| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317898
Identifier: 158317898
GI number: 158317898
Start: 7489894
End: 7491201
Strand: Direct
Name: 158317898
Synonym: Franean1_6156
Alternate gene names: NA
Gene position: 7489894-7491201 (Clockwise)
Preceding gene: 158317892
Following gene: 158317899
Centisome position: 83.39
GC content: 74.62
Gene sequence:
>1308_bases ATGAGTGACCGCAGCGACGGCGACCGCGATGACAGCGGACGCCACGGCACCGGACCTGGTGGGCCCGCCCACCACCATGA CGGGGACGGACCTTCCGGCGGGCGGGACGAACTCGGCGACGACTGGGGCCGGGTGGATGCCGACGGCACCGTGTACCTGC GCACCGCCGACGGTGAGCGCGCGGTCGGCTCGTGGCGCGCGGGCAGCCCTGAGGAGGGCCTGGCCCACTTCCGCCGTCGC TACGACGACCTCCTCGCCGAGGTGGTGTTGTTGGAGCGGCGGCTGACGGTGAGCGGCGTCGACCCCGGCGGCATCGCCGG CAGCGCCCGCCGGCTGCGGGAGGGGCTGGCCCAGGCCTCGGTCGTCGGCGACGTCGACGCCCTGGCCGCGCGGCTCGACG CCGTCCTGGCGGCCACGGACACCCGCCGCACGGAGCTCGCCGCCGAGCGGGCCCGCCGGGTCGCCGCCGCGGTCACCGCC AAGGAGGAGCTGGTCACCGAGGCCGAGCAGCTCGCCCGCAGCTCCGAGTGGAAGGTGACGAGCGAGCGTTTCCGGACCAT CGGCGACGATTTCCGCGCGATCACCGGTGTCGACAAGCGGACCGACTCGGCGCTGTGGCGGCGGATCGCCGCGGCCCGCG ACGAGTTCACCCGCCGCCGCACCTCGCACTTCGCCGCGCTCGACACCCAGCGCACGCGCTCACGCGAGCGCAAGGAGGCG ATCATCGCCGAGGCCGTCGCGCTGGCGGACTCGACGGACTGGGGCCCGACGACCGCGCGGTACCGCGCGCTGATGGTCGA GTGGAAGGCGGCCGGCCGGGCCGCCAAGGACGTCGACGACGAGCTGTGGGCCCGGTTCCGGGCCGCGCAGGACGGCTTCT TCAGCCGGCGCAACGCCGTGAACGCCGAGCGCGACGCGGAGCAGATCGCCAACCAGGCCCGCAAGGAAGAGCTGCTCGTC GAGGCCGCCGCGCTCGATCCCGTCGACGTCGAGCGGTCGCTGCGCCGGTACCGCGAGATCCAGGAGCGCTGGGACGCGAT CGGCCGGGTGCCCCGCGAGGCGGTCGGCAGCCTGGAACGCCAGCTCAACGCCATCGGGGACAAGCTGCGCGATGCCTCCG ACGCCCGTTGGGACCGTCGTGACATCGCCGAGTCCCCGTTCCTGACGAAGCTGCGCGAGTCGGTGGCGAAGCTCGAGGCG AAGCTGGAGCGCGCCCGCGCCGCCGGCCGGGCCCGCGAGATCACCGAGACCGAGAACGCCCTCACGACCCAGCGCGCCTG GCTGGCGCAGGCCGAGAAGGGAAGCTGA
Upstream 100 bases:
>100_bases CGGCGAACCTCCTTCTTCATTCGATAGCCGCCAGCGGTCCCCTTCCGGCCGGATGCCTGCAACAATGACAGGCATCTTGA TGTCGATCTTCGGGAACGCG
Downstream 100 bases:
>100_bases CCGCGGCGCGCCGAATGACCCAACTGCGCTAACTGCCCGCTTGCCACAGCTAGCATCAGCCCGTATCGTCGACCTCCTCT TGACCGGTTGTTCCTGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSDRSDGDRDDSGRHGTGPGGPAHHHDGDGPSGGRDELGDDWGRVDADGTVYLRTADGERAVGSWRAGSPEEGLAHFRRR YDDLLAEVVLLERRLTVSGVDPGGIAGSARRLREGLAQASVVGDVDALAARLDAVLAATDTRRTELAAERARRVAAAVTA KEELVTEAEQLARSSEWKVTSERFRTIGDDFRAITGVDKRTDSALWRRIAAARDEFTRRRTSHFAALDTQRTRSRERKEA IIAEAVALADSTDWGPTTARYRALMVEWKAAGRAAKDVDDELWARFRAAQDGFFSRRNAVNAERDAEQIANQARKEELLV EAAALDPVDVERSLRRYREIQERWDAIGRVPREAVGSLERQLNAIGDKLRDASDARWDRRDIAESPFLTKLRESVAKLEA KLERARAAGRAREITETENALTTQRAWLAQAEKGS
Sequences:
>Translated_435_residues MSDRSDGDRDDSGRHGTGPGGPAHHHDGDGPSGGRDELGDDWGRVDADGTVYLRTADGERAVGSWRAGSPEEGLAHFRRR YDDLLAEVVLLERRLTVSGVDPGGIAGSARRLREGLAQASVVGDVDALAARLDAVLAATDTRRTELAAERARRVAAAVTA KEELVTEAEQLARSSEWKVTSERFRTIGDDFRAITGVDKRTDSALWRRIAAARDEFTRRRTSHFAALDTQRTRSRERKEA IIAEAVALADSTDWGPTTARYRALMVEWKAAGRAAKDVDDELWARFRAAQDGFFSRRNAVNAERDAEQIANQARKEELLV EAAALDPVDVERSLRRYREIQERWDAIGRVPREAVGSLERQLNAIGDKLRDASDARWDRRDIAESPFLTKLRESVAKLEA KLERARAAGRAREITETENALTTQRAWLAQAEKGS >Mature_434_residues SDRSDGDRDDSGRHGTGPGGPAHHHDGDGPSGGRDELGDDWGRVDADGTVYLRTADGERAVGSWRAGSPEEGLAHFRRRY DDLLAEVVLLERRLTVSGVDPGGIAGSARRLREGLAQASVVGDVDALAARLDAVLAATDTRRTELAAERARRVAAAVTAK EELVTEAEQLARSSEWKVTSERFRTIGDDFRAITGVDKRTDSALWRRIAAARDEFTRRRTSHFAALDTQRTRSRERKEAI IAEAVALADSTDWGPTTARYRALMVEWKAAGRAAKDVDDELWARFRAAQDGFFSRRNAVNAERDAEQIANQARKEELLVE AAALDPVDVERSLRRYREIQERWDAIGRVPREAVGSLERQLNAIGDKLRDASDARWDRRDIAESPFLTKLRESVAKLEAK LERARAAGRAREITETENALTTQRAWLAQAEKGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48200; Mature: 48068
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRSDGDRDDSGRHGTGPGGPAHHHDGDGPSGGRDELGDDWGRVDADGTVYLRTADGER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCC AVGSWRAGSPEEGLAHFRRRYDDLLAEVVLLERRLTVSGVDPGGIAGSARRLREGLAQAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH VVGDVDALAARLDAVLAATDTRRTELAAERARRVAAAVTAKEELVTEAEQLARSSEWKVT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SERFRTIGDDFRAITGVDKRTDSALWRRIAAARDEFTRRRTSHFAALDTQRTRSRERKEA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAEAVALADSTDWGPTTARYRALMVEWKAAGRAAKDVDDELWARFRAAQDGFFSRRNAV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCC NAERDAEQIANQARKEELLVEAAALDPVDVERSLRRYREIQERWDAIGRVPREAVGSLER CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QLNAIGDKLRDASDARWDRRDIAESPFLTKLRESVAKLEAKLERARAAGRAREITETENA HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTQRAWLAQAEKGS HHHHHHHHHHCCCCC >Mature Secondary Structure SDRSDGDRDDSGRHGTGPGGPAHHHDGDGPSGGRDELGDDWGRVDADGTVYLRTADGER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCC AVGSWRAGSPEEGLAHFRRRYDDLLAEVVLLERRLTVSGVDPGGIAGSARRLREGLAQAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH VVGDVDALAARLDAVLAATDTRRTELAAERARRVAAAVTAKEELVTEAEQLARSSEWKVT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SERFRTIGDDFRAITGVDKRTDSALWRRIAAARDEFTRRRTSHFAALDTQRTRSRERKEA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAEAVALADSTDWGPTTARYRALMVEWKAAGRAAKDVDDELWARFRAAQDGFFSRRNAV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCC NAERDAEQIANQARKEELLVEAAALDPVDVERSLRRYREIQERWDAIGRVPREAVGSLER CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QLNAIGDKLRDASDARWDRRDIAESPFLTKLRESVAKLEAKLERARAAGRAREITETENA HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTQRAWLAQAEKGS HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA