| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317860
Identifier: 158317860
GI number: 158317860
Start: 7444988
End: 7446679
Strand: Reverse
Name: 158317860
Synonym: Franean1_6118
Alternate gene names: NA
Gene position: 7446679-7444988 (Counterclockwise)
Preceding gene: 158317861
Following gene: 158317859
Centisome position: 82.91
GC content: 72.16
Gene sequence:
>1692_bases ATGCGTACCGCGCTGGTGCTGCTCTTCCTGCTCGCGCTGGCCGCGGTGCCCGGCTCGCTCATCCCCCAGCGCAACCTCAA CCCGATGAAGGTCGAGGAGTACTTCGCCGAGCACCCCACGCTCGCCCCCTGGCTCGACCGGTTCTCCGCCTTCCACGTCT TCGGCGCGCCCTGGTTCGCCGCGATCTACCTCCTGCTGTTCATCTCGCTGATCGGCTGTCTCTGGTCGCGGGTGCACTGG CACGCGCGGGCGTTGTTCACCGCCCCGCCGAAGGCGCCGGCCCGGCCGGGCCGGCTGCCCGGCGGCAGCACCTGGACGAG CCCGCTCGACGCCCCGGACGCCGTCGACCTGGCCCGTGGGGCGCTCCGCGGGCGGCGGTTCCGGGTGGCCGTCGCGCCTG GTGACGCCCGCCGTCCCGACGGCTCGCCGGACCACTCGGTCGCCGGGGAGAAGGGCTACCTGCGCGAGAGCGGCAACCTG GTGTTCCACCTGGCGCTCGTCGCGCTCCTCGCCGGGATGGGGCTGGGCTCGTGGTTCGGCTACCAGGGCACCGTCCTGGT CGTCACCGGCAACGGGTTCGCGAACACCCTGATCTCCTACGACCAGTACAGCGGCGGCGAGCTGGTGGACGCGGCCGGCC TGCCGCCGTTCTCGCTCACCCTCGACCAGTTCTCCGCCTCGTACCAGGACAACGGCCAGCCCGCGGACTTCCAAGCCGAC GTCTCGTACCAGTCGGACATCGGCTCGCCCGTGCGCACCGACACGATCCGGGTCAACCACCCGCTGCGGATCGGCAGCGC GAAGATCTACCTGATCGGTCACGGCTACGCGCCGCACTTCGTCCTGCGTGACCCCGCCGGCGCGGTCGTCTGGGAGTCCT ACGTGCCCTGCACGCCCCGGGACGGCATGTTCACCTCGACCTGCACGGTCAAGATCCCCGACACCGGCCTGCCGCCGGTG GGGGAGCGCCAGGAGCCGCAGCAGCTCGCGTTCAGCGGGGTGTTCACCCCGACCACCGTGCTGGACCCGGGGCACGGATA CGTCTCCACCTTTCCGGCGGCGCGGGCACCCGGGCTCACACTCACCGGGTTCGTCGGGAACCTGCACCTCAACGAGGGCA TCCCGCAGAACGTCTACGCCGTCGACACCCGGGACATGACCCAGTTCCCGATGACCGGGCCGGCCGGGGAGAAGCGGATC GCCCAGGTCGTCGCCCTGAACAACCCCGGGCAGCGGACGCTGACCGGCCTGCCGGGCGGCCTGTCGCTCGAGGTGGACGG CGTGCACGAGTTCGCCACGTTCCAGACCAAGTCGGACCCCTACAAGGGACTGGTGCTGGGGGCGTCCGTCGTCATCATTC TCGGCCTCGTCGCGAGCCTGCGGGTGCGGCGCCGCCGGGTGTGGGTGCGGGCGACCCCGCTGGACGGTGGCGGCAGCACG GTGGAGGTCGGCGGCCTCTCCAGATCGGACGCGCAGGGCTTCGCCGCCGAGCTGGCCGCCCTCAGCGAGGAGATCCGGCT CGACACCACCGAGGCCGAGGCCACCGCGGACGACACCACTGCGGACGACACCACTGCGGACGGGGCCGCCACGGGCGACA CCGCTGCGGACGGGGAGAAGCCGGCCGCTGCCATGCCGGCCGACCCGGTCACGAGCACGACCATCAGCGCCACCAGCGAA CGGGAGCCTTGA
Upstream 100 bases:
>100_bases TGGTTCCGCTGGTTTCGCGGGTGCAGCCGGTGCCGCCGGCGCAGGGCCGCGCGCCGCCTGGCTCGCGCTGCTGGTCCGGT CCTGGCGGCAGCTCACCAGC
Downstream 100 bases:
>100_bases TGCCGGTCAACGAAGGCATGGCCAATCTGTCCGACCTGCTGTTCGGGACGTCGGTCGCCGTCTACGCGGCGGGGATGCTC GGATACGCGGCCGAGTTCGC
Product: ResB family protein
Products: NA
Alternate protein names: Cytochrome C Biogenesis Membrane Protein; ResB Protein Required For Cytochrome C Biosynthesis; Cytochrome C Biogenesis Protein ResB; Integral Membrane Protein; ResB-Family Protein; ResB-Like Protein; Cytochrome C Biogenesis Protein; Heme Export Protein; Cytochrome C Assembly Protein; Integral Membrane Cytochrome Synthesis Protein; Resb Family Protein; Cytochrome C Biosynthesis Protein; Cytochrome Assembly Protein; Cytochrome C Biosynthesis Associated Protein; Conserved Transmembrane Protein
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MRTALVLLFLLALAAVPGSLIPQRNLNPMKVEEYFAEHPTLAPWLDRFSAFHVFGAPWFAAIYLLLFISLIGCLWSRVHW HARALFTAPPKAPARPGRLPGGSTWTSPLDAPDAVDLARGALRGRRFRVAVAPGDARRPDGSPDHSVAGEKGYLRESGNL VFHLALVALLAGMGLGSWFGYQGTVLVVTGNGFANTLISYDQYSGGELVDAAGLPPFSLTLDQFSASYQDNGQPADFQAD VSYQSDIGSPVRTDTIRVNHPLRIGSAKIYLIGHGYAPHFVLRDPAGAVVWESYVPCTPRDGMFTSTCTVKIPDTGLPPV GERQEPQQLAFSGVFTPTTVLDPGHGYVSTFPAARAPGLTLTGFVGNLHLNEGIPQNVYAVDTRDMTQFPMTGPAGEKRI AQVVALNNPGQRTLTGLPGGLSLEVDGVHEFATFQTKSDPYKGLVLGASVVIILGLVASLRVRRRRVWVRATPLDGGGST VEVGGLSRSDAQGFAAELAALSEEIRLDTTEAEATADDTTADDTTADGAATGDTAADGEKPAAAMPADPVTSTTISATSE REP
Sequences:
>Translated_563_residues MRTALVLLFLLALAAVPGSLIPQRNLNPMKVEEYFAEHPTLAPWLDRFSAFHVFGAPWFAAIYLLLFISLIGCLWSRVHW HARALFTAPPKAPARPGRLPGGSTWTSPLDAPDAVDLARGALRGRRFRVAVAPGDARRPDGSPDHSVAGEKGYLRESGNL VFHLALVALLAGMGLGSWFGYQGTVLVVTGNGFANTLISYDQYSGGELVDAAGLPPFSLTLDQFSASYQDNGQPADFQAD VSYQSDIGSPVRTDTIRVNHPLRIGSAKIYLIGHGYAPHFVLRDPAGAVVWESYVPCTPRDGMFTSTCTVKIPDTGLPPV GERQEPQQLAFSGVFTPTTVLDPGHGYVSTFPAARAPGLTLTGFVGNLHLNEGIPQNVYAVDTRDMTQFPMTGPAGEKRI AQVVALNNPGQRTLTGLPGGLSLEVDGVHEFATFQTKSDPYKGLVLGASVVIILGLVASLRVRRRRVWVRATPLDGGGST VEVGGLSRSDAQGFAAELAALSEEIRLDTTEAEATADDTTADDTTADGAATGDTAADGEKPAAAMPADPVTSTTISATSE REP >Mature_563_residues MRTALVLLFLLALAAVPGSLIPQRNLNPMKVEEYFAEHPTLAPWLDRFSAFHVFGAPWFAAIYLLLFISLIGCLWSRVHW HARALFTAPPKAPARPGRLPGGSTWTSPLDAPDAVDLARGALRGRRFRVAVAPGDARRPDGSPDHSVAGEKGYLRESGNL VFHLALVALLAGMGLGSWFGYQGTVLVVTGNGFANTLISYDQYSGGELVDAAGLPPFSLTLDQFSASYQDNGQPADFQAD VSYQSDIGSPVRTDTIRVNHPLRIGSAKIYLIGHGYAPHFVLRDPAGAVVWESYVPCTPRDGMFTSTCTVKIPDTGLPPV GERQEPQQLAFSGVFTPTTVLDPGHGYVSTFPAARAPGLTLTGFVGNLHLNEGIPQNVYAVDTRDMTQFPMTGPAGEKRI AQVVALNNPGQRTLTGLPGGLSLEVDGVHEFATFQTKSDPYKGLVLGASVVIILGLVASLRVRRRRVWVRATPLDGGGST VEVGGLSRSDAQGFAAELAALSEEIRLDTTEAEATADDTTADDTTADGAATGDTAADGEKPAAAMPADPVTSTTISATSE REP
Specific function: Unknown
COG id: COG1333
COG function: function code O; ResB protein required for cytochrome c biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59713; Mature: 59713
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTALVLLFLLALAAVPGSLIPQRNLNPMKVEEYFAEHPTLAPWLDRFSAFHVFGAPWFA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEEECCCHHHH AIYLLLFISLIGCLWSRVHWHARALFTAPPKAPARPGRLPGGSTWTSPLDAPDAVDLARG HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALRGRRFRVAVAPGDARRPDGSPDHSVAGEKGYLRESGNLVFHLALVALLAGMGLGSWFG HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCEEEHHHHHHHHHHCCCCCCCC YQGTVLVVTGNGFANTLISYDQYSGGELVDAAGLPPFSLTLDQFSASYQDNGQPADFQAD CCCEEEEEECCCHHHHHEECCCCCCCCEEECCCCCCCEEEHHHHHCCCCCCCCCCCEEEC VSYQSDIGSPVRTDTIRVNHPLRIGSAKIYLIGHGYAPHFVLRDPAGAVVWESYVPCTPR CCHHHHCCCCCCCCEEEECCCEEECCEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCC DGMFTSTCTVKIPDTGLPPVGERQEPQQLAFSGVFTPTTVLDPGHGYVSTFPAARAPGLT CCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCE LTGFVGNLHLNEGIPQNVYAVDTRDMTQFPMTGPAGEKRIAQVVALNNPGQRTLTGLPGG EEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEECCCCCC LSLEVDGVHEFATFQTKSDPYKGLVLGASVVIILGLVASLRVRRRRVWVRATPLDGGGST CEEEECCCCHHEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCE VEVGGLSRSDAQGFAAELAALSEEIRLDTTEAEATADDTTADDTTADGAATGDTAADGEK EEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAAMPADPVTSTTISATSEREP CCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MRTALVLLFLLALAAVPGSLIPQRNLNPMKVEEYFAEHPTLAPWLDRFSAFHVFGAPWFA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHEEECCCHHHH AIYLLLFISLIGCLWSRVHWHARALFTAPPKAPARPGRLPGGSTWTSPLDAPDAVDLARG HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALRGRRFRVAVAPGDARRPDGSPDHSVAGEKGYLRESGNLVFHLALVALLAGMGLGSWFG HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCEEEHHHHHHHHHHCCCCCCCC YQGTVLVVTGNGFANTLISYDQYSGGELVDAAGLPPFSLTLDQFSASYQDNGQPADFQAD CCCEEEEEECCCHHHHHEECCCCCCCCEEECCCCCCCEEEHHHHHCCCCCCCCCCCEEEC VSYQSDIGSPVRTDTIRVNHPLRIGSAKIYLIGHGYAPHFVLRDPAGAVVWESYVPCTPR CCHHHHCCCCCCCCEEEECCCEEECCEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCC DGMFTSTCTVKIPDTGLPPVGERQEPQQLAFSGVFTPTTVLDPGHGYVSTFPAARAPGLT CCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCE LTGFVGNLHLNEGIPQNVYAVDTRDMTQFPMTGPAGEKRIAQVVALNNPGQRTLTGLPGG EEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHEEEEEEECCCCCEEECCCCCC LSLEVDGVHEFATFQTKSDPYKGLVLGASVVIILGLVASLRVRRRRVWVRATPLDGGGST CEEEECCCCHHEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCE VEVGGLSRSDAQGFAAELAALSEEIRLDTTEAEATADDTTADDTTADGAATGDTAADGEK EEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAAMPADPVTSTTISATSEREP CCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA