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The map label for this gene is ccsA [H]

Identifier: 158317859

GI number: 158317859

Start: 7443798

End: 7444988

Strand: Reverse

Name: ccsA [H]

Synonym: Franean1_6117

Alternate gene names: 158317859

Gene position: 7444988-7443798 (Counterclockwise)

Preceding gene: 158317860

Following gene: 158317857

Centisome position: 82.89

GC content: 72.12

Gene sequence:

>1191_bases
ATGCCGGTCAACGAAGGCATGGCCAATCTGTCCGACCTGCTGTTCGGGACGTCGGTCGCCGTCTACGCGGCGGGGATGCT
CGGATACGCGGCCGAGTTCGCGTTCAGCCGGCTCGGCACGCCGTCCGGGAAGGCCGCCACCGCAGACGGTGACGGGCAGC
TGGAGACCGCCGGCGAGGCCGGTGCGCAGGCCGAGAAGCAGGAGATCCTGGTCGGCGCCGCGACCTCCGCCCCCGGTACC
GCCGAGGCCGCCGGGGGCAGCATCGAGGCCGCCGGGAAGCCGGGCAGGCCCGCGAAGACGACGCGGGCAGGGGCGGGCGC
CGCGGGCCTGGCGGACGCGGCCGGAGGGGCCGCGGGCTCGGACGTCGCGGCGGGCGGTGGCGATGCCGCCGGATCCGGGT
TCGCGCCCTGGATCGGCCGGATCGCGGTGGTTCTGACGATCGTCGGCTGGGTGGCGCACGTCGGTTCGGCGGTCACCCGG
GCGATCGCGGCGAGCCGTGTCCCCTGGGGCAACATGTACGAGTTCTCGTCCATGATCTGCCTGATCGCGGTGACGACGTT
CCTGGCCCTGATGACCCGCCAGCAGATCCGGTGGCTCGGGGTCTTCGTGATGGTCCCGGTCGTGCTCTCCATGGGCTTCG
CCGGCACGGTCCTCTACGTCGCGGCGGGGCCGCTCGTCCCGGCGCTCAACTCGTACTGGCTGCGGATCCACGTCGCCGGG
GCGATCGTCGCCAGCGGTGTCTTCCTGGTGTCCGCCGTGACGACGGTCCTGTTCCTGCTGAAGGACCGCTGGGAGAACCG
GCTGGCCGAGGTGGCCTCCGGCCGTGCAGAGGCGTCGCGCGCCATGCGCAGCCGGGGCGGGATCGTGATGCGCCTGCCGT
CCTCGGCCACCCTCGACACGATCACCTACCGCGCGATCGCGTTCGCCTTCCCGATCTGGACGTTCGCCATCATCGCTGGG
GCGATCTGGGCCGAGGCGGCCTGGGGCCGCTACTGGGGCTGGGACCCGAAGGAGACCTGGTCCTTCATCACCTGGGTGAT
CTACGCGGCGTACCTGCACGCTCGCGCGACAGCCGGGTGGCGGGGACGGCGCGCGGCGGCGGTCTCACTGCTGGCCTTCA
GCGCGCTGTTCGTCGACTACTACCTGGTGAACCTGGTGATCAGCGGCCTGCACTCGTACGCCGGGGTCTGA

Upstream 100 bases:

>100_bases
CGGGCGACACCGCTGCGGACGGGGAGAAGCCGGCCGCTGCCATGCCGGCCGACCCGGTCACGAGCACGACCATCAGCGCC
ACCAGCGAACGGGAGCCTTG

Downstream 100 bases:

>100_bases
GGCGCCGGAGGTCAGCCGCGGGCGGGCGGCTCGGGCTCGCCGCCGCGGATGCGGTCGGCGAGCTCGCGAAGGAACTCGGG
GTCGTCGTCCGGGCCGACGG

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MPVNEGMANLSDLLFGTSVAVYAAGMLGYAAEFAFSRLGTPSGKAATADGDGQLETAGEAGAQAEKQEILVGAATSAPGT
AEAAGGSIEAAGKPGRPAKTTRAGAGAAGLADAAGGAAGSDVAAGGGDAAGSGFAPWIGRIAVVLTIVGWVAHVGSAVTR
AIAASRVPWGNMYEFSSMICLIAVTTFLALMTRQQIRWLGVFVMVPVVLSMGFAGTVLYVAAGPLVPALNSYWLRIHVAG
AIVASGVFLVSAVTTVLFLLKDRWENRLAEVASGRAEASRAMRSRGGIVMRLPSSATLDTITYRAIAFAFPIWTFAIIAG
AIWAEAAWGRYWGWDPKETWSFITWVIYAAYLHARATAGWRGRRAAAVSLLAFSALFVDYYLVNLVISGLHSYAGV

Sequences:

>Translated_396_residues
MPVNEGMANLSDLLFGTSVAVYAAGMLGYAAEFAFSRLGTPSGKAATADGDGQLETAGEAGAQAEKQEILVGAATSAPGT
AEAAGGSIEAAGKPGRPAKTTRAGAGAAGLADAAGGAAGSDVAAGGGDAAGSGFAPWIGRIAVVLTIVGWVAHVGSAVTR
AIAASRVPWGNMYEFSSMICLIAVTTFLALMTRQQIRWLGVFVMVPVVLSMGFAGTVLYVAAGPLVPALNSYWLRIHVAG
AIVASGVFLVSAVTTVLFLLKDRWENRLAEVASGRAEASRAMRSRGGIVMRLPSSATLDTITYRAIAFAFPIWTFAIIAG
AIWAEAAWGRYWGWDPKETWSFITWVIYAAYLHARATAGWRGRRAAAVSLLAFSALFVDYYLVNLVISGLHSYAGV
>Mature_395_residues
PVNEGMANLSDLLFGTSVAVYAAGMLGYAAEFAFSRLGTPSGKAATADGDGQLETAGEAGAQAEKQEILVGAATSAPGTA
EAAGGSIEAAGKPGRPAKTTRAGAGAAGLADAAGGAAGSDVAAGGGDAAGSGFAPWIGRIAVVLTIVGWVAHVGSAVTRA
IAASRVPWGNMYEFSSMICLIAVTTFLALMTRQQIRWLGVFVMVPVVLSMGFAGTVLYVAAGPLVPALNSYWLRIHVAGA
IVASGVFLVSAVTTVLFLLKDRWENRLAEVASGRAEASRAMRSRGGIVMRLPSSATLDTITYRAIAFAFPIWTFAIIAGA
IWAEAAWGRYWGWDPKETWSFITWVIYAAYLHARATAGWRGRRAAAVSLLAFSALFVDYYLVNLVISGLHSYAGV

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 41006; Mature: 40875

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVNEGMANLSDLLFGTSVAVYAAGMLGYAAEFAFSRLGTPSGKAATADGDGQLETAGEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCC
GAQAEKQEILVGAATSAPGTAEAAGGSIEAAGKPGRPAKTTRAGAGAAGLADAAGGAAGS
CCCHHHHHEEEEECCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
DVAAGGGDAAGSGFAPWIGRIAVVLTIVGWVAHVGSAVTRAIAASRVPWGNMYEFSSMIC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LIAVTTFLALMTRQQIRWLGVFVMVPVVLSMGFAGTVLYVAAGPLVPALNSYWLRIHVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCEEEEEEEHH
AIVASGVFLVSAVTTVLFLLKDRWENRLAEVASGRAEASRAMRSRGGIVMRLPSSATLDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCHHH
ITYRAIAFAFPIWTFAIIAGAIWAEAAWGRYWGWDPKETWSFITWVIYAAYLHARATAGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RGRRAAAVSLLAFSALFVDYYLVNLVISGLHSYAGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVNEGMANLSDLLFGTSVAVYAAGMLGYAAEFAFSRLGTPSGKAATADGDGQLETAGEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCC
GAQAEKQEILVGAATSAPGTAEAAGGSIEAAGKPGRPAKTTRAGAGAAGLADAAGGAAGS
CCCHHHHHEEEEECCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
DVAAGGGDAAGSGFAPWIGRIAVVLTIVGWVAHVGSAVTRAIAASRVPWGNMYEFSSMIC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LIAVTTFLALMTRQQIRWLGVFVMVPVVLSMGFAGTVLYVAAGPLVPALNSYWLRIHVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCEEEEEEEHH
AIVASGVFLVSAVTTVLFLLKDRWENRLAEVASGRAEASRAMRSRGGIVMRLPSSATLDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCHHH
ITYRAIAFAFPIWTFAIIAGAIWAEAAWGRYWGWDPKETWSFITWVIYAAYLHARATAGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RGRRAAAVSLLAFSALFVDYYLVNLVISGLHSYAGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]