Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317861

Identifier: 158317861

GI number: 158317861

Start: 7447108

End: 7448136

Strand: Reverse

Name: 158317861

Synonym: Franean1_6119

Alternate gene names: NA

Gene position: 7448136-7447108 (Counterclockwise)

Preceding gene: 158317862

Following gene: 158317860

Centisome position: 82.92

GC content: 76.09

Gene sequence:

>1029_bases
ATGGGTGTCGTGGACGTCGTCACGGACGGCCCGCTGCTGCTGGCGGCGCCCGTCGCGGCCGCGGCGGGGCTGCTGTCCTT
CCTGTCGCCGTGCGTGCTGCCGCTGGTTCCCGGCTACCTGTCCTTCATCACCGGGTTGTCCGGCGAGGATCTCCAGCGCC
GTCCGGCGCAGACAGCCTCCGCCGGGTCCGCGGCGTTCGCCGGGTCCACGGGGTTCGCCGCGACCACGGAGCCGGGCGAG
CCCGCCGCCGCGCCGATGGCTGCCACCGGAGCGCCCGCGGCTGTCGGAGCGCCCGCCGCCGCAGGCGTGTCAGGCGCGGG
TGGCCCCGCGCGGGGGTCCGGTGCGTTGCCGGCCGTCGGCGTACCGCCGTCCGGCGGTGCTGCGGCGGCCGCCGGCGGGC
AGCCGTCCGCGCTGGTCCGGCGGCTGGGGGAGCTGCGCAGGGTCGGCCGGGTGACCGCTGGAACCGGGCTGTTCGTGCTC
GGTTTCAGCGTCGTGTTCGTGACGTACGGGGTGGCGTTCGGCGGCCTCGGCCAGTGGCTGAACCTGCACCAGGTCGGGCT
CAGCCAGGTGCTCGGTGTGGTCACGATCGTGATGGGGCTCGGCTTCGCCGGAGTGTTCTCCCAGATGTCCTGGGCCAACC
GGGAGTGGCGCTTCCACCGCCTGCCCAACCCCGGGCTGCTCGGCGCCCCCGCGCTGGGCGTGATGTTCGGTCTCGGCTGG
ACGCCGTGCATCGGCCCGACCCTGGCCGCCGTGCTGGGGCTCGCCGCGCAGAGCGCGACGGCCGGGCGCGGCGCGTTCCT
CTCCGCCATGTACTGCCTGGGGCTCGGGCTGCCCTTCCTGGCCGTCGGCCTGGCCTTCCGCCGCGCCGCCGGTGCCCTGC
GGGTGGTCCGCCGCCACGCCCGACTCCTCGCGCTGACCGGCGGCGCCCTGCTGGTGACGGTGGGCGTTCTGCAGCTCACC
GGAGCCTGGGCCGACCTTGTCGCCGAGCTGCGCCCCTACGCGCCCGGATTCTCGGAGACGCCCCTGTGA

Upstream 100 bases:

>100_bases
CGACGCGGACGGCCGCATCGCCGCCCGCTTCACCGGTGGCGTGCTGCCGGCGGAGCTGACCACCGTGCTCGAGCGGCTCC
GGACGGAGGTCTAGTTCCGG

Downstream 100 bases:

>100_bases
GCACACGTCCCACCGCGCCGTCAGGGCATGTCGACGGGCTGCGCCCGGACGATCCGACGGTCCTCGAGGCCCCGGAGGCG
TTCGACCCACCGGCTCCGCG

Product: cytochrome C biogenesis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGVVDVVTDGPLLLAAPVAAAAGLLSFLSPCVLPLVPGYLSFITGLSGEDLQRRPAQTASAGSAAFAGSTGFAATTEPGE
PAAAPMAATGAPAAVGAPAAAGVSGAGGPARGSGALPAVGVPPSGGAAAAAGGQPSALVRRLGELRRVGRVTAGTGLFVL
GFSVVFVTYGVAFGGLGQWLNLHQVGLSQVLGVVTIVMGLGFAGVFSQMSWANREWRFHRLPNPGLLGAPALGVMFGLGW
TPCIGPTLAAVLGLAAQSATAGRGAFLSAMYCLGLGLPFLAVGLAFRRAAGALRVVRRHARLLALTGGALLVTVGVLQLT
GAWADLVAELRPYAPGFSETPL

Sequences:

>Translated_342_residues
MGVVDVVTDGPLLLAAPVAAAAGLLSFLSPCVLPLVPGYLSFITGLSGEDLQRRPAQTASAGSAAFAGSTGFAATTEPGE
PAAAPMAATGAPAAVGAPAAAGVSGAGGPARGSGALPAVGVPPSGGAAAAAGGQPSALVRRLGELRRVGRVTAGTGLFVL
GFSVVFVTYGVAFGGLGQWLNLHQVGLSQVLGVVTIVMGLGFAGVFSQMSWANREWRFHRLPNPGLLGAPALGVMFGLGW
TPCIGPTLAAVLGLAAQSATAGRGAFLSAMYCLGLGLPFLAVGLAFRRAAGALRVVRRHARLLALTGGALLVTVGVLQLT
GAWADLVAELRPYAPGFSETPL
>Mature_341_residues
GVVDVVTDGPLLLAAPVAAAAGLLSFLSPCVLPLVPGYLSFITGLSGEDLQRRPAQTASAGSAAFAGSTGFAATTEPGEP
AAAPMAATGAPAAVGAPAAAGVSGAGGPARGSGALPAVGVPPSGGAAAAAGGQPSALVRRLGELRRVGRVTAGTGLFVLG
FSVVFVTYGVAFGGLGQWLNLHQVGLSQVLGVVTIVMGLGFAGVFSQMSWANREWRFHRLPNPGLLGAPALGVMFGLGWT
PCIGPTLAAVLGLAAQSATAGRGAFLSAMYCLGLGLPFLAVGLAFRRAAGALRVVRRHARLLALTGGALLVTVGVLQLTG
AWADLVAELRPYAPGFSETPL

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 33794; Mature: 33663

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVDVVTDGPLLLAAPVAAAAGLLSFLSPCVLPLVPGYLSFITGLSGEDLQRRPAQTAS
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCC
AGSAAFAGSTGFAATTEPGEPAAAPMAATGAPAAVGAPAAAGVSGAGGPARGSGALPAVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPPSGGAAAAAGGQPSALVRRLGELRRVGRVTAGTGLFVLGFSVVFVTYGVAFGGLGQWL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NLHQVGLSQVLGVVTIVMGLGFAGVFSQMSWANREWRFHRLPNPGLLGAPALGVMFGLGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCC
TPCIGPTLAAVLGLAAQSATAGRGAFLSAMYCLGLGLPFLAVGLAFRRAAGALRVVRRHA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RLLALTGGALLVTVGVLQLTGAWADLVAELRPYAPGFSETPL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GVVDVVTDGPLLLAAPVAAAAGLLSFLSPCVLPLVPGYLSFITGLSGEDLQRRPAQTAS
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCC
AGSAAFAGSTGFAATTEPGEPAAAPMAATGAPAAVGAPAAAGVSGAGGPARGSGALPAVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VPPSGGAAAAAGGQPSALVRRLGELRRVGRVTAGTGLFVLGFSVVFVTYGVAFGGLGQWL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NLHQVGLSQVLGVVTIVMGLGFAGVFSQMSWANREWRFHRLPNPGLLGAPALGVMFGLGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCC
TPCIGPTLAAVLGLAAQSATAGRGAFLSAMYCLGLGLPFLAVGLAFRRAAGALRVVRRHA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RLLALTGGALLVTVGVLQLTGAWADLVAELRPYAPGFSETPL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]