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The map label for this gene is yigC [C]

Identifier: 158317857

GI number: 158317857

Start: 7441576

End: 7443090

Strand: Reverse

Name: yigC [C]

Synonym: Franean1_6115

Alternate gene names: 158317857

Gene position: 7443090-7441576 (Counterclockwise)

Preceding gene: 158317859

Following gene: 158317856

Centisome position: 82.87

GC content: 70.3

Gene sequence:

>1515_bases
TTGGAGCGCCCTGGGACAGGGTACGACCAGCGGCCCTTCGTCGGCGCTGCAAAGATGGACGCCATGGCCTGGGCCGATCT
CCGCGCGTTCCTCGCTCACCTCGACCGGAGCGGGGACCTTCGCCGGGTGCGGGTTCCCGTCGATCCCCGCCTGGAGGTGA
CCGAGATCGTCACCCGGGTCGTCCGCGAACGCGGCCCGGCACTGCTCTTCGACAAGCCCCTCGGTTCCGACATGCCGCTG
GCGATCAACGTGTTCGGCACCGAGGCCCGGATGGCCGCGGCGCTCGGCGTCGACCGCCTCGACGACGTCGGCACGCGCAT
CGGCGAGATGCTGCGCCCCGAGCTGCCAGTCGGCTTCGGCGGCCTGCGTGGCGCGCTCGGCAAGGCCGCGCAGCTCACCT
CCCTGCCGCCGCGCAAGGTCCGCACCGCTCCCTGCCAGGACGTCGTCCTCAAGGGCTCGGACGTCGACCTGAACCTGCTG
CCCGGCGTGCACGCCTGGCCGCGTGACGGCGGGCCGTTCCTCAACCTGGGGCTGACCCACACGAAGCATCCCGAGACCGG
GGCGCGCAACCTCGGCATGTACCGGCTGCAGCAGCACGACGCCCGCACCGTCGGCATGCACTGGCAGATCCACAAGGACT
CCAACGCCCACCACGCCGTCGCCGAGCGGCGCGGCGAGCGGCTGCCGGTCGCGATCGCGTTCGGCTGCGACCCCGCTGTC
ACCTACGCGGCGTCCGCCCCGCTGCCCGCCGAGATCGACGAGTACCTGTTCGCCGGCTTCCTGCGCCGCGAGCGCGTCGA
GATGGTCGACTGCCTGACCGTCCCGCTCCAGGTGCCGGCGAACGCCCAGGTCGTGCTCGAGGGCTGGCTCGAGCCCGGCG
AACGGCTGCCCGAAGGCCCCTTCGGAGACCACACCGGCTTCTACACGCCGATCGAGCCGTTCCCCGCGCTGCACGTCGAC
GTGATGACCATGCAGCGCGACCCGGTCTTCCAGAGCATCGTGGTCGGACGTCCACCGCAGGAGGACGGGCCGATGGGCAA
GGCGACCGAGCGCATCTTCCTGCCGCTGATCCGGATGATGATCCCCGAGATCGTCGACTACGACCTGCCCGAGGCCGGGG
TCTTCCACAACTGCGCGATCGTCTCGATCGAGAAGCGGTTCCCCAAGCACGCCCAGAAGGTGATGAACGCGGTCTGGGGC
GCGGGCCTGCTCTCGCTGTCGAAGCTGATCGTCGTCGTCGACGCCGACTGTGACGTCCACGACTACCACGAGGTCGCCTG
GCGGGCGTTCGGCAATGTGGACTACGCGCACGATCTGCTCACCACGGTGGGCCCGGTCGACCACCTCGACCACGCCTCCT
ACGAGCAGTTCTACGGCGGCAAGGTCGGGGTCGACGCGACCCGCAAGCTGCCCACCGAGGGATACCGGCGCGACGGCGGA
TGGCCCGAGGAGATCGTCATGGATGAGGCCGTCCGGGACAGGGTGACGCGTCGGTGGAAGGAGTACGGCCTGTGA

Upstream 100 bases:

>100_bases
AACGTCTCGTGTGTCCCTAGTGTGCCTCCCGGGTGGACGCCATGTCCCGGCGGTCCGCGAAGGCGCTGTTCACCGGTCGC
GAATGTGACGCGCCAGACGC

Downstream 100 bases:

>100_bases
GTGACGCCGCCTTCGCCCCAGGCATGCCCGGGCGGGCCTCCAGCGGGCCGACGCACGGCCCGGTCCGCGCGTTCCTGCGG
CTCGTCGTCATCGAGCACTC

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MERPGTGYDQRPFVGAAKMDAMAWADLRAFLAHLDRSGDLRRVRVPVDPRLEVTEIVTRVVRERGPALLFDKPLGSDMPL
AINVFGTEARMAAALGVDRLDDVGTRIGEMLRPELPVGFGGLRGALGKAAQLTSLPPRKVRTAPCQDVVLKGSDVDLNLL
PGVHAWPRDGGPFLNLGLTHTKHPETGARNLGMYRLQQHDARTVGMHWQIHKDSNAHHAVAERRGERLPVAIAFGCDPAV
TYAASAPLPAEIDEYLFAGFLRRERVEMVDCLTVPLQVPANAQVVLEGWLEPGERLPEGPFGDHTGFYTPIEPFPALHVD
VMTMQRDPVFQSIVVGRPPQEDGPMGKATERIFLPLIRMMIPEIVDYDLPEAGVFHNCAIVSIEKRFPKHAQKVMNAVWG
AGLLSLSKLIVVVDADCDVHDYHEVAWRAFGNVDYAHDLLTTVGPVDHLDHASYEQFYGGKVGVDATRKLPTEGYRRDGG
WPEEIVMDEAVRDRVTRRWKEYGL

Sequences:

>Translated_504_residues
MERPGTGYDQRPFVGAAKMDAMAWADLRAFLAHLDRSGDLRRVRVPVDPRLEVTEIVTRVVRERGPALLFDKPLGSDMPL
AINVFGTEARMAAALGVDRLDDVGTRIGEMLRPELPVGFGGLRGALGKAAQLTSLPPRKVRTAPCQDVVLKGSDVDLNLL
PGVHAWPRDGGPFLNLGLTHTKHPETGARNLGMYRLQQHDARTVGMHWQIHKDSNAHHAVAERRGERLPVAIAFGCDPAV
TYAASAPLPAEIDEYLFAGFLRRERVEMVDCLTVPLQVPANAQVVLEGWLEPGERLPEGPFGDHTGFYTPIEPFPALHVD
VMTMQRDPVFQSIVVGRPPQEDGPMGKATERIFLPLIRMMIPEIVDYDLPEAGVFHNCAIVSIEKRFPKHAQKVMNAVWG
AGLLSLSKLIVVVDADCDVHDYHEVAWRAFGNVDYAHDLLTTVGPVDHLDHASYEQFYGGKVGVDATRKLPTEGYRRDGG
WPEEIVMDEAVRDRVTRRWKEYGL
>Mature_504_residues
MERPGTGYDQRPFVGAAKMDAMAWADLRAFLAHLDRSGDLRRVRVPVDPRLEVTEIVTRVVRERGPALLFDKPLGSDMPL
AINVFGTEARMAAALGVDRLDDVGTRIGEMLRPELPVGFGGLRGALGKAAQLTSLPPRKVRTAPCQDVVLKGSDVDLNLL
PGVHAWPRDGGPFLNLGLTHTKHPETGARNLGMYRLQQHDARTVGMHWQIHKDSNAHHAVAERRGERLPVAIAFGCDPAV
TYAASAPLPAEIDEYLFAGFLRRERVEMVDCLTVPLQVPANAQVVLEGWLEPGERLPEGPFGDHTGFYTPIEPFPALHVD
VMTMQRDPVFQSIVVGRPPQEDGPMGKATERIFLPLIRMMIPEIVDYDLPEAGVFHNCAIVSIEKRFPKHAQKVMNAVWG
AGLLSLSKLIVVVDADCDVHDYHEVAWRAFGNVDYAHDLLTTVGPVDHLDHASYEQFYGGKVGVDATRKLPTEGYRRDGG
WPEEIVMDEAVRDRVTRRWKEYGL

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=493, Percent_Identity=39.7565922920893, Blast_Score=373, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6320748, Length=516, Percent_Identity=23.8372093023256, Blast_Score=94, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55884; Mature: 55884

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERPGTGYDQRPFVGAAKMDAMAWADLRAFLAHLDRSGDLRRVRVPVDPRLEVTEIVTRV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHH
VRERGPALLFDKPLGSDMPLAINVFGTEARMAAALGVDRLDDVGTRIGEMLRPELPVGFG
HHHCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
GLRGALGKAAQLTSLPPRKVRTAPCQDVVLKGSDVDLNLLPGVHAWPRDGGPFLNLGLTH
HHHHHHCCHHHHCCCCCHHCCCCCCHHHEEECCCCCEEECCCCCCCCCCCCCEEEECCCC
TKHPETGARNLGMYRLQQHDARTVGMHWQIHKDSNAHHAVAERRGERLPVAIAFGCDPAV
CCCCCCCCCCCCHHHHHHCCCEEECEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHH
TYAASAPLPAEIDEYLFAGFLRRERVEMVDCLTVPLQVPANAQVVLEGWLEPGERLPEGP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCHHCCCCCC
FGDHTGFYTPIEPFPALHVDVMTMQRDPVFQSIVVGRPPQEDGPMGKATERIFLPLIRMM
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
IPEIVDYDLPEAGVFHNCAIVSIEKRFPKHAQKVMNAVWGAGLLSLSKLIVVVDADCDVH
HHHHHCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCH
DYHEVAWRAFGNVDYAHDLLTTVGPVDHLDHASYEQFYGGKVGVDATRKLPTEGYRRDGG
HHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCC
WPEEIVMDEAVRDRVTRRWKEYGL
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERPGTGYDQRPFVGAAKMDAMAWADLRAFLAHLDRSGDLRRVRVPVDPRLEVTEIVTRV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHH
VRERGPALLFDKPLGSDMPLAINVFGTEARMAAALGVDRLDDVGTRIGEMLRPELPVGFG
HHHCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
GLRGALGKAAQLTSLPPRKVRTAPCQDVVLKGSDVDLNLLPGVHAWPRDGGPFLNLGLTH
HHHHHHCCHHHHCCCCCHHCCCCCCHHHEEECCCCCEEECCCCCCCCCCCCCEEEECCCC
TKHPETGARNLGMYRLQQHDARTVGMHWQIHKDSNAHHAVAERRGERLPVAIAFGCDPAV
CCCCCCCCCCCCHHHHHHCCCEEECEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCHH
TYAASAPLPAEIDEYLFAGFLRRERVEMVDCLTVPLQVPANAQVVLEGWLEPGERLPEGP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCHHCCCCCC
FGDHTGFYTPIEPFPALHVDVMTMQRDPVFQSIVVGRPPQEDGPMGKATERIFLPLIRMM
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
IPEIVDYDLPEAGVFHNCAIVSIEKRFPKHAQKVMNAVWGAGLLSLSKLIVVVDADCDVH
HHHHHCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCH
DYHEVAWRAFGNVDYAHDLLTTVGPVDHLDHASYEQFYGGKVGVDATRKLPTEGYRRDGG
HHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCC
WPEEIVMDEAVRDRVTRRWKEYGL
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]