MSTDTQALRPAPAPSPLLARPGAVAAPEPDATVAAHYGDPLREQRRAVTTAVLVDRSNRGVLRVTGPERLTWLHSLTSQH
LSQLAPGRGTEALVLSPHGHIEHHLVLADDGTATWIDVEPGSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAAD
VARAVFGPSAVPGEAGGGPAAGTAAAGSPTAAGAVTTGPYPVTRAAATTDPTATGAAVGGPAPLIRRMPYGLDLLVARAD
LATIADQLVGAGATPAGLSAFEALRIAARRPRLGRETDHRTIPHEVGWLPAAVHLDKGCYRGQETVARVHNLGRPPRRMV
LLHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALAVVKRSLPADAVLVVTDPDGAQVAATIDPEAGPEQPTRPAG
RLLHPHTGG
>Mature_408_residues
STDTQALRPAPAPSPLLARPGAVAAPEPDATVAAHYGDPLREQRRAVTTAVLVDRSNRGVLRVTGPERLTWLHSLTSQHL
SQLAPGRGTEALVLSPHGHIEHHLVLADDGTATWIDVEPGSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAADV
ARAVFGPSAVPGEAGGGPAAGTAAAGSPTAAGAVTTGPYPVTRAAATTDPTATGAAVGGPAPLIRRMPYGLDLLVARADL
ATIADQLVGAGATPAGLSAFEALRIAARRPRLGRETDHRTIPHEVGWLPAAVHLDKGCYRGQETVARVHNLGRPPRRMVL
LHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALAVVKRSLPADAVLVVTDPDGAQVAATIDPEAGPEQPTRPAGR
LLHPHTGG

Specific function: The glycine cleavage system catalyzes the degradation of glycine [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcvT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013977
- InterPro:   IPR006222
- InterPro:   IPR006223
- InterPro:   IPR022903 [H]

Pfam domain/function: PF01571 GCV_T; PF08669 GCV_T_C [H]

EC number: =2.1.2.10 [H]

Molecular weight: Translated: 41851; Mature: 41720

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTQALRPAPAPSPLLARPGAVAAPEPDATVAAHYGDPLREQRRAVTTAVLVDRSNRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHEEEEEEECCCCC
VLRVTGPERLTWLHSLTSQHLSQLAPGRGTEALVLSPHGHIEHHLVLADDGTATWIDVEP
EEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECC
GSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAADVARAVFGPSAVPGEAGGGPA
CCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
AGTAAAGSPTAAGAVTTGPYPVTRAAATTDPTATGAAVGGPAPLIRRMPYGLDLLVARAD
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEHHHH
LATIADQLVGAGATPAGLSAFEALRIAARRPRLGRETDHRTIPHEVGWLPAAVHLDKGCY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCC
RGQETVARVHNLGRPPRRMVLLHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALA
CCHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH
VVKRSLPADAVLVVTDPDGAQVAATIDPEAGPEQPTRPAGRLLHPHTGG
HHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STDTQALRPAPAPSPLLARPGAVAAPEPDATVAAHYGDPLREQRRAVTTAVLVDRSNRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHEEEEEEECCCCC
VLRVTGPERLTWLHSLTSQHLSQLAPGRGTEALVLSPHGHIEHHLVLADDGTATWIDVEP
EEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECC
GSAPRLLSFLESMRFMLRVEPGDATAETAVLSLLGPGAADVARAVFGPSAVPGEAGGGPA
CCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
AGTAAAGSPTAAGAVTTGPYPVTRAAATTDPTATGAAVGGPAPLIRRMPYGLDLLVARAD
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEHHHH
LATIADQLVGAGATPAGLSAFEALRIAARRPRLGRETDHRTIPHEVGWLPAAVHLDKGCY
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCC
RGQETVARVHNLGRPPRRMVLLHLDGAVAAPGTPVTSGGRAVGFVGASEMHHELGPIALA
CCHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHH
VVKRSLPADAVLVVTDPDGAQVAATIDPEAGPEQPTRPAGRLLHPHTGG
HHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA